RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C YMR279CQ03263 540 aa5.32□□□□□ -1.56
TSR3YOR006C GMC1Q04399 608 aa5.32□□□□□ -1.56
TSR3YOR006C NEJ1Q06148 342 aa5.32□□□□□ -1.56
TSR3YOR006C FRE3Q08905 711 aa5.32□□□□□ -1.56
TSR3YOR006C VAM3Q12241 283 aa5.32□□□□□ -1.56
TSR3YOR006C SNU23Q12368 194 aaPredicted RBP5.32□□□□□ -1.56
TSR3YOR006C RPL25P04456 142 aaKnown RBP5.31□□□□□ -1.56
TSR3YOR006C YOX1P34161 385 aa5.31□□□□□ -1.56
TSR3YOR006C PAU24P38155 120 aa5.31□□□□□ -1.56
TSR3YOR006C AME1P38313 324 aa5.31□□□□□ -1.56
TSR3YOR006C NVJ1P38881 321 aa5.31□□□□□ -1.56
TSR3YOR006C TIM21P53220 239 aa5.31□□□□□ -1.56
TSR3YOR006C YNL046WP53956 172 aa5.31□□□□□ -1.56
TSR3YOR006C YDC1Q02896 317 aa5.31□□□□□ -1.56
TSR3YOR006C GAT3Q07928 141 aa5.31□□□□□ -1.56
TSR3YOR006C MRP1P10662 321 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C MSI1P13712 422 aa5.3□□□□□ -1.56
TSR3YOR006C RPL30P14120 105 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C AHC2P25649 128 aa5.3□□□□□ -1.56
TSR3YOR006C DEG1P31115 442 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C AIM29P36154 155 aa5.3□□□□□ -1.56
TSR3YOR006C ARC40P38328 384 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C GOS1P38736 223 aa5.3□□□□□ -1.56
TSR3YOR006C AVT6P40074 448 aa5.3□□□□□ -1.56
TSR3YOR006C OST1P41543 476 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C RBL2P48606 106 aaKnown RBP5.3□□□□□ -1.56
TSR3YOR006C YGL159WP53110 370 aa5.3□□□□□ -1.56
TSR3YOR006C TMA20P89886 181 aaPredicted RBP5.3□□□□□ -1.56
TSR3YOR006C MSS11Q03825 758 aa5.3□□□□□ -1.56
TSR3YOR006C YPR098CQ06089 161 aa5.3□□□□□ -1.56
TSR3YOR006C CSM4Q08955 156 aa5.3□□□□□ -1.56
TSR3YOR006C TFB5Q3E7C1 72 aaPredicted RBP5.3□□□□□ -1.56
TSR3YOR006C COX9P07255 59 aa5.29□□□□□ -1.56
TSR3YOR006C NHP6BP11633 99 aaKnown RBP5.29□□□□□ -1.56
TSR3YOR006C APA2P22108 325 aa5.29□□□□□ -1.56
TSR3YOR006C AFG1P32317 509 aa5.29□□□□□ -1.56
TSR3YOR006C YKL070WP36087 169 aa5.29□□□□□ -1.56
TSR3YOR006C DDI1P40087 428 aa5.29□□□□□ -1.56
TSR3YOR006C ERJ5P43613 295 aaPredicted RBP5.29□□□□□ -1.56
TSR3YOR006C HHT1P61830 136 aa5.29□□□□□ -1.56
TSR3YOR006C YKR005CQ02203 525 aa5.29□□□□□ -1.56
TSR3YOR006C MAK3Q03503 176 aa5.29□□□□□ -1.56
TSR3YOR006C RUB1Q03919 77 aa5.29□□□□□ -1.56
TSR3YOR006C YLR283WQ05867 314 aa5.29□□□□□ -1.56
TSR3YOR006C PEX30Q06169 523 aa5.29□□□□□ -1.56
TSR3YOR006C RFU1Q08003 200 aa5.29□□□□□ -1.56
TSR3YOR006C GEP3Q08622 556 aa5.29□□□□□ -1.56
TSR3YOR006C PRE7P23724 241 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C RCN1P36054 211 aa5.28□□□□□ -1.56
TSR3YOR006C TCM62P38228 572 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C SDS24P38314 527 aa5.28□□□□□ -1.56
TSR3YOR006C YIR020CP40575 100 aa5.28□□□□□ -1.56
TSR3YOR006C GLR1P41921 483 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C CIN2P46670 268 aa5.28□□□□□ -1.56
TSR3YOR006C NCA3P46955 337 aa5.28□□□□□ -1.56
TSR3YOR006C LSM8P47093 109 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C EFM3P47163 339 aa5.28□□□□□ -1.56
TSR3YOR006C AVT4P50944 713 aa5.28□□□□□ -1.56
TSR3YOR006C DUO1P53168 247 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C SCW4P53334 386 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C YMR252CQ04814 134 aa5.28□□□□□ -1.56
TSR3YOR006C BBP1Q12365 385 aa5.28□□□□□ -1.56
TSR3YOR006C UTP20P35194 2493 aaKnown RBP5.28□□□□□ -1.56
TSR3YOR006C SGA1P08019 549 aa5.27□□□□□ -1.57
TSR3YOR006C SPS4P09937 338 aa5.27□□□□□ -1.57
TSR3YOR006C YER190C-BP0CX94 160 aa5.27□□□□□ -1.57
TSR3YOR006C YEL077W-AP0CX95 160 aa5.27□□□□□ -1.57
TSR3YOR006C YGR296C-BP0CX96 160 aa5.27□□□□□ -1.57
TSR3YOR006C YPL283W-BP0CX97 160 aa5.27□□□□□ -1.57
TSR3YOR006C YPR204C-AP0CX98 160 aa5.27□□□□□ -1.57
TSR3YOR006C MRP2P10663 115 aaPredicted RBP5.27□□□□□ -1.57
TSR3YOR006C RPS5P26783 225 aaKnown RBP5.27□□□□□ -1.57
TSR3YOR006C REC114P32841 428 aa5.27□□□□□ -1.57
TSR3YOR006C ICS2P38284 255 aa5.27□□□□□ -1.57
TSR3YOR006C FLO5P38894 1075 aa5.27□□□□□ -1.57
TSR3YOR006C AIM24P47127 394 aa5.27□□□□□ -1.57
TSR3YOR006C PMT5P52867 743 aa5.27□□□□□ -1.57
TSR3YOR006C PKP2P53170 491 aa5.27□□□□□ -1.57
TSR3YOR006C POP6P53218 158 aa5.27□□□□□ -1.57
TSR3YOR006C YDR248CQ03786 193 aa5.27□□□□□ -1.57
TSR3YOR006C YLR108CQ12259 485 aa5.27□□□□□ -1.57
TSR3YOR006C AGC1Q12482 902 aa5.27□□□□□ -1.57
TSR3YOR006C WIP1Q2V2P8 89 aa5.27□□□□□ -1.57
TSR3YOR006C YLR099W-AQ3E798 87 aa5.27□□□□□ -1.57
TSR3YOR006C YEL009C-AA0A023PZF2 135 aa5.26□□□□□ -1.57
TSR3YOR006C TDH2P00358 332 aaKnown RBP5.26□□□□□ -1.57
TSR3YOR006C RPL39P04650 51 aa5.26□□□□□ -1.57
TSR3YOR006C ADK1P07170 222 aaKnown RBP5.26□□□□□ -1.57
TSR3YOR006C MATALPHA1P0CY06 175 aa5.26□□□□□ -1.57
TSR3YOR006C HMLALPHA1P0CY07 175 aa5.26□□□□□ -1.57
TSR3YOR006C ZRC1P20107 442 aa5.26□□□□□ -1.57
TSR3YOR006C SAG1P20840 650 aa5.26□□□□□ -1.57
TSR3YOR006C PAU2P32612 120 aa5.26□□□□□ -1.57
TSR3YOR006C SNC2P33328 115 aa5.26□□□□□ -1.57
TSR3YOR006C SFK1P35735 353 aa5.26□□□□□ -1.57
TSR3YOR006C SHE2P36068 246 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
TSR3YOR006C NAT2P37293 288 aa5.26□□□□□ -1.57
TSR3YOR006C SGN1P40561 250 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
TSR3YOR006C PAM16P42949 149 aa5.26□□□□□ -1.57
TSR3YOR006C YHC3P47040 408 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms