RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Carmil1Q6EDY6 1374 aa20.08■□□□□ 0.81
Ccdc88a-201ENSMUST00000040182 Ppp1r18Q8BQ30 594 aa20.08■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Ccdc146E9Q9F7 977 aa20.08■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 UvssaQ9D479 717 aa20.08■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Trim58Q5NCC9 485 aa20.07■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Erc2Q6PH08 957 aa20.07■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Mns1Q61884 491 aa20.07■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Bicd2Q921C5 820 aa20.07■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Cetn4Q8K4K1 168 aa20.07■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Ggt6Q6PDE7 497 aa20.06■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Wdr78E9PYY5 807 aa20.06■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 BccipQ9CWI3 316 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Cux2P70298 1426 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Tomm22Q9CPQ3 142 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 ChgaP26339 463 aaKnown RBP20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Lrrcc1Q69ZB0 1026 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Hoxa7P02830 229 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Slc4a1apE9PX68 744 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Ccdc60Q8C4J0 545 aa20.05■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Cabp1Q9JLK7 227 aa20.04■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Pknox2Q8BG99 474 aa20.04■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Plekhh1Q80TI1 1356 aa20.04■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Mical1Q8VDP3 1048 aa20.04■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Pnmal2G3X9N3 661 aa20.03■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Trim29Q8R2Q0 587 aa20.03■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Dixdc1Q80Y83 711 aa20.02■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 Drc7Q6V3W6 876 aa20.02■□□□□ 0.8
Ccdc88a-201ENSMUST00000040182 PdcQ9QW08 244 aa20.02■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Synj1Q8CHC4 1574 aa20.01■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 ScribQ80U72 1612 aa20.01■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Smc3Q9CW03 1217 aaKnown RBP20.01■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Q8BT18 775 aa20.01■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 AppP12023 770 aa20.01■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 GsdmaQ9EST1 446 aa20■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Cdkn1cP49919 348 aa20■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Psma5Q9Z2U1 241 aaKnown RBP20■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 G3bp1P97855 465 aaKnown RBP19.99■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Cep112Q5PR68 954 aa19.99■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Rrp9Q91WM3 475 aaKnown RBP19.99■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Smc2Q8CG48 1191 aaKnown RBP19.98■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Ppp4r3bQ922R5 820 aa19.98■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Mcm2P97310 904 aa19.98■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Sin3aQ60520 1274 aaKnown RBP19.97■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Dapk1Q80YE7 1442 aa19.97■□□□□ 0.79
Ccdc88a-201ENSMUST00000040182 Sox12Q04890 314 aa19.95■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Pank3Q8R2W9 370 aa19.95■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Rapgef2Q8CHG7 1496 aa19.95■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Arid4aF8VPQ2 1261 aaKnown RBP19.95■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Luc7lQ9CYI4 371 aaKnown RBP19.95■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Pibf1E9Q6K3 756 aa19.94■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Gps2Q921N8 327 aa19.94■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Ccdc171E9Q1U1 1324 aa19.94■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Gsdma3Q5Y4Y6 464 aa19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Dhx29Q6PGC1 1365 aaKnown RBP19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Fam193aQ8CGI1 1231 aaKnown RBP19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Pip4k2aO70172 405 aa19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 March6Q6ZQ89 909 aa19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Cfap99A0A140LIX9 648 aa19.93■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Ak7Q9D2H2 614 aa19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Kif3bQ61771 747 aa19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Chmp7Q8R1T1 451 aa19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 NexnQ7TPW1 607 aa19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Prkrip1Q9CWV6 186 aaKnown RBP19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Rfx1P48377 963 aa19.92■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 AnlnQ8K298 1121 aaKnown RBP19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Fam184bQ0KK56 942 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Erlin2Q8BFZ9 340 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Kiaa0753Q6A000 959 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Ccp110Q7TSH4 1004 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Sycp2Q9CUU3 1500 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Tubb6Q922F4 447 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Fan1Q69ZT1 1020 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 1700010I14RikQ7TPG0 532 aa19.91■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Prm3Q62100 101 aa19.9■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Def6Q8C2K1 630 aa19.9■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 CftrP26361 1476 aa19.89■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 CrcpO35427 148 aa19.89■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Ints3Q7TPD0 1041 aaKnown RBP19.89■□□□□ 0.78
Ccdc88a-201ENSMUST00000040182 Gnai1B2RSH2 354 aa19.89■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Gnai3Q9DC51 354 aa19.89■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Nsd2Q8BVE8 1365 aa19.89■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Pak3Q61036 559 aa19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Gnl3lQ6PGG6 577 aaKnown RBP19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Utp14aQ640M1 767 aaKnown RBP19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Nop14Q8R3N1 860 aaKnown RBP19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 TxlnbQ8VBT1 685 aa19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 FanciQ8K368 1330 aa19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Cabp4Q8VHC5 271 aa19.88■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Phldb2Q8K1N2 1249 aa19.87■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Eif2s2Q99L45 331 aaKnown RBP19.87■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Nolc1E9Q5C9 702 aaKnown RBP19.87■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Vps8Q0P5W1 1427 aa19.86■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Phactr2B1AVP0 632 aa19.85■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Nap1l1P28656 391 aaKnown RBP19.85■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Dhx16G3X8X0 1044 aaKnown RBP19.85■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Sycp1Q62209 993 aa19.85■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 ErbinQ80TH2 1402 aa19.84■□□□□ 0.77
Ccdc88a-201ENSMUST00000040182 Phf14Q9D4H9 881 aa19.83■□□□□ 0.76
Ccdc88a-201ENSMUST00000040182 SkilQ60665 675 aa19.82■□□□□ 0.76
Ccdc88a-201ENSMUST00000040182 PnisrA2AJT4 805 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms