RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YER137CP40083 148 aaKnown RBP8.72□□□□□ -1.01
SHM2YLR058C SMM1P53720 384 aaKnown RBP8.72□□□□□ -1.01
SHM2YLR058C YNR064CP53750 290 aa8.72□□□□□ -1.01
SHM2YLR058C MEH1Q02205 184 aa8.72□□□□□ -1.01
SHM2YLR058C RPL21AQ02753 160 aaKnown RBP8.72□□□□□ -1.01
SHM2YLR058C ASM4Q05166 528 aa8.72□□□□□ -1.01
SHM2YLR058C NOC4Q06512 552 aaPredicted RBP8.72□□□□□ -1.01
SHM2YLR058C YOR292CQ08743 309 aa8.72□□□□□ -1.01
SHM2YLR058C SWT1Q12104 458 aa8.72□□□□□ -1.01
SHM2YLR058C BBP1Q12365 385 aa8.72□□□□□ -1.01
SHM2YLR058C RTR2Q12378 196 aa8.72□□□□□ -1.01
SHM2YLR058C RPL21BQ12672 160 aaKnown RBP8.72□□□□□ -1.01
SHM2YLR058C STF2P16965 84 aa8.71□□□□□ -1.01
SHM2YLR058C OLE1P21147 510 aaKnown RBP8.71□□□□□ -1.01
SHM2YLR058C CPR5P35176 225 aa8.71□□□□□ -1.01
SHM2YLR058C YPC1P38298 316 aa8.71□□□□□ -1.01
SHM2YLR058C YGL262WP53054 175 aa8.71□□□□□ -1.01
SHM2YLR058C DGK1Q12382 290 aa8.71□□□□□ -1.01
SHM2YLR058C SPO24Q3E752 67 aa8.71□□□□□ -1.01
SHM2YLR058C Q0297Q9ZZV8 51 aa8.71□□□□□ -1.01
SHM2YLR058C APA2P22108 325 aa8.71□□□□□ -1.02
SHM2YLR058C ERG2P32352 222 aa8.71□□□□□ -1.02
SHM2YLR058C YHL044WP38727 235 aa8.71□□□□□ -1.02
SHM2YLR058C SSO2P39926 295 aa8.71□□□□□ -1.02
SHM2YLR058C YIR020CP40575 100 aa8.71□□□□□ -1.02
SHM2YLR058C IRC24P40580 263 aa8.71□□□□□ -1.02
SHM2YLR058C VMA22P38784 181 aa8.7□□□□□ -1.02
SHM2YLR058C TTI2P47168 421 aa8.7□□□□□ -1.02
SHM2YLR058C MRPL50P53724 139 aa8.7□□□□□ -1.02
SHM2YLR058C CWC25P53854 179 aaKnown RBP8.7□□□□□ -1.02
SHM2YLR058C DMA2P53924 522 aa8.7□□□□□ -1.02
SHM2YLR058C ECM18Q04623 453 aa8.7□□□□□ -1.02
SHM2YLR058C YLR224WQ05947 369 aa8.7□□□□□ -1.02
SHM2YLR058C GDH1P07262 454 aaKnown RBP8.69□□□□□ -1.02
SHM2YLR058C ATP10P18496 279 aa8.69□□□□□ -1.02
SHM2YLR058C MRP20P32387 263 aa8.69□□□□□ -1.02
SHM2YLR058C ISC10P32645 267 aa8.69□□□□□ -1.02
SHM2YLR058C GLY1P37303 387 aaKnown RBP8.69□□□□□ -1.02
SHM2YLR058C PCL7P40186 285 aa8.69□□□□□ -1.02
SHM2YLR058C YIR035CP40579 254 aa8.69□□□□□ -1.02
SHM2YLR058C INN1P53901 409 aa8.69□□□□□ -1.02
SHM2YLR058C YDL009CQ12210 107 aa8.69□□□□□ -1.02
SHM2YLR058C YCT1Q12235 531 aa8.69□□□□□ -1.02
SHM2YLR058C TFC7Q12415 435 aa8.69□□□□□ -1.02
SHM2YLR058C URA2P07259 2214 aaKnown RBP8.68□□□□□ -1.02
SHM2YLR058C YCR061WP25639 631 aa8.68□□□□□ -1.02
SHM2YLR058C TIP1P27654 210 aaPredicted RBP8.68□□□□□ -1.02
SHM2YLR058C REC104P33323 182 aa8.68□□□□□ -1.02
SHM2YLR058C GPI18P38211 433 aa8.68□□□□□ -1.02
SHM2YLR058C YFL015CP43578 164 aa8.68□□□□□ -1.02
SHM2YLR058C PLP1Q04004 230 aa8.68□□□□□ -1.02
SHM2YLR058C YDR415CQ04033 374 aaPredicted RBP8.68□□□□□ -1.02
SHM2YLR058C IRC25Q07951 179 aa8.68□□□□□ -1.02
SHM2YLR058C RDL1Q12305 139 aaKnown RBP8.68□□□□□ -1.02
SHM2YLR058C GAR1P28007 205 aaKnown RBP8.67□□□□□ -1.02
SHM2YLR058C IES6P32617 166 aa8.67□□□□□ -1.02
SHM2YLR058C CUE1P38428 203 aa8.67□□□□□ -1.02
SHM2YLR058C IKI1P38874 309 aa8.67□□□□□ -1.02
SHM2YLR058C VPS28Q02767 242 aa8.67□□□□□ -1.02
SHM2YLR058C YFH1Q07540 174 aa8.67□□□□□ -1.02
SHM2YLR058C YNG1Q08465 219 aa8.67□□□□□ -1.02
SHM2YLR058C GEP5Q12393 293 aa8.67□□□□□ -1.02
SHM2YLR058C YGL194C-AQ2V2P6 80 aa8.67□□□□□ -1.02
SHM2YLR058C SOR1P35497 357 aaKnown RBP8.66□□□□□ -1.02
SHM2YLR058C GEP4P38812 185 aa8.66□□□□□ -1.02
SHM2YLR058C YHC3P47040 408 aa8.66□□□□□ -1.02
SHM2YLR058C WSC2P53832 503 aa8.66□□□□□ -1.02
SHM2YLR058C PRP11Q07350 266 aaPredicted RBP8.66□□□□□ -1.02
SHM2YLR058C SOR2Q07786 357 aa8.66□□□□□ -1.02
SHM2YLR058C YOL029CQ08187 201 aa8.66□□□□□ -1.02
SHM2YLR058C YJR112W-AQ3E743 109 aa8.66□□□□□ -1.02
SHM2YLR058C SEC22P22214 214 aa8.65□□□□□ -1.02
SHM2YLR058C LSB5P25369 354 aa8.65□□□□□ -1.02
SHM2YLR058C COQ2P32378 372 aa8.65□□□□□ -1.02
SHM2YLR058C ALG14P38242 237 aa8.65□□□□□ -1.02
SHM2YLR058C ERV15P38312 142 aa8.65□□□□□ -1.02
SHM2YLR058C ECM27P47144 725 aa8.65□□□□□ -1.02
SHM2YLR058C RRT7Q07829 113 aa8.65□□□□□ -1.02
SHM2YLR058C CSI2Q08054 341 aa8.65□□□□□ -1.02
SHM2YLR058C YJR111CP47148 283 aaKnown RBP8.64□□□□□ -1.03
SHM2YLR058C COA4Q05809 96 aa8.64□□□□□ -1.03
SHM2YLR058C BOL1Q3E793 110 aa8.64□□□□□ -1.03
SHM2YLR058C ROX3P25046 220 aa8.63□□□□□ -1.03
SHM2YLR058C YJR012CP47087 207 aa8.63□□□□□ -1.03
SHM2YLR058C SUT1P53032 299 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C MAG1P22134 296 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C MRS4P23500 304 aa8.63□□□□□ -1.03
SHM2YLR058C TCA17P32613 152 aa8.63□□□□□ -1.03
SHM2YLR058C PDC2P32896 925 aa8.63□□□□□ -1.03
SHM2YLR058C ADH5P38113 351 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C RPL13BP40212 199 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C SWM2P40342 146 aa8.63□□□□□ -1.03
SHM2YLR058C GZF3P42944 551 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C ABM1P47146 123 aa8.63□□□□□ -1.03
SHM2YLR058C YGL114WP53134 725 aa8.63□□□□□ -1.03
SHM2YLR058C ACT1P60010 375 aaKnown RBP8.63□□□□□ -1.03
SHM2YLR058C LPP1Q04396 274 aa8.63□□□□□ -1.03
SHM2YLR058C HRD1Q08109 551 aa8.63□□□□□ -1.03
SHM2YLR058C RPL13AQ12690 199 aaPredicted RBP8.63□□□□□ -1.03
SHM2YLR058C YCL042WP25572 119 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms