RNA–Protein interactions for RNA: ENSMUST00000090134.11

Pdlim5-203, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-203ENSMUST00000090134 Rprd2Q6NXI6 1469 aaKnown RBP10.4□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Mphosph9A6H5Y1 991 aa10.4□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Cabp1Q9JLK7 227 aa10.4□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Fam208aQ69ZR9 1610 aaKnown RBP10.4□□□□□ -0.74
Pdlim5-203ENSMUST00000090134 Pprc1Q6NZN1 1644 aa10.39□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 AlkP97793 1621 aa10.39□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Ccdc85aQ5SP85 500 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Neo1P97798 1493 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Fancd2Q80V62 1450 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Neurod2Q62414 383 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Pik3c2gO70167 1506 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Fmn2Q9JL04 1578 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Kiaa1210E9Q0C6 1637 aa10.38□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Fgd6Q69ZL1 1399 aa10.37□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Trpm2Q91YD4 1506 aa10.37□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Rab11fip3Q8CHD8 1047 aa10.36□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Neurl4Q5NCX5 1563 aa10.36□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Adgrb2Q8CGM1 1561 aa10.36□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Wdr7Q920I9 1489 aa10.36□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Chrm1P12657 460 aa10.36□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 DroshaQ5HZJ0 1373 aaKnown RBP10.35□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Noa1Q9JJG9 693 aaKnown RBP10.35□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Rnf17Q99MV7 1640 aa10.35□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Ildr2B5TVM2 661 aa10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Slc4a2P13808 1237 aaKnown RBP10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Ccdc69Q3TCJ8 202 aa10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Jph4Q80WT0 628 aa10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Npm3Q9CPP0 175 aaKnown RBP10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Mast1Q9R1L5 1570 aa10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 Adgrl2Q8JZZ7 1487 aa10.34□□□□□ -0.75
Pdlim5-203ENSMUST00000090134 MpndQ3TV65 487 aa10.33□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Pdcd11Q6NS46 1862 aaKnown RBP10.33□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Usp47Q8BY87 1376 aa10.33□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Gm32742A0A1B0GT42 1604 aa10.32□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Hecw1Q8K4P8 1604 aa10.32□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Cfap74Q3UY96 1578 aa10.32□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 NhsB1AV60 1647 aa10.31□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Pkd2O35245 966 aa10.31□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 DekQ7TNV0 380 aaKnown RBP10.31□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Kdm4aQ8BW72 1064 aa10.31□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 ChgaP26339 463 aaKnown RBP10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Supt6hQ62383 1726 aaKnown RBP10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Mbd5B1AYB6 1498 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Gm14025A2AP89 1413 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Arid4aF8VPQ2 1261 aaKnown RBP10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Vgll3P85442 326 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Tmco4Q91WU4 631 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Ak7Q9D2H2 614 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Hdac5Q9Z2V6 1113 aa10.3□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Tdrd9Q14BI7 1383 aa10.29□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Zfp644E9QA22 1323 aa10.28□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Ncoa1P70365 1447 aa10.28□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 AknaQ80VW7 1404 aa10.28□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Lrrc9Q8CDN9 1456 aa10.28□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Chd1P40201 1711 aa10.28□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Klhl34A2AI76 644 aa10.27□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Stra8P70278 393 aa10.27□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Spock2Q9ER58 423 aa10.27□□□□□ -0.76
Pdlim5-203ENSMUST00000090134 Kif14L0N7N1 1674 aaKnown RBP10.27□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 E2f4Q8R0K9 410 aa10.27□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Zfyve27Q3TXX3 415 aa10.26□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Abcc1O35379 1528 aa10.26□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Abca8bQ8K440 1620 aa10.25□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Arhgap5P97393 1501 aa10.25□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Smg6P61406 1418 aaKnown RBP10.25□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Abcc3B2RX12 1523 aa10.25□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Pitpnm1O35954 1243 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Gimap8Q75N62 688 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Nup155Q99P88 1391 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 PtprgQ05909 1442 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 CanxP35564 591 aaKnown RBP10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Ppm1gQ61074 542 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Jade2Q6ZQF7 829 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Fam117aQ7TNF9 451 aa10.24□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Hsp90aa1P07901 733 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Rbm27Q5SFM8 1060 aaKnown RBP10.23□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Tnnt3Q9QZ47 272 aa10.23□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Ttll5Q8CHB8 1328 aa10.23□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 PrimpolQ6P1E7 537 aa10.22□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Skor2A7M7C7 1008 aa10.21□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 1700122O11RikJ3QPW6 241 aa10.21□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Apbb1Q9QXJ1 710 aa10.21□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Dhx9O70133 1380 aaKnown RBP10.21□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Rock1P70335 1354 aa10.21□□□□□ -0.77
Pdlim5-203ENSMUST00000090134 Iqgap1Q9JKF1 1657 aaKnown RBP10.21□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Ssh2Q5SW75 1423 aa10.2□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Cpsf1Q9EPU4 1441 aaKnown RBP10.2□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Dot1lQ6XZL8 1540 aa10.2□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Mug2P28666 1451 aa10.2□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Spink5Q148R4 1017 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Trim35Q8C006 501 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Pip4p2Q9CZX7 257 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 4933402E13RikQ9D4D2 429 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Clstn2Q9ER65 966 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Naip6Q9JIB6 1403 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Csrnp3P59055 597 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Slc7a3P70423 618 aa10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Sin3aQ60520 1274 aaKnown RBP10.19□□□□□ -0.78
Pdlim5-203ENSMUST00000090134 Ppip5k1A2ARP1 1436 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms