RNA–Protein interactions for RNA: ENSMUST00000025649.8

Ddb1-201, Transcript of DNA damage-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddb1, Length 4,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1-201ENSMUST00000025649 Eif4g2Q62448 906 aaKnown RBP9.73□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Ankrd36D3Z4K0 1415 aa9.72□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Mast1Q9R1L5 1570 aa9.72□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Rtf1A2AQ19 715 aaKnown RBP9.72□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Pdcd11Q6NS46 1862 aaKnown RBP9.72□□□□□ -0.85
Ddb1-201ENSMUST00000025649 ErbinQ80TH2 1402 aa9.72□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Wwc2Q6NXJ0 1187 aa9.71□□□□□ -0.85
Ddb1-201ENSMUST00000025649 Ylpm1Q9R0I7 1386 aaKnown RBP9.71□□□□□ -0.86
Ddb1-201ENSMUST00000025649 AlkP97793 1621 aa9.71□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Map7O88735 730 aa9.71□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Kdm5cP41230 1554 aa9.7□□□□□ -0.86
Ddb1-201ENSMUST00000025649 RereQ80TZ9 1558 aa9.7□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Usp54Q8BL06 1588 aaKnown RBP9.7□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Tmf1B9EKI3 1091 aa9.7□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Neurl4Q5NCX5 1563 aa9.7□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Srcin1Q9QWI6 1250 aa9.69□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Vsig10D3YX43 558 aa9.68□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Rwdd1Q9CQK7 243 aa9.68□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Stard8Q8K031 1019 aa9.68□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Pes1Q9EQ61 584 aaKnown RBP9.68□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Camsap2Q8C1B1 1461 aa9.68□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Cyb5rlB1AS42 316 aa9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 HnrnpuQ8VEK3 800 aaKnown RBP9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Naip5Q9R016 1403 aa9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Atp7aQ64430 1491 aa9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Plch2A2AP18 1501 aa9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Ythdc1E9Q5K9 736 aaKnown RBP9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Zscan21Q07231 555 aa9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 U2af1Q9D883 239 aaKnown RBP9.67□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Mbd3Q9Z2D8 285 aaKnown RBP9.66□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Birc3O08863 600 aa9.66□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Ppm1gQ61074 542 aa9.66□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Sall3Q62255 1320 aa9.66□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Kif1bQ60575 1816 aaKnown RBP9.66□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Cdc42bpgQ80UW5 1551 aa9.65□□□□□ -0.86
Ddb1-201ENSMUST00000025649 PtprgQ05909 1442 aa9.65□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Htatsf1Q8BGC0 757 aa9.65□□□□□ -0.86
Ddb1-201ENSMUST00000025649 Dcaf11Q91VU6 549 aa9.65□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Hsp90b1P08113 802 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Speer4f1Q9D5Q6 258 aa9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Sart3Q9JLI8 962 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Utp14aQ640M1 767 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 U2surpQ6NV83 1029 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Fhod3Q76LL6 1578 aa9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 GphnQ8BUV3 769 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Ccdc9Q8VC31 543 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 KnstrnQ9D9Z1 312 aaKnown RBP9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Trim44Q9QXA7 346 aa9.64□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Sox12Q04890 314 aa9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Pde3bQ61409 1100 aa9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Plin1Q8CGN5 517 aa9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Hfm1D3Z4R1 1434 aa9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 PnnO35691 725 aaKnown RBP9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Q3TQI7 289 aaKnown RBP9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Kif14L0N7N1 1674 aaKnown RBP9.63□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Fan1Q69ZT1 1020 aa9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Talpid3E9PV87 1520 aa9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Sin3aQ60520 1274 aaKnown RBP9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Shq1Q7TMX5 569 aa9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Pip4k2bQ80XI4 416 aa9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Mak16Q8BGS0 296 aaKnown RBP9.62□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Znf316Q6PGE4 1016 aa9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Rock2P70336 1388 aa9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Kiaa0556Q8C753 1610 aa9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Xrn1P97789 1719 aaKnown RBP9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 CatipB9EKE5 520 aa9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Golga2Q921M4 999 aa9.61□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Plcb2A3KGF7 1181 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Ap3b2Q9JME5 1082 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Trpm2Q91YD4 1506 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Nol10Q5RJG1 687 aaKnown RBP9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Washc2Q6PGL7 1334 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Tmco5bQ80X59 307 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Exoc6Q8R313 802 aa9.6□□□□□ -0.87
Ddb1-201ENSMUST00000025649 MccE9PWI3 1003 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Dbr1Q923B1 550 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Armcx1Q9CX83 456 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 CenpjQ569L8 1344 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Qser1A2BIE1 1698 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 Q9D9H8 365 aa9.59□□□□□ -0.87
Ddb1-201ENSMUST00000025649 PtmaP26350 111 aa9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Rprd2Q6NXI6 1469 aaKnown RBP9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Zmym4A2A791 1549 aaKnown RBP9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Pik3c2gO70167 1506 aa9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 ShprhQ7TPQ3 1674 aa9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Uggt2E9Q4X2 1504 aa9.58□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Chmp5Q9D7S9 219 aa9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Sh3bp5Q9Z131 463 aa9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Slc4a1apE9PX68 744 aa9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Clstn1Q9EPL2 979 aa9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Abca6Q8K441 1624 aa9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Supt6hQ62383 1726 aaKnown RBP9.57□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Q8BT18 775 aa9.56□□□□□ -0.88
Ddb1-201ENSMUST00000025649 DroshaQ5HZJ0 1373 aaKnown RBP9.56□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Casc1Q6TDU8 730 aa9.56□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Topbp1Q6ZQF0 1515 aa9.56□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Edc4Q3UJB9 1406 aaKnown RBP9.56□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Rock1P70335 1354 aa9.55□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Asxl1P59598 1514 aa9.55□□□□□ -0.88
Ddb1-201ENSMUST00000025649 Abca17E9PX95 1733 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms