RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 GapdhsQ64467 440 aa20.82■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Thsd7aQ69ZU6 1645 aa20.82■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Mia2Q91ZV0 1396 aa20.82■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Trak1Q6PD31 939 aa20.81■□□□□ 0.92
Ldb3-207ENSMUST00000227819 PplQ9R269 1755 aa20.81■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Prrc2bQ7TPM1 1486 aaKnown RBP20.8■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Amigo3Q8C2S7 508 aa20.8■□□□□ 0.92
Ldb3-207ENSMUST00000227819 PtprgQ05909 1442 aa20.8■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Atp7aQ64430 1491 aa20.79■□□□□ 0.92
Ldb3-207ENSMUST00000227819 Lmtk3Q5XJV6 1424 aa20.78■□□□□ 0.92
Ldb3-207ENSMUST00000227819 PalldQ9ET54 1408 aa20.76■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Sall3Q62255 1320 aa20.75■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Asxl2Q8BZ32 1370 aa20.75■□□□□ 0.91
Ldb3-207ENSMUST00000227819 DnmbpQ6TXD4 1580 aa20.75■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Mroh1E0CZ22 1640 aa20.75■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Cdk13Q69ZA1 1511 aaKnown RBP20.74■□□□□ 0.91
Ldb3-207ENSMUST00000227819 ErbinQ80TH2 1402 aa20.74■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Abca8aQ8K442 1620 aa20.73■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Ehbp1l1Q99MS7 1716 aa20.73■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Mbd5B1AYB6 1498 aa20.72■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Col18a1P39061 1774 aa20.72■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Pik3c2gO70167 1506 aa20.71■□□□□ 0.91
Ldb3-207ENSMUST00000227819 Arhgef28P97433 1693 aa20.69■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Edc4Q3UJB9 1406 aaKnown RBP20.69■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Slit3Q9WVB4 1523 aa20.68■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Brinp3Q499E0 766 aa20.68■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Ankrd36D3Z4K0 1415 aa20.67■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Tom1O88746 492 aa20.66■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Tns3Q5SSZ5 1440 aa20.66■□□□□ 0.9
Ldb3-207ENSMUST00000227819 AatkQ80YE4 1365 aa20.66■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Evi5lH3BKQ3 813 aa20.65■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Atp1b4Q99ME6 356 aa20.65■□□□□ 0.9
Ldb3-207ENSMUST00000227819 Gimap5Q8BWF2 308 aa20.61■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Slain2Q8CI08 581 aa20.61■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Pik3c2aQ61194 1686 aa20.6■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Dhx9O70133 1380 aaKnown RBP20.59■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Mphosph9A6H5Y1 991 aa20.59■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Kif21bQ9QXL1 1668 aa20.59■□□□□ 0.89
Ldb3-207ENSMUST00000227819 Myom1Q62234 1667 aaKnown RBP20.58■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Q9D9H8 365 aa20.57■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Rprd2Q6NXI6 1469 aaKnown RBP20.57■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Arap3Q8R5G7 1538 aa20.57■□□□□ 0.88
Ldb3-207ENSMUST00000227819 AU022751B1B0V2 589 aa20.56■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Cypt1Q8CH20 168 aa20.55■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Ehmt2Q9Z148 1263 aaKnown RBP20.54■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Shq1Q7TMX5 569 aa20.53■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Fbln2P37889 1221 aa20.52■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Nyap1Q6PFX7 833 aa20.52■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Kif7B7ZNG0 1348 aa20.52■□□□□ 0.88
Ldb3-207ENSMUST00000227819 Tmem94Q7TSH8 1360 aa20.51■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Ttll13A4Q9F6 804 aa20.5■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Unc13bQ9Z1N9 1602 aa20.5■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Pik3r4Q8VD65 1358 aa20.5■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Plxnc1Q9QZC2 1574 aa20.49■□□□□ 0.87
Ldb3-207ENSMUST00000227819 HnrnpmQ9D0E1 729 aaKnown RBP20.49■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Dot1lQ6XZL8 1540 aa20.47■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Pkd2O35245 966 aa20.46■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Col14a1Q80X19 1797 aa20.46■□□□□ 0.87
Ldb3-207ENSMUST00000227819 Nwd1A6H603 1563 aa20.45■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Atf3Q60765 181 aa20.45■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Slc5a4bQ91ZP4 660 aa20.45■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Mroh3A0A1D5RM54 893 aa20.43■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Hdac5Q9Z2V6 1113 aa20.43■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Ift172Q6VH22 1749 aa20.43■□□□□ 0.86
Ldb3-207ENSMUST00000227819 NalcnQ8BXR5 1738 aa20.42■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Qtrt2B8ZXI1 415 aa20.42■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Slit2Q9R1B9 1521 aa20.42■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Cypt2Q6P924 180 aa20.41■□□□□ 0.86
Ldb3-207ENSMUST00000227819 Ppip5k1A2ARP1 1436 aa20.39■□□□□ 0.85
Ldb3-207ENSMUST00000227819 MaddQ80U28 1577 aa20.38■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Cps1Q8C196 1500 aa20.37■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Dapk1Q80YE7 1442 aa20.37■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Washc2Q6PGL7 1334 aa20.37■□□□□ 0.85
Ldb3-207ENSMUST00000227819 C3P01027 1663 aa20.35■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Sema6bO54951 886 aa20.34■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Rims1Q99NE5 1463 aa20.34■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Itsn2Q9Z0R6 1659 aa20.34■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Nhsl1Q8CAF4 1587 aa20.34■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Pik3c2bE9QAN8 1632 aa20.33■□□□□ 0.85
Ldb3-207ENSMUST00000227819 Kif20bQ80WE4 1774 aaKnown RBP20.33■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Stk26Q99JT2 416 aa20.32■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Rreb1Q3UH06 1700 aaKnown RBP20.32■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Zfp142G5E869 1843 aa20.32■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Tulp4Q9JIL5 1547 aa20.32■□□□□ 0.84
Ldb3-207ENSMUST00000227819 KdrP35918 1367 aa20.31■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Cntnap1O54991 1385 aa20.3■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Ccer2J3QPU5 274 aa20.29■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Utp14aQ640M1 767 aaKnown RBP20.29■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Fnbp4Q6ZQ03 1031 aa20.29■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Gm10563F6WIE4 79 aa20.28■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Adgrl1Q80TR1 1466 aa20.28■□□□□ 0.84
Ldb3-207ENSMUST00000227819 PtprvP70289 1705 aa20.27■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Kif24Q6NWW5 1356 aa20.27■□□□□ 0.84
Ldb3-207ENSMUST00000227819 Ddx17Q501J6 650 aaKnown RBP20.26■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Znf526Q8BI66 675 aa20.26■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Kdm2aP59997 1161 aa20.25■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Ybx3Q9JKB3 361 aaKnown RBP20.25■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Sipa1l2Q80TE4 1722 aa20.25■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Rock1P70335 1354 aa20.25■□□□□ 0.83
Ldb3-207ENSMUST00000227819 Ggt6Q6PDE7 497 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms