RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPL39P04650 51 aa7.02□□□□□ -1.29
SRP54YPR088C SEC22P22214 214 aa7.02□□□□□ -1.29
SRP54YPR088C TAD2P47058 250 aa7.02□□□□□ -1.29
SRP54YPR088C YJR111CP47148 283 aaKnown RBP7.02□□□□□ -1.29
SRP54YPR088C HSK3P69852 69 aa7.02□□□□□ -1.29
SRP54YPR088C CAC2Q04199 468 aa7.02□□□□□ -1.29
SRP54YPR088C GMC1Q04399 608 aa7.02□□□□□ -1.29
SRP54YPR088C RIM9Q04734 239 aa7.02□□□□□ -1.29
SRP54YPR088C ASM4Q05166 528 aa7.02□□□□□ -1.29
SRP54YPR088C ANT1Q06497 328 aa7.02□□□□□ -1.29
SRP54YPR088C YOL029CQ08187 201 aa7.02□□□□□ -1.29
SRP54YPR088C YOR292CQ08743 309 aa7.02□□□□□ -1.29
SRP54YPR088C DGK1Q12382 290 aa7.02□□□□□ -1.29
SRP54YPR088C YJR112W-AQ3E743 109 aa7.02□□□□□ -1.29
SRP54YPR088C HUG1Q6Q5K6 68 aa7.02□□□□□ -1.29
SRP54YPR088C ERG2P32352 222 aa7.01□□□□□ -1.29
SRP54YPR088C PDC2P32896 925 aa7.01□□□□□ -1.29
SRP54YPR088C SPC29P33419 253 aa7.01□□□□□ -1.29
SRP54YPR088C SIT1P39980 628 aa7.01□□□□□ -1.29
SRP54YPR088C SLM1P40485 686 aa7.01□□□□□ -1.29
SRP54YPR088C QRI1P43123 477 aaKnown RBP7.01□□□□□ -1.29
SRP54YPR088C XPT1P47165 209 aa7.01□□□□□ -1.29
SRP54YPR088C ACT1P60010 375 aaKnown RBP7.01□□□□□ -1.29
SRP54YPR088C VPS28Q02767 242 aa7.01□□□□□ -1.29
SRP54YPR088C PML1Q07930 204 aaPredicted RBP7.01□□□□□ -1.29
SRP54YPR088C FMP16Q12497 93 aa7.01□□□□□ -1.29
SRP54YPR088C RPL43AP0CX25 92 aaKnown RBP7.01□□□□□ -1.29
SRP54YPR088C RPL43BP0CX26 92 aa7.01□□□□□ -1.29
SRP54YPR088C YKL187CP34231 750 aa7.01□□□□□ -1.29
SRP54YPR088C ERV15P38312 142 aa7.01□□□□□ -1.29
SRP54YPR088C VMA7P39111 118 aa7.01□□□□□ -1.29
SRP54YPR088C YER121WP40076 114 aa7.01□□□□□ -1.29
SRP54YPR088C BNA2P47125 453 aa7.01□□□□□ -1.29
SRP54YPR088C PNC1P53184 216 aaKnown RBP7.01□□□□□ -1.29
SRP54YPR088C ORM2Q06144 216 aa7.01□□□□□ -1.29
SRP54YPR088C PRP11Q07350 266 aaPredicted RBP7.01□□□□□ -1.29
SRP54YPR088C RRT7Q07829 113 aa7.01□□□□□ -1.29
SRP54YPR088C ALG6Q12001 544 aaKnown RBP7.01□□□□□ -1.29
SRP54YPR088C SWT1Q12104 458 aa7.01□□□□□ -1.29
SRP54YPR088C RFM1Q12192 310 aa7.01□□□□□ -1.29
SRP54YPR088C CPR5P35176 225 aa7□□□□□ -1.29
SRP54YPR088C GLR1P41921 483 aaKnown RBP7□□□□□ -1.29
SRP54YPR088C TEX1P53851 422 aaKnown RBP7□□□□□ -1.29
SRP54YPR088C GPI15P53961 229 aa7□□□□□ -1.29
SRP54YPR088C ECM18Q04623 453 aa7□□□□□ -1.29
SRP54YPR088C AEP3Q12089 606 aa7□□□□□ -1.29
SRP54YPR088C WSC3Q12215 556 aa7□□□□□ -1.29
SRP54YPR088C ATG31Q12421 196 aa7□□□□□ -1.29
SRP54YPR088C YLR146W-AQ2V2P1 62 aa7□□□□□ -1.29
SRP54YPR088C COQ2P32378 372 aa6.99□□□□□ -1.29
SRP54YPR088C SGN1P40561 250 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
SRP54YPR088C YHC3P47040 408 aa6.99□□□□□ -1.29
SRP54YPR088C PEF1P53238 335 aa6.99□□□□□ -1.29
SRP54YPR088C DID2P69771 204 aa6.99□□□□□ -1.29
SRP54YPR088C ISC10P32645 267 aa6.98□□□□□ -1.29
SRP54YPR088C PCL7P40186 285 aa6.98□□□□□ -1.29
SRP54YPR088C GAT2P40209 560 aa6.98□□□□□ -1.29
SRP54YPR088C YJR012CP47087 207 aa6.98□□□□□ -1.29
SRP54YPR088C GEP7P53171 287 aa6.98□□□□□ -1.29
SRP54YPR088C YMR105W-AQ8TGS8 64 aa6.98□□□□□ -1.29
SRP54YPR088C LSB5P25369 354 aa6.98□□□□□ -1.29
SRP54YPR088C GAR1P28007 205 aaKnown RBP6.98□□□□□ -1.29
SRP54YPR088C CTR2P38865 189 aa6.98□□□□□ -1.29
SRP54YPR088C IKI1P38874 309 aa6.98□□□□□ -1.29
SRP54YPR088C ASP1P38986 381 aaPredicted RBP6.98□□□□□ -1.29
SRP54YPR088C GCV3P39726 170 aaPredicted RBP6.98□□□□□ -1.29
SRP54YPR088C SSO2P39926 295 aa6.98□□□□□ -1.29
SRP54YPR088C PIR5P46999 287 aa6.98□□□□□ -1.29
SRP54YPR088C TTI2P47168 421 aa6.98□□□□□ -1.29
SRP54YPR088C PKP2P53170 491 aa6.98□□□□□ -1.29
SRP54YPR088C RPL21AQ02753 160 aaKnown RBP6.98□□□□□ -1.29
SRP54YPR088C ERP1Q05359 219 aaKnown RBP6.98□□□□□ -1.29
SRP54YPR088C YFH1Q07540 174 aa6.98□□□□□ -1.29
SRP54YPR088C PAM18Q07914 168 aa6.98□□□□□ -1.29
SRP54YPR088C RPL21BQ12672 160 aaKnown RBP6.98□□□□□ -1.29
SRP54YPR088C YBR085C-AO43137 85 aa6.97□□□□□ -1.29
SRP54YPR088C GDH1P07262 454 aaKnown RBP6.97□□□□□ -1.29
SRP54YPR088C DBP2P24783 546 aaKnown RBP6.97□□□□□ -1.29
SRP54YPR088C EMP24P32803 203 aaKnown RBP6.97□□□□□ -1.29
SRP54YPR088C REC104P33323 182 aa6.97□□□□□ -1.29
SRP54YPR088C YEA6P39953 335 aa6.97□□□□□ -1.29
SRP54YPR088C SRB7P47822 140 aa6.97□□□□□ -1.29
SRP54YPR088C SBH2P52871 88 aa6.97□□□□□ -1.29
SRP54YPR088C YIF1P53845 314 aaKnown RBP6.97□□□□□ -1.29
SRP54YPR088C CWC25P53854 179 aaKnown RBP6.97□□□□□ -1.29
SRP54YPR088C TIM10P87108 93 aa6.97□□□□□ -1.29
SRP54YPR088C HED1Q03937 162 aa6.97□□□□□ -1.29
SRP54YPR088C SNA4Q07549 140 aa6.97□□□□□ -1.29
SRP54YPR088C HRD1Q08109 551 aa6.97□□□□□ -1.29
SRP54YPR088C YOR029WQ12243 111 aa6.97□□□□□ -1.29
SRP54YPR088C ATP10P18496 279 aa6.96□□□□□ -1.3
SRP54YPR088C SRY1P36007 326 aa6.96□□□□□ -1.3
SRP54YPR088C LSM12P38828 187 aaKnown RBP6.96□□□□□ -1.3
SRP54YPR088C AGX1P43567 385 aa6.96□□□□□ -1.3
SRP54YPR088C UBC12P52491 188 aa6.96□□□□□ -1.3
SRP54YPR088C YGL262WP53054 175 aa6.96□□□□□ -1.3
SRP54YPR088C YGL117WP53133 265 aa6.96□□□□□ -1.3
SRP54YPR088C YDR415CQ04033 374 aaPredicted RBP6.96□□□□□ -1.3
SRP54YPR088C BER1Q06688 274 aaKnown RBP6.96□□□□□ -1.3
SRP54YPR088C APA2P22108 325 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms