Protein–RNA interactions for Protein: Q3TXX3

Zfyve27, Protrudin, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfyve27Q3TXX3 Gm25239-201ENSMUST00000174915 86 ntBASIC39.11■■■■□ 3.85
Zfyve27Q3TXX3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Zfyve27Q3TXX3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Zfyve27Q3TXX3 Gm24109-201ENSMUST00000175489 103 ntBASIC34.14■■■■□ 3.06
Zfyve27Q3TXX3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.71■■■□□ 2.99
Zfyve27Q3TXX3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Zfyve27Q3TXX3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33■■■□□ 2.87
Zfyve27Q3TXX3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Zfyve27Q3TXX3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.92■■■□□ 2.86
Zfyve27Q3TXX3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Zfyve27Q3TXX3 Gm23366-201ENSMUST00000175022 89 ntBASIC32.62■■■□□ 2.81
Zfyve27Q3TXX3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Zfyve27Q3TXX3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Zfyve27Q3TXX3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Zfyve27Q3TXX3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.98■■■□□ 2.71
Zfyve27Q3TXX3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Zfyve27Q3TXX3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Zfyve27Q3TXX3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
Zfyve27Q3TXX3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Zfyve27Q3TXX3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.63■■■□□ 2.65
Zfyve27Q3TXX3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Zfyve27Q3TXX3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Zfyve27Q3TXX3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Zfyve27Q3TXX3 Psd-208ENSMUST00000224556 2034 ntBASIC31.25■■■□□ 2.59
Zfyve27Q3TXX3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Zfyve27Q3TXX3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.1■■■□□ 2.57
Zfyve27Q3TXX3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Zfyve27Q3TXX3 Gm25238-201ENSMUST00000174914 89 ntBASIC31.05■■■□□ 2.56
Zfyve27Q3TXX3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Zfyve27Q3TXX3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
Zfyve27Q3TXX3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Zfyve27Q3TXX3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.44■■■□□ 2.46
Zfyve27Q3TXX3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Zfyve27Q3TXX3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
Zfyve27Q3TXX3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Zfyve27Q3TXX3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Zfyve27Q3TXX3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Zfyve27Q3TXX3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Zfyve27Q3TXX3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.08■■■□□ 2.41
Zfyve27Q3TXX3 Gm25262-201ENSMUST00000174934 133 ntBASIC29.97■■■□□ 2.39
Zfyve27Q3TXX3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.97■■■□□ 2.39
Zfyve27Q3TXX3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Zfyve27Q3TXX3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.82■■■□□ 2.36
Zfyve27Q3TXX3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Zfyve27Q3TXX3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Zfyve27Q3TXX3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Zfyve27Q3TXX3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Zfyve27Q3TXX3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Zfyve27Q3TXX3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.66■■■□□ 2.34
Zfyve27Q3TXX3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.66■■■□□ 2.34
Zfyve27Q3TXX3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Zfyve27Q3TXX3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Zfyve27Q3TXX3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Zfyve27Q3TXX3 Gm27325-201ENSMUST00000175467 74 ntBASIC29.5■■■□□ 2.31
Zfyve27Q3TXX3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.44■■■□□ 2.3
Zfyve27Q3TXX3 Gm26115-201ENSMUST00000175605 87 ntBASIC29.43■■■□□ 2.3
Zfyve27Q3TXX3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Zfyve27Q3TXX3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.4■■■□□ 2.3
Zfyve27Q3TXX3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Zfyve27Q3TXX3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Zfyve27Q3TXX3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Zfyve27Q3TXX3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.32■■■□□ 2.28
Zfyve27Q3TXX3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Zfyve27Q3TXX3 Rab21-202ENSMUST00000218831 843 ntBASIC29.27■■■□□ 2.28
Zfyve27Q3TXX3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Zfyve27Q3TXX3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.24■■■□□ 2.27
Zfyve27Q3TXX3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Zfyve27Q3TXX3 Gm8109-201ENSMUST00000194076 746 ntBASIC29.16■■■□□ 2.26
Zfyve27Q3TXX3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Zfyve27Q3TXX3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Zfyve27Q3TXX3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Zfyve27Q3TXX3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Zfyve27Q3TXX3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Zfyve27Q3TXX3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Zfyve27Q3TXX3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.97■■■□□ 2.23
Zfyve27Q3TXX3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Zfyve27Q3TXX3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Zfyve27Q3TXX3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Zfyve27Q3TXX3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Zfyve27Q3TXX3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.85■■■□□ 2.21
Zfyve27Q3TXX3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Zfyve27Q3TXX3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.75■■■□□ 2.19
Zfyve27Q3TXX3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Zfyve27Q3TXX3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.68■■■□□ 2.18
Zfyve27Q3TXX3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.66■■■□□ 2.18
Zfyve27Q3TXX3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Zfyve27Q3TXX3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Zfyve27Q3TXX3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Zfyve27Q3TXX3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Zfyve27Q3TXX3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.52■■■□□ 2.16
Zfyve27Q3TXX3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.52■■■□□ 2.16
Zfyve27Q3TXX3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
Zfyve27Q3TXX3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Zfyve27Q3TXX3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Zfyve27Q3TXX3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.45■■■□□ 2.15
Zfyve27Q3TXX3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Zfyve27Q3TXX3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.38■■■□□ 2.13
Zfyve27Q3TXX3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zfyve27Q3TXX3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zfyve27Q3TXX3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 316.4 ms