RNA–Protein interactions for RNA: ENSMUST00000173311.7

Chd1-205, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 4,211 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-205ENSMUST00000173311 OvosQ3UU35 1456 aa18.69■□□□□ 0.58
Chd1-205ENSMUST00000173311 Erich6bQ9D4S6 220 aa18.68■□□□□ 0.58
Chd1-205ENSMUST00000173311 Mbd3Q9Z2D8 285 aaKnown RBP18.68■□□□□ 0.58
Chd1-205ENSMUST00000173311 Myom3A2ABU4 1439 aa18.68■□□□□ 0.58
Chd1-205ENSMUST00000173311 Rapgef6Q5NCJ1 1609 aa18.67■□□□□ 0.58
Chd1-205ENSMUST00000173311 Prex2Q3LAC4 1598 aa18.67■□□□□ 0.58
Chd1-205ENSMUST00000173311 Liat1Q810M6 228 aa18.67■□□□□ 0.58
Chd1-205ENSMUST00000173311 Ttc21bQ0HA38 1315 aa18.67■□□□□ 0.58
Chd1-205ENSMUST00000173311 Ttll13A4Q9F6 804 aa18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 NudcO35685 332 aaKnown RBP18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 SlkO54988 1233 aa18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 Zscan10Q3URR7 782 aa18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 Kif7B7ZNG0 1348 aa18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 HdgfP51859 237 aaKnown RBP18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 Rusc2Q80U22 1514 aa18.66■□□□□ 0.58
Chd1-205ENSMUST00000173311 Rtf1A2AQ19 715 aaKnown RBP18.65■□□□□ 0.58
Chd1-205ENSMUST00000173311 Eif4g1Q6NZJ6 1600 aaKnown RBP18.65■□□□□ 0.58
Chd1-205ENSMUST00000173311 Mre11Q61216 706 aa18.64■□□□□ 0.58
Chd1-205ENSMUST00000173311 Unc13aQ4KUS2 1712 aa18.64■□□□□ 0.57
Chd1-205ENSMUST00000173311 Cluap1Q8R3P7 413 aa18.64■□□□□ 0.57
Chd1-205ENSMUST00000173311 Gsto1O09131 240 aa18.63■□□□□ 0.57
Chd1-205ENSMUST00000173311 Tsen2Q6P7W5 460 aa18.62■□□□□ 0.57
Chd1-205ENSMUST00000173311 Pcdh10E9PXQ7 1057 aa18.61■□□□□ 0.57
Chd1-205ENSMUST00000173311 Evi5lH3BKQ3 813 aa18.61■□□□□ 0.57
Chd1-205ENSMUST00000173311 Mapkbp1Q6NS57 1503 aa18.6■□□□□ 0.57
Chd1-205ENSMUST00000173311 Adgrl3Q80TS3 1537 aa18.6■□□□□ 0.57
Chd1-205ENSMUST00000173311 Gm21190A0A0G2JGJ6 266 aa18.6■□□□□ 0.57
Chd1-205ENSMUST00000173311 Eif4g3Q80XI3 1579 aaKnown RBP18.6■□□□□ 0.57
Chd1-205ENSMUST00000173311 Pdcl3Q8BVF2 240 aa18.6■□□□□ 0.57
Chd1-205ENSMUST00000173311 Mfap1aC0HKD8 439 aaKnown RBP18.58■□□□□ 0.57
Chd1-205ENSMUST00000173311 Mfap1bC0HKD9 439 aaKnown RBP18.58■□□□□ 0.57
Chd1-205ENSMUST00000173311 Ak7Q9D2H2 614 aa18.58■□□□□ 0.56
Chd1-205ENSMUST00000173311 Pibf1E9Q6K3 756 aa18.57■□□□□ 0.56
Chd1-205ENSMUST00000173311 Tmco5bQ80X59 307 aa18.57■□□□□ 0.56
Chd1-205ENSMUST00000173311 Arhgef12Q8R4H2 1543 aaKnown RBP18.57■□□□□ 0.56
Chd1-205ENSMUST00000173311 Tnnt1O88346 262 aa18.57■□□□□ 0.56
Chd1-205ENSMUST00000173311 Wdr7Q920I9 1489 aa18.56■□□□□ 0.56
Chd1-205ENSMUST00000173311 HnrnpmQ9D0E1 729 aaKnown RBP18.55■□□□□ 0.56
Chd1-205ENSMUST00000173311 PnisrA2AJT4 805 aaKnown RBP18.55■□□□□ 0.56
Chd1-205ENSMUST00000173311 Rrp12Q6P5B0 1295 aaKnown RBP18.55■□□□□ 0.56
Chd1-205ENSMUST00000173311 Rfx7F8VPJ6 1459 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 Esx1O88933 382 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 L3mbtl2P59178 703 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 CatipB9EKE5 520 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 Rpgrip1lQ8CG73 1264 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 Fyb1O35601 819 aa18.54■□□□□ 0.56
Chd1-205ENSMUST00000173311 AI481877A2ALV5 1481 aa18.53■□□□□ 0.56
Chd1-205ENSMUST00000173311 Tnnt2P50752 301 aa18.52■□□□□ 0.56
Chd1-205ENSMUST00000173311 Prkrip1Q9CWV6 186 aaKnown RBP18.52■□□□□ 0.56
Chd1-205ENSMUST00000173311 Q3TQI7 289 aaKnown RBP18.51■□□□□ 0.55
Chd1-205ENSMUST00000173311 GsdmaQ9EST1 446 aa18.51■□□□□ 0.55
Chd1-205ENSMUST00000173311 Ksr2Q3UVC0 959 aa18.5■□□□□ 0.55
Chd1-205ENSMUST00000173311 Atf3Q60765 181 aa18.5■□□□□ 0.55
Chd1-205ENSMUST00000173311 GphnQ8BUV3 769 aaKnown RBP18.5■□□□□ 0.55
Chd1-205ENSMUST00000173311 Rock1P70335 1354 aa18.49■□□□□ 0.55
Chd1-205ENSMUST00000173311 Znf330Q922H9 316 aa18.48■□□□□ 0.55
Chd1-205ENSMUST00000173311 Stk31Q99MW1 1018 aa18.48■□□□□ 0.55
Chd1-205ENSMUST00000173311 FanciQ8K368 1330 aa18.47■□□□□ 0.55
Chd1-205ENSMUST00000173311 Q8BT18 775 aa18.47■□□□□ 0.55
Chd1-205ENSMUST00000173311 GorabQ8BRM2 368 aa18.47■□□□□ 0.55
Chd1-205ENSMUST00000173311 Zfp444Q3TDV8 331 aaKnown RBP18.46■□□□□ 0.55
Chd1-205ENSMUST00000173311 Map7O88735 730 aa18.46■□□□□ 0.55
Chd1-205ENSMUST00000173311 Q7TT23 1179 aa18.45■□□□□ 0.54
Chd1-205ENSMUST00000173311 Arhgef40Q3UPH7 1517 aa18.45■□□□□ 0.54
Chd1-205ENSMUST00000173311 Pbrm1Q8BSQ9 1634 aaKnown RBP18.45■□□□□ 0.54
Chd1-205ENSMUST00000173311 Cdk19Q8BWD8 501 aa18.45■□□□□ 0.54
Chd1-205ENSMUST00000173311 Egfem1Q8C088 590 aa18.44■□□□□ 0.54
Chd1-205ENSMUST00000173311 Adamts12Q811B3 1600 aa18.44■□□□□ 0.54
Chd1-205ENSMUST00000173311 Slc52a2Q9D8F3 450 aa18.43■□□□□ 0.54
Chd1-205ENSMUST00000173311 Ylpm1Q9R0I7 1386 aaKnown RBP18.43■□□□□ 0.54
Chd1-205ENSMUST00000173311 Erich3F6QRE9 1637 aa18.42■□□□□ 0.54
Chd1-205ENSMUST00000173311 Kdm5bQ80Y84 1544 aa18.42■□□□□ 0.54
Chd1-205ENSMUST00000173311 KarsQ99MN1 595 aaKnown RBP18.41■□□□□ 0.54
Chd1-205ENSMUST00000173311 Rfx1P48377 963 aa18.4■□□□□ 0.54
Chd1-205ENSMUST00000173311 Abca5Q8K448 1642 aa18.4■□□□□ 0.54
Chd1-205ENSMUST00000173311 Ssh2Q5SW75 1423 aa18.39■□□□□ 0.53
Chd1-205ENSMUST00000173311 Adgrb2Q8CGM1 1561 aa18.39■□□□□ 0.53
Chd1-205ENSMUST00000173311 Adcy10Q8C0T9 1614 aa18.39■□□□□ 0.53
Chd1-205ENSMUST00000173311 TatQ8QZR1 454 aa18.38■□□□□ 0.53
Chd1-205ENSMUST00000173311 Ddrgk1Q80WW9 315 aa18.38■□□□□ 0.53
Chd1-205ENSMUST00000173311 Atp7aQ64430 1491 aa18.38■□□□□ 0.53
Chd1-205ENSMUST00000173311 Ddx54Q8K4L0 874 aaKnown RBP18.37■□□□□ 0.53
Chd1-205ENSMUST00000173311 Ccdc183A2AJB1 534 aa18.36■□□□□ 0.53
Chd1-205ENSMUST00000173311 VgfQ0VGU4 617 aa18.36■□□□□ 0.53
Chd1-205ENSMUST00000173311 Gtf2a1Q99PM3 378 aa18.36■□□□□ 0.53
Chd1-205ENSMUST00000173311 Rprd2Q6NXI6 1469 aaKnown RBP18.36■□□□□ 0.53
Chd1-205ENSMUST00000173311 Chmp4bQ9D8B3 224 aaKnown RBP18.36■□□□□ 0.53
Chd1-205ENSMUST00000173311 KnstrnQ9D9Z1 312 aaKnown RBP18.35■□□□□ 0.53
Chd1-205ENSMUST00000173311 Rrp9Q91WM3 475 aaKnown RBP18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 Ccar1Q8CH18 1146 aaKnown RBP18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 Sirt1Q923E4 737 aa18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 MsnP26041 577 aaKnown RBP18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 Ppp2r1aQ76MZ3 589 aa18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 Lmtk2Q3TYD6 1471 aa18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 PtprtQ99M80 1454 aa18.34■□□□□ 0.53
Chd1-205ENSMUST00000173311 4933402E13RikQ9D4D2 429 aa18.33■□□□□ 0.52
Chd1-205ENSMUST00000173311 Znf608Q56A10 1511 aa18.32■□□□□ 0.52
Chd1-205ENSMUST00000173311 Paxip1Q6NZQ4 1056 aa18.31■□□□□ 0.52
Chd1-205ENSMUST00000173311 Casc1Q6TDU8 730 aa18.31■□□□□ 0.52
Chd1-205ENSMUST00000173311 Pank1Q8K4K6 548 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms