RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Smc5Q8CG46 1101 aaKnown RBP10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Sart1Q9Z315 806 aaKnown RBP10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Cux2P70298 1426 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Usp40Q8BWR4 1235 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Mical1Q8VDP3 1048 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Tpd52l1O54818 204 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Kif4P33174 1231 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 St18Q80TY4 1045 aa10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Tfip11Q9ERA6 838 aaKnown RBP10.26□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Babam1Q3UI43 333 aa10.25□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Cald1E9QA15 768 aaKnown RBP10.25□□□□□ -0.77
Smarca1-203ENSMUST00000101616 PnnO35691 725 aaKnown RBP10.25□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Clstn1Q9EPL2 979 aa10.25□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Q3TQI7 289 aaKnown RBP10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 PtprkP35822 1457 aa10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Kif3bQ61771 747 aa10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 MecomP14404 1042 aa10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Nkx1-2P42580 305 aa10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Kif18aQ91WD7 886 aa10.24□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Tdrd9Q14BI7 1383 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Dixdc1Q80Y83 711 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Arhgef5E9Q7D5 1581 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 SkilQ60665 675 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Top2aQ01320 1528 aaKnown RBP10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Kif20aP97329 887 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Cc2d2aQ8CFW7 1633 aa10.23□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Ttll5Q8CHB8 1328 aa10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Rtf1A2AQ19 715 aaKnown RBP10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Cspp1B2RX88 1205 aa10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Atp6v1dP57746 247 aa10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Cbx1P83917 185 aaKnown RBP10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Dusp27Q148W8 1138 aa10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Sh3bgrQ9WUZ7 214 aa10.22□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Calcoco2A2A6M5 331 aa10.21□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Arid3cA6PWV5 409 aa10.21□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Pnmal2G3X9N3 661 aa10.21□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Fez1Q8K0X8 392 aa10.21□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Atxn3Q9CVD2 355 aa10.21□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Frmd3Q8BHD4 595 aa10.21□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Taf3Q5HZG4 932 aa10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Olfml1Q8BSH2 233 aa10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Rbm25B2RY56 838 aaKnown RBP10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Syce3B5KM66 88 aa10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Anapc15P60007 132 aa10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Fam135aQ6NS59 1506 aa10.2□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Map7d2A2AG50 781 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Cgnl1Q6AW69 1298 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Fam43aQ8BUP8 424 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Mad1l1Q9WTX8 717 aaKnown RBP10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Ift140E9PY46 1464 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 AqrQ8CFQ3 1481 aaKnown RBP10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Ncoa1P70365 1447 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Fmnl2A2APV2 1086 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Smarce1O54941 411 aaKnown RBP10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Slc4a10Q5DTL9 1118 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Glipr1l2Q9CQ35 332 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Naip5Q9R016 1403 aa10.19□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Kank1E9Q238 1360 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Soga1E1U8D0 1418 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Ercc6F8VPZ5 1481 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Usp48Q3V0C5 1052 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Lamc3Q9R0B6 1581 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Catsper2A2ARP9 588 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Il4rP16382 810 aa10.18□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Vgll3P85442 326 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Drc7Q6V3W6 876 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Zkscan1Q8BGS3 561 aaKnown RBP10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 WrnO09053 1401 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Atad2bE9Q166 1460 aaKnown RBP10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Ric3Q8BPM6 367 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Podxl2Q8CAE9 603 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Rab3gap2Q8BMG7 1366 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 PrxO55103 1391 aa10.17□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Kif3aP28741 701 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 FosbP13346 338 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Isy1Q69ZQ2 285 aaKnown RBP10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Nap1l3Q794H2 544 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Usp16Q99LG0 825 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Ccer1Q9CQL2 403 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Zhx1P70121 873 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Cpa2Q504N0 417 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Bicd2Q921C5 820 aa10.16□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Znf326O88291 580 aa10.15□□□□□ -0.78
Smarca1-203ENSMUST00000101616 LrpprcQ6PB66 1392 aaKnown RBP10.15□□□□□ -0.78
Smarca1-203ENSMUST00000101616 Hmox1P14901 289 aa10.15□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Mink1Q9JM52 1308 aa10.15□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Terf2O35144 541 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Erbb3Q61526 1339 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 1700010I14RikQ7TPG0 532 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Smc3Q9CW03 1217 aaKnown RBP10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Tiam1Q60610 1591 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Cetn4Q8K4K1 168 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Serpina10Q8R121 448 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Aplp1Q03157 653 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Rbm27Q5SFM8 1060 aaKnown RBP10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Maco1Q7TQE6 664 aaKnown RBP10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 R3hcc1Q8BSI6 488 aa10.14□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Shroom4Q1W617 1475 aa10.13□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Efcab5A0JP43 1406 aa10.13□□□□□ -0.79
Smarca1-203ENSMUST00000101616 Ccdc173A0JLY1 547 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 232.9 ms