RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C MGE1P38523 228 aa6.49□□□□□ -1.37
RUP1YOR138C TOK1P40310 691 aa6.49□□□□□ -1.37
RUP1YOR138C RTS2P40962 232 aa6.49□□□□□ -1.37
RUP1YOR138C MGA1P53050 456 aa6.49□□□□□ -1.37
RUP1YOR138C NSA1P53136 463 aaPredicted RBP6.49□□□□□ -1.37
RUP1YOR138C MSO1P53604 210 aaKnown RBP6.49□□□□□ -1.37
RUP1YOR138C ASM4Q05166 528 aa6.49□□□□□ -1.37
RUP1YOR138C FCY22Q12119 530 aa6.49□□□□□ -1.37
RUP1YOR138C TY1A-HP0C2I4 478 aaKnown RBP6.49□□□□□ -1.37
RUP1YOR138C MRPL28P36527 147 aa6.49□□□□□ -1.37
RUP1YOR138C SLM6P38343 150 aa6.49□□□□□ -1.37
RUP1YOR138C YPT31P38555 223 aaKnown RBP6.49□□□□□ -1.37
RUP1YOR138C FMO1P38866 432 aa6.49□□□□□ -1.37
RUP1YOR138C YGL185CP53100 379 aa6.49□□□□□ -1.37
RUP1YOR138C YNR048WP53740 393 aa6.49□□□□□ -1.37
RUP1YOR138C RSM10Q03201 203 aa6.49□□□□□ -1.37
RUP1YOR138C HOF1Q05080 669 aa6.49□□□□□ -1.37
RUP1YOR138C HNT3Q08702 217 aa6.49□□□□□ -1.37
RUP1YOR138C RIP1P08067 215 aa6.48□□□□□ -1.37
RUP1YOR138C RPL30P14120 105 aaKnown RBP6.48□□□□□ -1.37
RUP1YOR138C SNF5P18480 905 aa6.48□□□□□ -1.37
RUP1YOR138C SPO13P23624 291 aa6.48□□□□□ -1.37
RUP1YOR138C OCH1P31755 480 aa6.48□□□□□ -1.37
RUP1YOR138C PTC7P38797 343 aa6.48□□□□□ -1.37
RUP1YOR138C YHR210CP38893 341 aa6.48□□□□□ -1.37
RUP1YOR138C PAC2P39937 518 aa6.48□□□□□ -1.37
RUP1YOR138C LSM4P40070 187 aaKnown RBP6.48□□□□□ -1.37
RUP1YOR138C XBP1P40489 647 aa6.48□□□□□ -1.37
RUP1YOR138C RSM23Q01163 450 aa6.48□□□□□ -1.37
RUP1YOR138C REX3Q12090 404 aa6.48□□□□□ -1.37
RUP1YOR138C WSC3Q12215 556 aa6.48□□□□□ -1.37
RUP1YOR138C PEX7P39108 375 aa6.47□□□□□ -1.37
RUP1YOR138C CUP9P41817 306 aa6.47□□□□□ -1.37
RUP1YOR138C RPA34P47006 233 aaPredicted RBP6.47□□□□□ -1.37
RUP1YOR138C GWT1P47026 490 aa6.47□□□□□ -1.37
RUP1YOR138C LCL3P53153 274 aa6.47□□□□□ -1.37
RUP1YOR138C SMM1P53720 384 aaKnown RBP6.47□□□□□ -1.37
RUP1YOR138C ACS1Q01574 713 aa6.47□□□□□ -1.37
RUP1YOR138C GIS1Q03833 894 aa6.47□□□□□ -1.37
RUP1YOR138C NIP7Q08962 181 aaKnown RBP6.47□□□□□ -1.37
RUP1YOR138C BRR2P32639 2163 aaKnown RBP6.47□□□□□ -1.37
RUP1YOR138C YMR084WA2P2R3 262 aa6.47□□□□□ -1.37
RUP1YOR138C CDC28P00546 298 aaKnown RBP6.47□□□□□ -1.37
RUP1YOR138C ALK2P32789 676 aaPredicted RBP6.47□□□□□ -1.37
RUP1YOR138C UPS2P35200 230 aa6.47□□□□□ -1.37
RUP1YOR138C MRPS9P38120 278 aa6.47□□□□□ -1.37
RUP1YOR138C AVT5P38176 459 aa6.47□□□□□ -1.37
RUP1YOR138C REE1P40893 198 aa6.47□□□□□ -1.37
RUP1YOR138C YPL039WQ03080 316 aa6.47□□□□□ -1.37
RUP1YOR138C YOR186WQ08560 144 aa6.47□□□□□ -1.37
RUP1YOR138C TGS1Q12052 315 aa6.47□□□□□ -1.37
RUP1YOR138C IZH2Q12442 317 aa6.47□□□□□ -1.37
RUP1YOR138C YLR365WQ7LIF2 110 aa6.47□□□□□ -1.37
RUP1YOR138C TRS20P38334 175 aa6.46□□□□□ -1.38
RUP1YOR138C RTC3P38804 111 aaPredicted RBP6.46□□□□□ -1.38
RUP1YOR138C PAU4P53427 120 aa6.46□□□□□ -1.38
RUP1YOR138C AVO2Q04749 426 aa6.46□□□□□ -1.38
RUP1YOR138C CTR3Q06686 241 aa6.46□□□□□ -1.38
RUP1YOR138C DCN1Q12395 269 aa6.46□□□□□ -1.38
RUP1YOR138C HUG1Q6Q5K6 68 aa6.46□□□□□ -1.38
RUP1YOR138C VMA3P25515 160 aa6.45□□□□□ -1.38
RUP1YOR138C CDC50P25656 391 aa6.45□□□□□ -1.38
RUP1YOR138C POP2P39008 433 aa6.45□□□□□ -1.38
RUP1YOR138C PHS1P40857 217 aa6.45□□□□□ -1.38
RUP1YOR138C ERG25P53045 309 aa6.45□□□□□ -1.38
RUP1YOR138C ERV14P53173 138 aa6.45□□□□□ -1.38
RUP1YOR138C MRP51Q02950 344 aa6.45□□□□□ -1.38
RUP1YOR138C YDR286CQ05530 114 aa6.45□□□□□ -1.38
RUP1YOR138C MED7Q08278 222 aa6.45□□□□□ -1.38
RUP1YOR138C PRR2Q12310 699 aa6.45□□□□□ -1.38
RUP1YOR138C YLR118CQ12354 227 aa6.45□□□□□ -1.38
RUP1YOR138C PAR32Q12515 295 aaKnown RBP6.45□□□□□ -1.38
RUP1YOR138C FAS1P07149 2051 aaKnown RBP6.45□□□□□ -1.38
RUP1YOR138C BLM10P43583 2143 aa6.45□□□□□ -1.38
RUP1YOR138C RPL25P04456 142 aaKnown RBP6.45□□□□□ -1.38
RUP1YOR138C SPS4P09937 338 aa6.45□□□□□ -1.38
RUP1YOR138C YCR025CP25352 136 aa6.45□□□□□ -1.38
RUP1YOR138C SCM4P32564 187 aa6.45□□□□□ -1.38
RUP1YOR138C RPB7P34087 171 aa6.45□□□□□ -1.38
RUP1YOR138C WSS1P38838 269 aa6.45□□□□□ -1.38
RUP1YOR138C CBP6P07253 162 aaPredicted RBP6.44□□□□□ -1.38
RUP1YOR138C PAU1P0CE88 120 aa6.44□□□□□ -1.38
RUP1YOR138C PAU14P0CE89 120 aa6.44□□□□□ -1.38
RUP1YOR138C PAU6P0CE90 120 aa6.44□□□□□ -1.38
RUP1YOR138C PAU18P0CE91 120 aa6.44□□□□□ -1.38
RUP1YOR138C PAU8P0CE92 120 aa6.44□□□□□ -1.38
RUP1YOR138C PAU11P0CE93 120 aa6.44□□□□□ -1.38
RUP1YOR138C YHR214C-DP0CX93 97 aa6.44□□□□□ -1.38
RUP1YOR138C LSB5P25369 354 aa6.44□□□□□ -1.38
RUP1YOR138C SOF1P33750 489 aaKnown RBP6.44□□□□□ -1.38
RUP1YOR138C YKR073CP36153 106 aa6.44□□□□□ -1.38
RUP1YOR138C YBR096WP38256 230 aa6.44□□□□□ -1.38
RUP1YOR138C PAU13P38725 120 aa6.44□□□□□ -1.38
RUP1YOR138C SMD3P43321 101 aaKnown RBP6.44□□□□□ -1.38
RUP1YOR138C MSY1P48527 492 aa6.44□□□□□ -1.38
RUP1YOR138C OCA2P53949 197 aa6.44□□□□□ -1.38
RUP1YOR138C PAU10Q03050 120 aa6.44□□□□□ -1.38
RUP1YOR138C MIX14Q04341 121 aa6.44□□□□□ -1.38
RUP1YOR138C PAU20Q08322 120 aa6.44□□□□□ -1.38
RUP1YOR138C ATG5Q12380 294 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 91 ms