RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Ttc21bQ0HA38 1315 aa12.35□□□□□ -0.43
Usp28-201ENSMUST00000047349 Pola1P33609 1465 aa12.35□□□□□ -0.43
Usp28-201ENSMUST00000047349 Myo5cE9Q1F5 1742 aa12.35□□□□□ -0.43
Usp28-201ENSMUST00000047349 Fam184bQ0KK56 942 aa12.35□□□□□ -0.43
Usp28-201ENSMUST00000047349 L3mbtl2P59178 703 aa12.34□□□□□ -0.43
Usp28-201ENSMUST00000047349 Gtf2e1Q9D0D5 440 aa12.34□□□□□ -0.43
Usp28-201ENSMUST00000047349 Tex14Q7M6U3 1450 aa12.34□□□□□ -0.43
Usp28-201ENSMUST00000047349 Cep152A2AUM9 1736 aaKnown RBP12.33□□□□□ -0.43
Usp28-201ENSMUST00000047349 Slc4a1apE9PX68 744 aa12.33□□□□□ -0.44
Usp28-201ENSMUST00000047349 Rab3gap2Q8BMG7 1366 aa12.32□□□□□ -0.44
Usp28-201ENSMUST00000047349 Zfp444Q3TDV8 331 aaKnown RBP12.32□□□□□ -0.44
Usp28-201ENSMUST00000047349 OvosQ3UU35 1456 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Arid3cA6PWV5 409 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Q7TT23 1179 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Tcerg1Q8CGF7 1100 aaKnown RBP12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Mbd3Q9Z2D8 285 aaKnown RBP12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Abca9Q8K449 1623 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Gm16486A0A1D5RMD1 1434 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Itsn2Q9Z0R6 1659 aa12.31□□□□□ -0.44
Usp28-201ENSMUST00000047349 Stk24Q99KH8 431 aa12.3□□□□□ -0.44
Usp28-201ENSMUST00000047349 Mink1Q9JM52 1308 aa12.3□□□□□ -0.44
Usp28-201ENSMUST00000047349 Atf7ipQ7TT18 1306 aa12.3□□□□□ -0.44
Usp28-201ENSMUST00000047349 Ppp2r1aQ76MZ3 589 aa12.29□□□□□ -0.44
Usp28-201ENSMUST00000047349 Iqgap3F8VQ29 1632 aa12.29□□□□□ -0.44
Usp28-201ENSMUST00000047349 Nlrp6Q91WS2 869 aa12.29□□□□□ -0.44
Usp28-201ENSMUST00000047349 PtprtQ99M80 1454 aa12.28□□□□□ -0.44
Usp28-201ENSMUST00000047349 Depdc5P61460 1591 aa12.28□□□□□ -0.44
Usp28-201ENSMUST00000047349 Rad21Q61550 635 aaKnown RBP12.28□□□□□ -0.44
Usp28-201ENSMUST00000047349 Sall3Q62255 1320 aa12.27□□□□□ -0.44
Usp28-201ENSMUST00000047349 Abca6Q8K441 1624 aa12.27□□□□□ -0.44
Usp28-201ENSMUST00000047349 Usp40Q8BWR4 1235 aa12.27□□□□□ -0.45
Usp28-201ENSMUST00000047349 Nphp4P59240 1425 aa12.27□□□□□ -0.45
Usp28-201ENSMUST00000047349 Fndc1E9Q043 1732 aa12.27□□□□□ -0.45
Usp28-201ENSMUST00000047349 Topbp1Q6ZQF0 1515 aa12.26□□□□□ -0.45
Usp28-201ENSMUST00000047349 Tmem131lQ3U3D7 1597 aa12.26□□□□□ -0.45
Usp28-201ENSMUST00000047349 Rims1Q99NE5 1463 aa12.26□□□□□ -0.45
Usp28-201ENSMUST00000047349 Prkrip1Q9CWV6 186 aaKnown RBP12.26□□□□□ -0.45
Usp28-201ENSMUST00000047349 Atp10aO54827 1508 aa12.25□□□□□ -0.45
Usp28-201ENSMUST00000047349 Myom2Q14BI5 1463 aa12.25□□□□□ -0.45
Usp28-201ENSMUST00000047349 Fan1Q69ZT1 1020 aa12.25□□□□□ -0.45
Usp28-201ENSMUST00000047349 Efcab6Q6P1E8 1516 aa12.25□□□□□ -0.45
Usp28-201ENSMUST00000047349 Ttc41Q692V3 1318 aa12.25□□□□□ -0.45
Usp28-201ENSMUST00000047349 Abca8aQ8K442 1620 aa12.24□□□□□ -0.45
Usp28-201ENSMUST00000047349 Clasp1Q80TV8 1535 aaKnown RBP12.24□□□□□ -0.45
Usp28-201ENSMUST00000047349 Kdm5aQ3UXZ9 1690 aa12.24□□□□□ -0.45
Usp28-201ENSMUST00000047349 Gli2Q0VGT2 1544 aa12.24□□□□□ -0.45
Usp28-201ENSMUST00000047349 Kif16bB1AVY7 1312 aa12.23□□□□□ -0.45
Usp28-201ENSMUST00000047349 Kif7B7ZNG0 1348 aa12.23□□□□□ -0.45
Usp28-201ENSMUST00000047349 Adgrb3Q80ZF8 1522 aa12.23□□□□□ -0.45
Usp28-201ENSMUST00000047349 AatkQ80YE4 1365 aa12.23□□□□□ -0.45
Usp28-201ENSMUST00000047349 Pabpn1Q8CCS6 302 aaKnown RBP12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Esx1O88933 382 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Uggt1Q6P5E4 1551 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Prex1Q69ZK0 1650 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 TnikP83510 1323 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Erbb3Q61526 1339 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Col17a1Q07563 1470 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 IqubQ8CDK3 788 aa12.22□□□□□ -0.45
Usp28-201ENSMUST00000047349 Myo3aQ8K3H5 1613 aa12.21□□□□□ -0.45
Usp28-201ENSMUST00000047349 Talpid3E9PV87 1520 aa12.21□□□□□ -0.45
Usp28-201ENSMUST00000047349 Plekhh1Q80TI1 1356 aa12.21□□□□□ -0.45
Usp28-201ENSMUST00000047349 Puf60Q3UEB3 564 aaKnown RBP12.21□□□□□ -0.45
Usp28-201ENSMUST00000047349 Rwdd1Q9CQK7 243 aa12.21□□□□□ -0.45
Usp28-201ENSMUST00000047349 Akap12Q9WTQ5 1684 aa12.21□□□□□ -0.46
Usp28-201ENSMUST00000047349 Dcaf11Q91VU6 549 aa12.21□□□□□ -0.46
Usp28-201ENSMUST00000047349 Cdc42bpgQ80UW5 1551 aa12.21□□□□□ -0.46
Usp28-201ENSMUST00000047349 Tecpr2Q3UH45 1423 aa12.2□□□□□ -0.46
Usp28-201ENSMUST00000047349 Liat1Q810M6 228 aa12.2□□□□□ -0.46
Usp28-201ENSMUST00000047349 Ehbp1l1Q99MS7 1716 aa12.19□□□□□ -0.46
Usp28-201ENSMUST00000047349 DnmbpQ6TXD4 1580 aa12.19□□□□□ -0.46
Usp28-201ENSMUST00000047349 Stag3O70576 1240 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 CrbnQ8C7D2 445 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 Slc52a2Q9D8F3 450 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 Trpm1Q2TV84 1622 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 AglF8VPN4 1532 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 Gprasp1Q5U4C1 1347 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 Slc4a3P16283 1227 aa12.18□□□□□ -0.46
Usp28-201ENSMUST00000047349 Skint5A7XUY5 1461 aa12.17□□□□□ -0.46
Usp28-201ENSMUST00000047349 CenpjQ569L8 1344 aa12.17□□□□□ -0.46
Usp28-201ENSMUST00000047349 Golga2Q921M4 999 aa12.17□□□□□ -0.46
Usp28-201ENSMUST00000047349 Speer4f1Q9D5Q6 258 aa12.16□□□□□ -0.46
Usp28-201ENSMUST00000047349 Cdk5rap2Q8K389 1822 aa12.16□□□□□ -0.46
Usp28-201ENSMUST00000047349 PalldQ9ET54 1408 aa12.16□□□□□ -0.46
Usp28-201ENSMUST00000047349 InsrP15208 1372 aa12.16□□□□□ -0.46
Usp28-201ENSMUST00000047349 Eif2ak4Q9QZ05 1648 aa12.16□□□□□ -0.46
Usp28-201ENSMUST00000047349 Ralbp1Q62172 648 aa12.15□□□□□ -0.46
Usp28-201ENSMUST00000047349 Ipo9Q91YE6 1041 aa12.15□□□□□ -0.46
Usp28-201ENSMUST00000047349 Plxnc1Q9QZC2 1574 aa12.15□□□□□ -0.46
Usp28-201ENSMUST00000047349 Rsph4aQ8BYM7 716 aa12.15□□□□□ -0.46
Usp28-201ENSMUST00000047349 Ino80Q6ZPV2 1559 aa12.14□□□□□ -0.47
Usp28-201ENSMUST00000047349 Kcnh8P59111 1102 aa12.14□□□□□ -0.47
Usp28-201ENSMUST00000047349 KdrP35918 1367 aa12.14□□□□□ -0.47
Usp28-201ENSMUST00000047349 Ptch1Q61115 1434 aa12.13□□□□□ -0.47
Usp28-201ENSMUST00000047349 Pak3Q61036 559 aa12.13□□□□□ -0.47
Usp28-201ENSMUST00000047349 Zmym3Q9JLM4 1370 aa12.12□□□□□ -0.47
Usp28-201ENSMUST00000047349 Lrrc7Q80TE7 1490 aa12.12□□□□□ -0.47
Usp28-201ENSMUST00000047349 Ccdc30Q8BVF4 654 aa12.12□□□□□ -0.47
Usp28-201ENSMUST00000047349 Map4k4P97820 1233 aaKnown RBP12.11□□□□□ -0.47
Usp28-201ENSMUST00000047349 RereQ80TZ9 1558 aa12.11□□□□□ -0.47
Usp28-201ENSMUST00000047349 MaddQ80U28 1577 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 111.1 ms