RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W MDM34P53083 459 aa3.91□□□□□ -1.78
ROT1YMR200W FMP48P53233 369 aa3.91□□□□□ -1.78
ROT1YMR200W VHS1Q03785 461 aa3.91□□□□□ -1.78
ROT1YMR200W YLR179CQ06252 201 aaKnown RBP3.91□□□□□ -1.78
ROT1YMR200W YPR011CQ12251 326 aa3.91□□□□□ -1.78
ROT1YMR200W RPL21BQ12672 160 aaKnown RBP3.91□□□□□ -1.78
ROT1YMR200W BUD4P47136 1447 aa3.9□□□□□ -1.78
ROT1YMR200W CDC7P06243 507 aa3.9□□□□□ -1.79
ROT1YMR200W ERG2P32352 222 aa3.9□□□□□ -1.79
ROT1YMR200W CSE2P33308 149 aa3.9□□□□□ -1.79
ROT1YMR200W RPS1AP33442 255 aaKnown RBP3.9□□□□□ -1.79
ROT1YMR200W YGL101WP53144 215 aa3.9□□□□□ -1.79
ROT1YMR200W YGR050CP53231 118 aa3.9□□□□□ -1.79
ROT1YMR200W RNH201P53942 307 aa3.9□□□□□ -1.79
ROT1YMR200W PAL1Q05518 499 aaKnown RBP3.9□□□□□ -1.79
ROT1YMR200W YDR278CQ05612 105 aa3.9□□□□□ -1.79
ROT1YMR200W FRQ1Q06389 190 aa3.9□□□□□ -1.79
ROT1YMR200W YOR376WQ08900 122 aa3.9□□□□□ -1.79
ROT1YMR200W SLO1Q3E784 85 aa3.9□□□□□ -1.79
ROT1YMR200W YAL063C-AQ3E791 96 aa3.9□□□□□ -1.79
ROT1YMR200W YMR230W-AQ3E7B5 62 aa3.9□□□□□ -1.79
ROT1YMR200W SSN2P38931 1420 aa3.89□□□□□ -1.79
ROT1YMR200W UBI4P0CG63 381 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W RPS8AP0CX39 200 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W RPS8BP0CX40 200 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W MAG1P22134 296 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W UTP11P34247 250 aaPredicted RBP3.89□□□□□ -1.79
ROT1YMR200W FMP46P36141 133 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W YER186CP40101 306 aa3.89□□□□□ -1.79
ROT1YMR200W MNN5P46982 586 aa3.89□□□□□ -1.79
ROT1YMR200W ARO8P53090 500 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W HHT1P61830 136 aa3.89□□□□□ -1.79
ROT1YMR200W YMD8Q03697 442 aa3.89□□□□□ -1.79
ROT1YMR200W IES4Q08561 116 aa3.89□□□□□ -1.79
ROT1YMR200W JID1Q12350 301 aa3.89□□□□□ -1.79
ROT1YMR200W XRN1P22147 1528 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W THO2P53552 1597 aaKnown RBP3.89□□□□□ -1.79
ROT1YMR200W CNB1P25296 175 aa3.88□□□□□ -1.79
ROT1YMR200W YHI9P38765 294 aa3.88□□□□□ -1.79
ROT1YMR200W AST2P39945 430 aaKnown RBP3.88□□□□□ -1.79
ROT1YMR200W YEA4P40004 342 aa3.88□□□□□ -1.79
ROT1YMR200W ALB1P47019 175 aaPredicted RBP3.88□□□□□ -1.79
ROT1YMR200W YGL262WP53054 175 aa3.88□□□□□ -1.79
ROT1YMR200W SDT1P53078 280 aa3.88□□□□□ -1.79
ROT1YMR200W YNL010WP53981 241 aaKnown RBP3.88□□□□□ -1.79
ROT1YMR200W TIM8P57744 87 aa3.88□□□□□ -1.79
ROT1YMR200W NEJ1Q06148 342 aa3.88□□□□□ -1.79
ROT1YMR200W AKR2Q12013 749 aa3.88□□□□□ -1.79
ROT1YMR200W YPS3Q12303 508 aa3.88□□□□□ -1.79
ROT1YMR200W MPD1Q12404 318 aaKnown RBP3.88□□□□□ -1.79
ROT1YMR200W IZH2Q12442 317 aa3.88□□□□□ -1.79
ROT1YMR200W YPR014CQ6B0W2 109 aa3.88□□□□□ -1.79
ROT1YMR200W TDA8Q6B2U8 126 aa3.88□□□□□ -1.79
ROT1YMR200W PDR18P53756 1333 aa3.88□□□□□ -1.79
ROT1YMR200W SNT2P53127 1403 aa3.87□□□□□ -1.79
ROT1YMR200W YGP1P38616 354 aaKnown RBP3.87□□□□□ -1.79
ROT1YMR200W AVT6P40074 448 aa3.87□□□□□ -1.79
ROT1YMR200W APQ12P40532 138 aa3.87□□□□□ -1.79
ROT1YMR200W SOL1P50278 321 aa3.87□□□□□ -1.79
ROT1YMR200W SWT21P53873 357 aaPredicted RBP3.87□□□□□ -1.79
ROT1YMR200W LSM3P57743 89 aaKnown RBP3.87□□□□□ -1.79
ROT1YMR200W RPL21AQ02753 160 aaKnown RBP3.87□□□□□ -1.79
ROT1YMR200W INP1Q03694 420 aa3.87□□□□□ -1.79
ROT1YMR200W TRM12Q04235 462 aa3.87□□□□□ -1.79
ROT1YMR200W YDR115WQ04598 105 aa3.87□□□□□ -1.79
ROT1YMR200W YMR320WQ04897 101 aa3.87□□□□□ -1.79
ROT1YMR200W YLR281CQ05863 155 aa3.87□□□□□ -1.79
ROT1YMR200W YOR289WQ12012 251 aaPredicted RBP3.87□□□□□ -1.79
ROT1YMR200W PRR2Q12310 699 aa3.87□□□□□ -1.79
ROT1YMR200W KIN28P06242 306 aa3.86□□□□□ -1.79
ROT1YMR200W SDH3P33421 198 aa3.86□□□□□ -1.79
ROT1YMR200W MED6P38782 295 aa3.86□□□□□ -1.79
ROT1YMR200W TIM17P39515 158 aa3.86□□□□□ -1.79
ROT1YMR200W YER189WP40104 122 aa3.86□□□□□ -1.79
ROT1YMR200W HPM1P40481 377 aa3.86□□□□□ -1.79
ROT1YMR200W RPE1P46969 238 aa3.86□□□□□ -1.79
ROT1YMR200W ARP3P47117 449 aaKnown RBP3.86□□□□□ -1.79
ROT1YMR200W COS10P52924 374 aa3.86□□□□□ -1.79
ROT1YMR200W PGA1P53896 198 aa3.86□□□□□ -1.79
ROT1YMR200W GAS3Q03655 524 aa3.86□□□□□ -1.79
ROT1YMR200W FMN1Q03778 218 aa3.86□□□□□ -1.79
ROT1YMR200W SDH7Q04401 133 aa3.86□□□□□ -1.79
ROT1YMR200W EMI1Q04406 187 aa3.86□□□□□ -1.79
ROT1YMR200W HRD1Q08109 551 aa3.86□□□□□ -1.79
ROT1YMR200W TSC3Q3E790 80 aa3.86□□□□□ -1.79
ROT1YMR200W HTL1Q9URQ5 78 aa3.86□□□□□ -1.79
ROT1YMR200W CKS1P20486 150 aaKnown RBP3.85□□□□□ -1.79
ROT1YMR200W SCL1P21243 252 aaKnown RBP3.85□□□□□ -1.79
ROT1YMR200W SPO13P23624 291 aa3.85□□□□□ -1.79
ROT1YMR200W GLC8P41818 229 aa3.85□□□□□ -1.79
ROT1YMR200W BUD13P46947 266 aaPredicted RBP3.85□□□□□ -1.79
ROT1YMR200W YJL028WP47062 111 aa3.85□□□□□ -1.79
ROT1YMR200W GPI14P47088 403 aaKnown RBP3.85□□□□□ -1.79
ROT1YMR200W DID2P69771 204 aa3.85□□□□□ -1.79
ROT1YMR200W ARL3Q02804 198 aa3.85□□□□□ -1.79
ROT1YMR200W YMR244WQ04018 355 aa3.85□□□□□ -1.79
ROT1YMR200W TSA2Q04120 196 aa3.85□□□□□ -1.79
ROT1YMR200W YPL162CQ12042 273 aa3.85□□□□□ -1.79
ROT1YMR200W TIM22Q12328 207 aa3.85□□□□□ -1.79
ROT1YMR200W TOP2P06786 1428 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms