RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Kiaa1551Q5DTW7 1521 aa10.68□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Pank3Q8R2W9 370 aa10.68□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Dbr1Q923B1 550 aa10.68□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Setd1aE9PYH6 1716 aa10.68□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Ccdc141E9Q8Q6 1531 aa10.67□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Kdm5cP41230 1554 aa10.67□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Iqgap1Q9JKF1 1657 aaKnown RBP10.67□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Kif16bB1AVY7 1312 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Esx1O88933 382 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Tubgcp6G5E8P0 1769 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Fam163aQ8CAA5 168 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Clstn2Q9ER65 966 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Tdrd9Q14BI7 1383 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Zmym3Q9JLM4 1370 aa10.66□□□□□ -0.7
Cdc40-201ENSMUST00000044166 PrxO55103 1391 aa10.65□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Inpp5dQ9ES52 1191 aa10.65□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Arhgap31A6X8Z5 1425 aa10.65□□□□□ -0.7
Cdc40-201ENSMUST00000044166 Abca16E9PWJ7 1678 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Dot1lQ6XZL8 1540 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Zscan10Q3URR7 782 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 CrbnQ8C7D2 445 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Gtf3c6Q9D8P7 227 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Mapk8ip3Q9ESN9 1337 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Mlh3A0A1Y7VMP7 1443 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Plekhh1Q80TI1 1356 aa10.64□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Tex14Q7M6U3 1450 aa10.63□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Spryd3E9Q9B3 442 aa10.63□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Magi1Q6RHR9 1471 aa10.63□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Tmf1B9EKI3 1091 aa10.63□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Smc5Q8CG46 1101 aaKnown RBP10.63□□□□□ -0.71
Cdc40-201ENSMUST00000044166 PtprgQ05909 1442 aa10.62□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Plch2A2AP18 1501 aa10.62□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Mapkbp1Q6NS57 1503 aa10.62□□□□□ -0.71
Cdc40-201ENSMUST00000044166 MpndQ3TV65 487 aa10.62□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Caskin1Q6P9K8 1431 aa10.62□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Ipo8Q7TMY7 1010 aa10.61□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Pdlim2Q8R1G6 349 aa10.61□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Shroom2A2ALU4 1481 aa10.61□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Paxip1Q6NZQ4 1056 aa10.61□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Eif4g3Q80XI3 1579 aaKnown RBP10.6□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Trim30dE9PWL0 497 aa10.6□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Fbxo2Q80UW2 297 aa10.6□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Apbb1Q9QXJ1 710 aa10.6□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Tarbp1E9Q368 1579 aa10.6□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Ifit1bl1D3Z6F0 470 aa10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Hsp90ab1P11499 724 aaKnown RBP10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Ppp2r1aQ76MZ3 589 aa10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Clasp1Q80TV8 1535 aaKnown RBP10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Setd1bQ8CFT2 1985 aa10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Tmc1Q8R4P5 757 aa10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Eif2s2Q99L45 331 aaKnown RBP10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Fmn2Q9JL04 1578 aa10.59□□□□□ -0.71
Cdc40-201ENSMUST00000044166 Ppp1r18Q8BQ30 594 aa10.58□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ak7Q9D2H2 614 aa10.58□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Mroh3A0A1D5RM54 893 aa10.58□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Htatsf1Q8BGC0 757 aa10.58□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Prex2Q3LAC4 1598 aa10.58□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Rrbp1Q99PL5 1605 aaKnown RBP10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Atf7ipQ7TT18 1306 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Dcaf11Q91VU6 549 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Speer4f1Q9D5Q6 258 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Rab3gap2Q8BMG7 1366 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Cd109Q8R422 1442 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Zhx1P70121 873 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Adgrl2Q8JZZ7 1487 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Erich6D3Z6S9 713 aa10.57□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Lrrc9Q8CDN9 1456 aa10.56□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Rrp7aQ9D1C9 280 aaKnown RBP10.56□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Sbno1Q689Z5 1390 aa10.56□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ppp6r1Q7TSI3 856 aa10.56□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Atp7aQ64430 1491 aa10.56□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Kcng1A2BDX4 514 aa10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ppp1r9bQ6R891 817 aaKnown RBP10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Dnajc14Q921R4 703 aa10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Gm14025A2AP89 1413 aa10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Nup160Q9Z0W3 1402 aaKnown RBP10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Mrc2Q64449 1479 aa10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ccdc30Q8BVF4 654 aa10.55□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ccdc183A2AJB1 534 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Plin1Q8CGN5 517 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ssh2Q5SW75 1423 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Fam184bQ0KK56 942 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Ppip5k1A2ARP1 1436 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Abcc2Q8VI47 1543 aa10.54□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Neurod2Q62414 383 aa10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Chmp4cQ9D7F7 232 aa10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Pbrm1Q8BSQ9 1634 aaKnown RBP10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Mroh2aD3Z750 1679 aa10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Nlrp6Q91WS2 869 aa10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Srcin1Q9QWI6 1250 aa10.53□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Trappc8E9PWG2 1437 aa10.52□□□□□ -0.72
Cdc40-201ENSMUST00000044166 Gm16486A0A1D5RMD1 1434 aa10.52□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Sparcl1P70663 650 aa10.51□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Nom1Q3UFM5 854 aaKnown RBP10.51□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Tspyl2Q7TQI8 677 aa10.51□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Tmed8Q3UHI4 326 aa10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Tex2Q6ZPJ0 1128 aaKnown RBP10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Gm6268A2A3U9 297 aa10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Erich4Q3UNU4 136 aa10.49□□□□□ -0.73
Cdc40-201ENSMUST00000044166 Ralbp1Q62172 648 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms