RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 SF3B1O75533 1304 aaKnown RBP eCLIP8.57□□□□□ -1.048e-6■■■■■ 107
EPB41L1-201ENST00000202028 PCBP2Q15366 365 aaKnown RBP eCLIP8.21□□□□□ -1.094e-7■■■■■ 68.6
EPB41L1-201ENST00000202028 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.962e-6■■■■■ 53.5
EPB41L1-201ENST00000202028 DDX3XO00571 662 aaKnown RBP eCLIP9.15□□□□□ -0.945e-13■■■■■ 41.6
EPB41L1-201ENST00000202028 PTBP1P26599 531 aaKnown RBP eCLIP7.76□□□□□ -1.172e-14■■■■■ 40.1
EPB41L1-201ENST00000202028 RBFOX2O43251 390 aaKnown RBP eCLIP7.01□□□□□ -1.294e-12■■■■■ 36.8
EPB41L1-201ENST00000202028 RBM15Q96T37 977 aaKnown RBP eCLIP8.97□□□□□ -0.972e-6■■■■■ 33.2
EPB41L1-201ENST00000202028 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.543e-6■■■■■ 33.1
EPB41L1-201ENST00000202028 U2AF2P26368 475 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■■ 28.8
EPB41L1-201ENST00000202028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.951e-8■■■■■ 28
EPB41L1-201ENST00000202028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.98□□□□□ -0.979e-13■■■■□ 25.1
EPB41L1-201ENST00000202028 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.159e-6■■■■□ 24.9
EPB41L1-201ENST00000202028 HNRNPUQ00839 825 aaKnown RBP eCLIP11.82□□□□□ -0.526e-7■■■■□ 21.7
EPB41L1-201ENST00000202028 QKIQ96PU8 341 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■■■■□ 21.4
EPB41L1-201ENST00000202028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.17□□□□□ -1.19e-11■■■■□ 19.3
EPB41L1-201ENST00000202028 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.63□□□□□ -1.353e-7■■■□□ 16.2
EPB41L1-201ENST00000202028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.779e-7■■■□□ 15.7
EPB41L1-201ENST00000202028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.42□□□□□ -1.067e-7■■■□□ 15.2
EPB41L1-201ENST00000202028 YBX3P16989 372 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■□□ 15
EPB41L1-201ENST00000202028 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.391e-8■■□□□ 13.5
EPB41L1-201ENST00000202028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.456e-7■■□□□ 13.4
EPB41L1-201ENST00000202028 ILF3Q12906 894 aaKnown RBP eCLIP7.74□□□□□ -1.172e-13■■□□□ 12.2
EPB41L1-201ENST00000202028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.595e-7■■□□□ 12.1
EPB41L1-201ENST00000202028 SF3B4Q15427 424 aaKnown RBP eCLIP8.11□□□□□ -1.119e-6■□□□□ 11.2
EPB41L1-201ENST00000202028 PPIGQ13427 754 aaKnown RBP eCLIP8.21□□□□□ -1.11e-6■□□□□ 9.9
EPB41L1-201ENST00000202028 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.17□□□□□ -0.943e-6■□□□□ 9.4
EPB41L1-201ENST00000202028 NKRFO15226 690 aaKnown RBP eCLIP9.38□□□□□ -0.913e-6■□□□□ 8.9
EPB41L1-201ENST00000202028 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.935e-6■□□□□ 8.3
Retrieved 28 of 28 RNA–protein pairs in 36.1 ms