RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W POL1P13382 1468 aa1.8□□□□□ -2.12
UBP16YPL072W RSA4P25382 515 aaKnown RBP1.8□□□□□ -2.12
UBP16YPL072W HMF1P40037 129 aaKnown RBP1.8□□□□□ -2.12
UBP16YPL072W AIM25P47140 327 aa1.8□□□□□ -2.12
UBP16YPL072W PRM15Q03262 622 aa1.8□□□□□ -2.12
UBP16YPL072W PEX12Q04370 399 aa1.8□□□□□ -2.12
UBP16YPL072W LPP1Q04396 274 aa1.8□□□□□ -2.12
UBP16YPL072W GIM5Q04493 163 aa1.8□□□□□ -2.12
UBP16YPL072W TDA8Q6B2U8 126 aa1.8□□□□□ -2.12
UBP16YPL072W IGO2Q9P305 131 aa1.8□□□□□ -2.12
UBP16YPL072W SSK2P53599 1579 aa1.79□□□□□ -2.12
UBP16YPL072W UFD4P33202 1483 aa1.79□□□□□ -2.12
UBP16YPL072W SIN3P22579 1536 aa1.79□□□□□ -2.12
UBP16YPL072W Q0255P03881 472 aa1.79□□□□□ -2.12
UBP16YPL072W RPL9AP05738 191 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W MAG1P22134 296 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W ECM4P36156 370 aa1.79□□□□□ -2.12
UBP16YPL072W POP4P38336 279 aa1.79□□□□□ -2.12
UBP16YPL072W TIF34P40217 347 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W PDS1P40316 373 aaPredicted RBP1.79□□□□□ -2.12
UBP16YPL072W RPA43P46669 326 aa1.79□□□□□ -2.12
UBP16YPL072W RPL9BP51401 191 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W YGL088WP53151 121 aa1.79□□□□□ -2.12
UBP16YPL072W EFM5P53200 248 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W GAS3Q03655 524 aa1.79□□□□□ -2.12
UBP16YPL072W FEX1Q08913 375 aa1.79□□□□□ -2.12
UBP16YPL072W FEX2Q08991 375 aa1.79□□□□□ -2.12
UBP16YPL072W YHR214C-EQ8TGK0 99 aa1.79□□□□□ -2.12
UBP16YPL072W THO2P53552 1597 aaKnown RBP1.79□□□□□ -2.12
UBP16YPL072W YPK9Q12697 1472 aa1.79□□□□□ -2.12
UBP16YPL072W SEC4P07560 215 aaKnown RBP1.78□□□□□ -2.12
UBP16YPL072W PUT1P09368 476 aa1.78□□□□□ -2.12
UBP16YPL072W YHR032W-AP0C5N6 59 aa1.78□□□□□ -2.12
UBP16YPL072W TRX3P25372 127 aa1.78□□□□□ -2.12
UBP16YPL072W TRR1P29509 319 aaKnown RBP1.78□□□□□ -2.12
UBP16YPL072W IRC22P40006 225 aa1.78□□□□□ -2.12
UBP16YPL072W POG1P40473 351 aa1.78□□□□□ -2.12
UBP16YPL072W RSM10Q03201 203 aa1.78□□□□□ -2.12
UBP16YPL072W FUS2Q05670 677 aa1.78□□□□□ -2.12
UBP16YPL072W NOC4Q06512 552 aaPredicted RBP1.78□□□□□ -2.12
UBP16YPL072W YOR268CQ08734 132 aa1.78□□□□□ -2.12
UBP16YPL072W TOP2P06786 1428 aaKnown RBP1.78□□□□□ -2.12
UBP16YPL072W BPT1P14772 1559 aa1.77□□□□□ -2.13
UBP16YPL072W MYO2P19524 1574 aaKnown RBP1.77□□□□□ -2.13
UBP16YPL072W TRM732Q03496 1420 aa1.77□□□□□ -2.13
UBP16YPL072W YHR139C-AO13536 103 aa1.77□□□□□ -2.13
UBP16YPL072W CDC7P06243 507 aa1.77□□□□□ -2.13
UBP16YPL072W SIR2P06700 562 aa1.77□□□□□ -2.13
UBP16YPL072W MRS1P07266 363 aa1.77□□□□□ -2.13
UBP16YPL072W KRE1P17260 313 aa1.77□□□□□ -2.13
UBP16YPL072W CCA1P21269 546 aa1.77□□□□□ -2.13
UBP16YPL072W TCA17P32613 152 aa1.77□□□□□ -2.13
UBP16YPL072W YHL026CP38740 315 aa1.77□□□□□ -2.13
UBP16YPL072W SRP14P38985 146 aa1.77□□□□□ -2.13
UBP16YPL072W COG3P40094 801 aa1.77□□□□□ -2.13
UBP16YPL072W PIR5P46999 287 aa1.77□□□□□ -2.13
UBP16YPL072W YNL247WP53852 767 aaKnown RBP1.77□□□□□ -2.13
UBP16YPL072W YNL010WP53981 241 aaKnown RBP1.77□□□□□ -2.13
UBP16YPL072W YOL024WQ08172 172 aa1.77□□□□□ -2.13
UBP16YPL072W YOL160WQ08321 113 aa1.77□□□□□ -2.13
UBP16YPL072W AKR2Q12013 749 aa1.77□□□□□ -2.13
UBP16YPL072W MHT1Q12525 324 aa1.77□□□□□ -2.13
UBP16YPL072W YDL085C-AQ3E7B7 68 aaKnown RBP1.77□□□□□ -2.13
UBP16YPL072W ESP1Q03018 1630 aa1.77□□□□□ -2.13
UBP16YPL072W RPO31P04051 1460 aa1.77□□□□□ -2.13
UBP16YPL072W SCC2Q04002 1493 aa1.77□□□□□ -2.13
UBP16YPL072W SMC4Q12267 1418 aa1.77□□□□□ -2.13
UBP16YPL072W CDC8P00572 216 aa1.76□□□□□ -2.13
UBP16YPL072W MSW1P04803 379 aa1.76□□□□□ -2.13
UBP16YPL072W CKS1P20486 150 aaKnown RBP1.76□□□□□ -2.13
UBP16YPL072W BET1P22804 142 aa1.76□□□□□ -2.13
UBP16YPL072W TAH1P25638 111 aaPredicted RBP1.76□□□□□ -2.13
UBP16YPL072W MIG1P27705 504 aa1.76□□□□□ -2.13
UBP16YPL072W UTR5P32630 166 aa1.76□□□□□ -2.13
UBP16YPL072W SDH4P37298 181 aa1.76□□□□□ -2.13
UBP16YPL072W GLE2P40066 365 aa1.76□□□□□ -2.13
UBP16YPL072W DSK2P48510 373 aa1.76□□□□□ -2.13
UBP16YPL072W YGR050CP53231 118 aa1.76□□□□□ -2.13
UBP16YPL072W SSU72P53538 206 aaPredicted RBP1.76□□□□□ -2.13
UBP16YPL072W NRK1P53915 240 aa1.76□□□□□ -2.13
UBP16YPL072W SNO1Q03144 224 aa1.76□□□□□ -2.13
UBP16YPL072W YPL162CQ12042 273 aa1.76□□□□□ -2.13
UBP16YPL072W YOR1P53049 1477 aa1.76□□□□□ -2.13
UBP16YPL072W MDS3P53094 1487 aa1.76□□□□□ -2.13
UBP16YPL072W YLR156WP0CE96 114 aa1.76□□□□□ -2.13
UBP16YPL072W YLR159WP0CE97 114 aa1.76□□□□□ -2.13
UBP16YPL072W YLR161WP0CE98 114 aa1.76□□□□□ -2.13
UBP16YPL072W SNF4P12904 322 aa1.76□□□□□ -2.13
UBP16YPL072W URA5P13298 226 aaKnown RBP1.76□□□□□ -2.13
UBP16YPL072W GCY1P14065 312 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
UBP16YPL072W ACP1P32463 125 aa1.76□□□□□ -2.13
UBP16YPL072W SCM4P32564 187 aa1.76□□□□□ -2.13
UBP16YPL072W AIM2P39721 246 aa1.76□□□□□ -2.13
UBP16YPL072W YER084WP40057 128 aa1.76□□□□□ -2.13
UBP16YPL072W ERG10P41338 398 aaKnown RBP1.76□□□□□ -2.13
UBP16YPL072W COG5P53951 403 aa1.76□□□□□ -2.13
UBP16YPL072W PET191Q02772 108 aa1.76□□□□□ -2.13
UBP16YPL072W GRX8Q05926 109 aa1.76□□□□□ -2.13
UBP16YPL072W GGA1Q06336 557 aa1.76□□□□□ -2.13
UBP16YPL072W GRE1Q08969 168 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms