RNA–Protein interactions for RNA: ENSMUST00000173311.7

Chd1-205, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

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Gene Chd1, Length 4,211 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-205ENSMUST00000173311 Rhox8Q6VSS7 320 aa26.76■■□□□ 1.87
Chd1-205ENSMUST00000173311 NischQ80TM9 1593 aa25.61■■□□□ 1.69
Chd1-205ENSMUST00000173311 Abcc9P70170 1546 aa24.41■■□□□ 1.5
Chd1-205ENSMUST00000173311 Rpgrip1Q9EPQ2 1331 aa24.34■■□□□ 1.49
Chd1-205ENSMUST00000173311 Ccdc136Q3TVA9 1136 aa24.27■■□□□ 1.48
Chd1-205ENSMUST00000173311 Ehmt2Q9Z148 1263 aaKnown RBP24.25■■□□□ 1.47
Chd1-205ENSMUST00000173311 Gm35339A0A140LHH9 1649 aa23.91■■□□□ 1.42
Chd1-205ENSMUST00000173311 Abcc8B2RUS7 1588 aa23.84■■□□□ 1.41
Chd1-205ENSMUST00000173311 Esf1Q3V1V3 845 aaKnown RBP23.82■■□□□ 1.4
Chd1-205ENSMUST00000173311 Cngb1E1AZ71 1325 aa23.66■■□□□ 1.38
Chd1-205ENSMUST00000173311 Trim41Q5NCC3 630 aa23.56■■□□□ 1.36
Chd1-205ENSMUST00000173311 Acin1Q9JIX8 1338 aaKnown RBP23.22■■□□□ 1.31
Chd1-205ENSMUST00000173311 Gab3Q8BSM5 595 aa23.21■■□□□ 1.31
Chd1-205ENSMUST00000173311 Zcchc6Q5BLK4 1491 aaKnown RBP23.18■■□□□ 1.3
Chd1-205ENSMUST00000173311 Las1lA2BE28 776 aaKnown RBP23.06■■□□□ 1.28
Chd1-205ENSMUST00000173311 Zeb1Q64318 1117 aa23.01■■□□□ 1.27
Chd1-205ENSMUST00000173311 Pcgf6Q99NA9 353 aa23■■□□□ 1.27
Chd1-205ENSMUST00000173311 Npm2Q80W85 207 aa22.91■■□□□ 1.26
Chd1-205ENSMUST00000173311 Myt1lP97500 1187 aa22.78■■□□□ 1.24
Chd1-205ENSMUST00000173311 Il27Q8K3I6 234 aa22.73■■□□□ 1.23
Chd1-205ENSMUST00000173311 Wdr66E9Q743 1299 aa22.67■■□□□ 1.22
Chd1-205ENSMUST00000173311 Supt5hO55201 1082 aaKnown RBP22.49■■□□□ 1.19
Chd1-205ENSMUST00000173311 Rb1cc1Q9ESK9 1588 aa22.44■■□□□ 1.18
Chd1-205ENSMUST00000173311 NacadQ5SWP3 1504 aa22.42■■□□□ 1.18
Chd1-205ENSMUST00000173311 Ccdc180J3QNE4 1664 aa22.42■■□□□ 1.18
Chd1-205ENSMUST00000173311 Rtl1Q7M732 1744 aa22.34■■□□□ 1.17
Chd1-205ENSMUST00000173311 HrcG5E8J6 738 aa22.34■■□□□ 1.17
Chd1-205ENSMUST00000173311 Ube2uB1AUC4 352 aa22.22■■□□□ 1.15
Chd1-205ENSMUST00000173311 CenpbP27790 599 aa22.17■■□□□ 1.14
Chd1-205ENSMUST00000173311 Kdm5dQ62240 1548 aa22.15■■□□□ 1.14
Chd1-205ENSMUST00000173311 Neurod1Q60867 357 aa22.08■■□□□ 1.12
Chd1-205ENSMUST00000173311 Npm1Q61937 292 aaKnown RBP22.02■■□□□ 1.12
Chd1-205ENSMUST00000173311 UbtfP25976 765 aaKnown RBP22.01■■□□□ 1.11
Chd1-205ENSMUST00000173311 NefmP08553 848 aa22.01■■□□□ 1.11
Chd1-205ENSMUST00000173311 Brd4Q9ESU6 1400 aaKnown RBP22.01■■□□□ 1.11
Chd1-205ENSMUST00000173311 Ubl4bQ9CQ84 188 aa21.99■■□□□ 1.11
Chd1-205ENSMUST00000173311 Ppargc1bQ8VHJ7 1014 aa21.97■■□□□ 1.11
Chd1-205ENSMUST00000173311 Baz1aO88379 1555 aa21.95■■□□□ 1.11
Chd1-205ENSMUST00000173311 Dcaf1Q80TR8 1506 aa21.89■■□□□ 1.09
Chd1-205ENSMUST00000173311 Ap3b1Q9Z1T1 1105 aa21.88■■□□□ 1.09
Chd1-205ENSMUST00000173311 Cdk11bP24788 784 aaKnown RBP21.85■■□□□ 1.09
Chd1-205ENSMUST00000173311 ScribQ80U72 1612 aa21.8■■□□□ 1.08
Chd1-205ENSMUST00000173311 Chic1Q8CBW7 227 aa21.74■■□□□ 1.07
Chd1-205ENSMUST00000173311 Nop58Q6DFW4 536 aaKnown RBP21.72■■□□□ 1.07
Chd1-205ENSMUST00000173311 Csrnp3P59055 597 aa21.65■■□□□ 1.06
Chd1-205ENSMUST00000173311 Myt1Q8CFC2 1127 aa21.64■■□□□ 1.05
Chd1-205ENSMUST00000173311 Gm38655A0A286YDK6 273 aa21.63■■□□□ 1.05
Chd1-205ENSMUST00000173311 Sycp2Q9CUU3 1500 aa21.59■■□□□ 1.05
Chd1-205ENSMUST00000173311 Pelp1Q9DBD5 1123 aaKnown RBP21.57■■□□□ 1.04
Chd1-205ENSMUST00000173311 Ifnlr1Q8CGK5 535 aa21.55■■□□□ 1.04
Chd1-205ENSMUST00000173311 Sall2Q9QX96 1004 aa21.55■■□□□ 1.04
Chd1-205ENSMUST00000173311 Mier1Q5UAK0 511 aa21.53■■□□□ 1.04
Chd1-205ENSMUST00000173311 Fam50aQ9WV03 339 aaKnown RBP21.49■■□□□ 1.03
Chd1-205ENSMUST00000173311 DiexfQ8BTT6 772 aaKnown RBP21.44■■□□□ 1.02
Chd1-205ENSMUST00000173311 Lmod2Q3UHZ5 550 aa21.42■■□□□ 1.02
Chd1-205ENSMUST00000173311 1700123L14RikQ3V2K7 440 aa21.4■■□□□ 1.02
Chd1-205ENSMUST00000173311 Ercc6F8VPZ5 1481 aa21.38■■□□□ 1.01
Chd1-205ENSMUST00000173311 Anks4bQ8K3X6 423 aa21.37■■□□□ 1.01
Chd1-205ENSMUST00000173311 Plekhg3Q4VAC9 1341 aa21.36■■□□□ 1.01
Chd1-205ENSMUST00000173311 Slc24a1Q91WD8 1130 aa21.36■■□□□ 1.01
Chd1-205ENSMUST00000173311 Kif15Q6P9L6 1387 aa21.36■■□□□ 1.01
Chd1-205ENSMUST00000173311 Ttbk1Q6PCN3 1308 aa21.35■■□□□ 1.01
Chd1-205ENSMUST00000173311 Cep164Q5DU05 1446 aa21.33■■□□□ 1
Chd1-205ENSMUST00000173311 Pds5bQ4VA53 1446 aaKnown RBP21.32■■□□□ 1
Chd1-205ENSMUST00000173311 Fkbp15Q6P9Q6 1216 aaKnown RBP21.31■■□□□ 1
Chd1-205ENSMUST00000173311 Golga3P55937 1487 aa21.29■■□□□ 1
Chd1-205ENSMUST00000173311 Rsf1E9PWW9 1441 aaKnown RBP21.27■■□□□ 1
Chd1-205ENSMUST00000173311 Amer1Q7TS75 1132 aa21.26■□□□□ 0.99
Chd1-205ENSMUST00000173311 Plppr3Q7TPB0 716 aa21.22■□□□□ 0.99
Chd1-205ENSMUST00000173311 Cecr2E9Q2Z1 1453 aa21.19■□□□□ 0.98
Chd1-205ENSMUST00000173311 Crybg2B7ZCC2 1516 aa21.17■□□□□ 0.98
Chd1-205ENSMUST00000173311 Aplp2Q06335 707 aa21.12■□□□□ 0.97
Chd1-205ENSMUST00000173311 Clip1Q922J3 1391 aa21.09■□□□□ 0.97
Chd1-205ENSMUST00000173311 ClspnQ80YR7 1315 aa21.08■□□□□ 0.96
Chd1-205ENSMUST00000173311 Tnnt3Q9QZ47 272 aa21.07■□□□□ 0.96
Chd1-205ENSMUST00000173311 TonslQ6NZL6 1363 aa21.07■□□□□ 0.96
Chd1-205ENSMUST00000173311 Zbtb7cQ8VCZ7 619 aa21.06■□□□□ 0.96
Chd1-205ENSMUST00000173311 Stra8P70278 393 aa21.05■□□□□ 0.96
Chd1-205ENSMUST00000173311 Dnajc5bQ9CQ94 199 aa21.03■□□□□ 0.96
Chd1-205ENSMUST00000173311 CftrP26361 1476 aa20.98■□□□□ 0.95
Chd1-205ENSMUST00000173311 Ccdc18Q640L5 1455 aa20.97■□□□□ 0.95
Chd1-205ENSMUST00000173311 Smarca2Q6DIC0 1577 aa20.97■□□□□ 0.95
Chd1-205ENSMUST00000173311 Atad2bE9Q166 1460 aaKnown RBP20.96■□□□□ 0.95
Chd1-205ENSMUST00000173311 Mapk8ip2Q9ERE9 830 aa20.93■□□□□ 0.94
Chd1-205ENSMUST00000173311 NclP09405 707 aaKnown RBP20.91■□□□□ 0.94
Chd1-205ENSMUST00000173311 Aebp2Q9Z248 504 aaKnown RBP20.89■□□□□ 0.93
Chd1-205ENSMUST00000173311 Eif5bQ05D44 1216 aaKnown RBP20.88■□□□□ 0.93
Chd1-205ENSMUST00000173311 Ccdc88bQ4QRL3 1481 aa20.87■□□□□ 0.93
Chd1-205ENSMUST00000173311 Hnrnpul2Q00PI9 745 aaKnown RBP20.86■□□□□ 0.93
Chd1-205ENSMUST00000173311 Smarca4Q3TKT4 1613 aaKnown RBP20.8■□□□□ 0.92
Chd1-205ENSMUST00000173311 Synj1Q8CHC4 1574 aa20.8■□□□□ 0.92
Chd1-205ENSMUST00000173311 Phldb1Q6PDH0 1371 aaKnown RBP20.79■□□□□ 0.92
Chd1-205ENSMUST00000173311 Setd5Q5XJV7 1441 aa20.79■□□□□ 0.92
Chd1-205ENSMUST00000173311 Os9Q8K2C7 672 aa20.77■□□□□ 0.91
Chd1-205ENSMUST00000173311 Eid3Q3V124 375 aa20.74■□□□□ 0.91
Chd1-205ENSMUST00000173311 Fam71e1A1L3C1 212 aa20.74■□□□□ 0.91
Chd1-205ENSMUST00000173311 Anp32aO35381 247 aa20.73■□□□□ 0.91
Chd1-205ENSMUST00000173311 Cux2P70298 1426 aa20.73■□□□□ 0.91
Chd1-205ENSMUST00000173311 BlmO88700 1416 aa20.73■□□□□ 0.91
Chd1-205ENSMUST00000173311 Fmn1Q05860 1466 aa20.69■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms