RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C BNR1P40450 1375 aa4.81□□□□□ -1.64
DEF1YKL054C ATG22P25568 528 aa4.81□□□□□ -1.64
DEF1YKL054C LDB16P25587 256 aa4.81□□□□□ -1.64
DEF1YKL054C SMP1P38128 452 aa4.81□□□□□ -1.64
DEF1YKL054C YBR285WP38354 144 aa4.81□□□□□ -1.64
DEF1YKL054C YHL044WP38727 235 aa4.81□□□□□ -1.64
DEF1YKL054C ARO8P53090 500 aaKnown RBP4.81□□□□□ -1.64
DEF1YKL054C MAG1P22134 296 aaKnown RBP4.8□□□□□ -1.64
DEF1YKL054C UGX2P32772 223 aa4.8□□□□□ -1.64
DEF1YKL054C CSH1P38287 376 aa4.8□□□□□ -1.64
DEF1YKL054C YEA4P40004 342 aa4.8□□□□□ -1.64
DEF1YKL054C APQ12P40532 138 aa4.8□□□□□ -1.64
DEF1YKL054C YIL012WP40551 113 aa4.8□□□□□ -1.64
DEF1YKL054C YJR015WP47090 510 aa4.8□□□□□ -1.64
DEF1YKL054C FRQ1Q06389 190 aa4.8□□□□□ -1.64
DEF1YKL054C YOR342CQ12182 319 aa4.8□□□□□ -1.64
DEF1YKL054C YER078W-AQ3E7A2 54 aa4.8□□□□□ -1.64
DEF1YKL054C PET9P18239 318 aaKnown RBP4.8□□□□□ -1.64
DEF1YKL054C SPO13P23624 291 aa4.8□□□□□ -1.64
DEF1YKL054C SDT1P53078 280 aa4.8□□□□□ -1.64
DEF1YKL054C RAV2Q03956 351 aa4.8□□□□□ -1.64
DEF1YKL054C ATG5Q12380 294 aa4.8□□□□□ -1.64
DEF1YKL054C HPM1P40481 377 aa4.79□□□□□ -1.64
DEF1YKL054C STB1P42845 420 aa4.79□□□□□ -1.64
DEF1YKL054C CCC1P47818 322 aa4.79□□□□□ -1.64
DEF1YKL054C YMR244WQ04018 355 aa4.79□□□□□ -1.64
DEF1YKL054C PEX34P25584 144 aa4.78□□□□□ -1.64
DEF1YKL054C HSP30P25619 332 aa4.78□□□□□ -1.64
DEF1YKL054C AST2P39945 430 aaKnown RBP4.78□□□□□ -1.64
DEF1YKL054C YER189WP40104 122 aa4.78□□□□□ -1.64
DEF1YKL054C ILM1P47155 203 aa4.78□□□□□ -1.64
DEF1YKL054C FMP42Q04991 504 aa4.78□□□□□ -1.64
DEF1YKL054C YPS3Q12303 508 aa4.78□□□□□ -1.64
DEF1YKL054C JID1Q12350 301 aa4.78□□□□□ -1.64
DEF1YKL054C SKI3P17883 1432 aaKnown RBP4.78□□□□□ -1.64
DEF1YKL054C ERG2P32352 222 aa4.78□□□□□ -1.64
DEF1YKL054C TRS20P38334 175 aa4.78□□□□□ -1.64
DEF1YKL054C BAT1P38891 393 aaKnown RBP4.78□□□□□ -1.64
DEF1YKL054C YPL039WQ03080 316 aa4.78□□□□□ -1.64
DEF1YKL054C IZH2Q12442 317 aa4.78□□□□□ -1.64
DEF1YKL054C PDR18P53756 1333 aa4.78□□□□□ -1.65
DEF1YKL054C OCH1P31755 480 aa4.77□□□□□ -1.65
DEF1YKL054C SEC17P32602 292 aa4.77□□□□□ -1.65
DEF1YKL054C UTP30P36144 274 aaKnown RBP4.77□□□□□ -1.65
DEF1YKL054C YHI9P38765 294 aa4.77□□□□□ -1.65
DEF1YKL054C BIR1P47134 954 aa4.77□□□□□ -1.65
DEF1YKL054C LSM3P57743 89 aaKnown RBP4.77□□□□□ -1.65
DEF1YKL054C FMN1Q03778 218 aa4.77□□□□□ -1.65
DEF1YKL054C NIP7Q08962 181 aaKnown RBP4.77□□□□□ -1.65
DEF1YKL054C YDL180WQ12301 547 aa4.77□□□□□ -1.65
DEF1YKL054C RPL21BQ12672 160 aaKnown RBP4.77□□□□□ -1.65
DEF1YKL054C YFR032C-BQ8TGU2 87 aa4.77□□□□□ -1.65
DEF1YKL054C YCL021W-AQ96VH3 125 aa4.77□□□□□ -1.65
DEF1YKL054C YFL067WP43537 175 aa4.77□□□□□ -1.65
DEF1YKL054C MNN5P46982 586 aa4.77□□□□□ -1.65
DEF1YKL054C YMD8Q03697 442 aa4.77□□□□□ -1.65
DEF1YKL054C RUB1Q03919 77 aa4.77□□□□□ -1.65
DEF1YKL054C GRH1Q04410 372 aaKnown RBP4.77□□□□□ -1.65
DEF1YKL054C TDA8Q6B2U8 126 aa4.77□□□□□ -1.65
DEF1YKL054C KIN28P06242 306 aa4.76□□□□□ -1.65
DEF1YKL054C PBI2P0CT04 75 aaKnown RBP4.76□□□□□ -1.65
DEF1YKL054C RPS1BP23248 255 aaKnown RBP4.76□□□□□ -1.65
DEF1YKL054C PHO89P38361 574 aa4.76□□□□□ -1.65
DEF1YKL054C AVT6P40074 448 aa4.76□□□□□ -1.65
DEF1YKL054C LPP1Q04396 274 aa4.76□□□□□ -1.65
DEF1YKL054C YOR304C-AO14468 76 aa4.76□□□□□ -1.65
DEF1YKL054C ADH1P00330 348 aaKnown RBP4.76□□□□□ -1.65
DEF1YKL054C RPF1P38805 295 aaKnown RBP4.76□□□□□ -1.65
DEF1YKL054C YML108WQ03759 105 aa4.76□□□□□ -1.65
DEF1YKL054C THI74Q04083 370 aa4.76□□□□□ -1.65
DEF1YKL054C YLR179CQ06252 201 aaKnown RBP4.76□□□□□ -1.65
DEF1YKL054C DAS2Q12084 232 aa4.76□□□□□ -1.65
DEF1YKL054C TKL2P33315 681 aa4.75□□□□□ -1.65
DEF1YKL054C SDH3P33421 198 aa4.75□□□□□ -1.65
DEF1YKL054C SKI6P46948 246 aaPredicted RBP4.75□□□□□ -1.65
DEF1YKL054C YJL028WP47062 111 aa4.75□□□□□ -1.65
DEF1YKL054C GPI14P47088 403 aaKnown RBP4.75□□□□□ -1.65
DEF1YKL054C INP1Q03694 420 aa4.75□□□□□ -1.65
DEF1YKL054C STP22P25604 385 aa4.74□□□□□ -1.65
DEF1YKL054C YGL262WP53054 175 aa4.74□□□□□ -1.65
DEF1YKL054C MDM34P53083 459 aa4.74□□□□□ -1.65
DEF1YKL054C YGL088WP53151 121 aa4.74□□□□□ -1.65
DEF1YKL054C ARL3Q02804 198 aa4.74□□□□□ -1.65
DEF1YKL054C ECM19Q06011 112 aa4.74□□□□□ -1.65
DEF1YKL054C CKS1P20486 150 aaKnown RBP4.74□□□□□ -1.65
DEF1YKL054C YCR043CP25361 127 aa4.74□□□□□ -1.65
DEF1YKL054C UTP11P34247 250 aaPredicted RBP4.74□□□□□ -1.65
DEF1YKL054C MSA2P36157 363 aa4.74□□□□□ -1.65
DEF1YKL054C MED6P38782 295 aa4.74□□□□□ -1.65
DEF1YKL054C TIM17P39515 158 aa4.74□□□□□ -1.65
DEF1YKL054C RFC2P40348 353 aa4.74□□□□□ -1.65
DEF1YKL054C CAB4P53332 305 aa4.74□□□□□ -1.65
DEF1YKL054C GAS3Q03655 524 aa4.74□□□□□ -1.65
DEF1YKL054C NDD1Q08887 554 aa4.74□□□□□ -1.65
DEF1YKL054C YLR462WO13556 202 aa4.73□□□□□ -1.65
DEF1YKL054C YEL075CP39972 122 aa4.73□□□□□ -1.65
DEF1YKL054C MEP2P41948 499 aa4.73□□□□□ -1.65
DEF1YKL054C SWT21P53873 357 aaPredicted RBP4.73□□□□□ -1.65
DEF1YKL054C YPL162CQ12042 273 aa4.73□□□□□ -1.65
DEF1YKL054C HTL1Q9URQ5 78 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 57.5 ms