RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W PEX3P28795 441 aa0.59□□□□□ -2.31
YCK3YER123W DOA4P32571 926 aa0.59□□□□□ -2.31
YCK3YER123W SSH1P38353 490 aaKnown RBP0.59□□□□□ -2.31
YCK3YER123W TEM1P38987 245 aa0.59□□□□□ -2.31
YCK3YER123W NPT1P39683 429 aaKnown RBP0.59□□□□□ -2.31
YCK3YER123W CDC40P40968 455 aaPredicted RBP0.59□□□□□ -2.31
YCK3YER123W RPL10P41805 221 aaKnown RBP0.59□□□□□ -2.31
YCK3YER123W SED1Q01589 338 aa0.59□□□□□ -2.31
YCK3YER123W SPO19Q03029 223 aa0.59□□□□□ -2.31
YCK3YER123W ARO80Q04052 950 aa0.59□□□□□ -2.31
YCK3YER123W KAP95Q06142 861 aaKnown RBP0.59□□□□□ -2.31
YCK3YER123W CTR3Q06686 241 aa0.59□□□□□ -2.31
YCK3YER123W PET494P07390 489 aaPredicted RBP0.58□□□□□ -2.32
YCK3YER123W PUT1P09368 476 aa0.58□□□□□ -2.32
YCK3YER123W MRP1P10662 321 aaKnown RBP0.58□□□□□ -2.32
YCK3YER123W SCM4P32564 187 aa0.58□□□□□ -2.32
YCK3YER123W CLG1P35190 452 aa0.58□□□□□ -2.32
YCK3YER123W PEX18P38855 283 aa0.58□□□□□ -2.32
YCK3YER123W YER121WP40076 114 aa0.58□□□□□ -2.32
YCK3YER123W ICE2P40499 491 aa0.58□□□□□ -2.32
YCK3YER123W TIM13P53299 105 aa0.58□□□□□ -2.32
YCK3YER123W FMP41P53889 259 aaKnown RBP0.58□□□□□ -2.32
YCK3YER123W TRM12Q04235 462 aa0.58□□□□□ -2.32
YCK3YER123W PEX12Q04370 399 aa0.58□□□□□ -2.32
YCK3YER123W SMT3Q12306 101 aaKnown RBP0.58□□□□□ -2.32
YCK3YER123W ATO3Q12359 275 aa0.58□□□□□ -2.32
YCK3YER123W MHT1Q12525 324 aa0.58□□□□□ -2.32
YCK3YER123W YOS9Q99220 542 aa0.58□□□□□ -2.32
YCK3YER123W RPS3P05750 240 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W RPC40P07703 335 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W TPM1P17536 199 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W MGM101P32787 269 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W GDH2P33327 1092 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W TRS20P38334 175 aa0.57□□□□□ -2.32
YCK3YER123W HSM3P38348 480 aa0.57□□□□□ -2.32
YCK3YER123W GIM4P40005 111 aaKnown RBP0.57□□□□□ -2.32
YCK3YER123W FIP1P45976 327 aa0.57□□□□□ -2.32
YCK3YER123W HOC1P47124 396 aa0.57□□□□□ -2.32
YCK3YER123W SPP2Q02521 185 aa0.57□□□□□ -2.32
YCK3YER123W ERV41Q04651 352 aa0.57□□□□□ -2.32
YCK3YER123W BOP2Q06150 570 aa0.57□□□□□ -2.32
YCK3YER123W RAF1Q06891 181 aa0.57□□□□□ -2.32
YCK3YER123W GIS3Q12418 502 aa0.57□□□□□ -2.32
YCK3YER123W SAS5Q99314 248 aa0.57□□□□□ -2.32
YCK3YER123W JIP3O13555 125 aa0.57□□□□□ -2.32
YCK3YER123W MEK1P24719 497 aaPredicted RBP0.57□□□□□ -2.32
YCK3YER123W PRM9P39551 298 aa0.57□□□□□ -2.32
YCK3YER123W YEL075CP39972 122 aa0.57□□□□□ -2.32
YCK3YER123W AGX1P43567 385 aa0.57□□□□□ -2.32
YCK3YER123W RPA43P46669 326 aa0.57□□□□□ -2.32
YCK3YER123W SNX4P47057 423 aa0.57□□□□□ -2.32
YCK3YER123W YJL028WP47062 111 aa0.57□□□□□ -2.32
YCK3YER123W YJR012CP47087 207 aa0.57□□□□□ -2.32
YCK3YER123W YGL185CP53100 379 aa0.57□□□□□ -2.32
YCK3YER123W AAH1P53909 347 aa0.57□□□□□ -2.32
YCK3YER123W ASI3P53983 676 aa0.57□□□□□ -2.32
YCK3YER123W DAD3P69850 94 aa0.57□□□□□ -2.32
YCK3YER123W VBA1Q04301 562 aa0.57□□□□□ -2.32
YCK3YER123W GMC2Q06201 188 aa0.57□□□□□ -2.32
YCK3YER123W EMP46Q12396 444 aa0.57□□□□□ -2.32
YCK3YER123W OCA6Q12454 224 aa0.57□□□□□ -2.32
YCK3YER123W YCL048W-AQ2V2Q2 79 aa0.57□□□□□ -2.32
YCK3YER123W YBL008W-AQ3E821 79 aa0.57□□□□□ -2.32
YCK3YER123W RPL24AP04449 155 aaKnown RBP0.56□□□□□ -2.32
YCK3YER123W YSF3P0C074 85 aaPredicted RBP0.56□□□□□ -2.32
YCK3YER123W TAH1P25638 111 aaPredicted RBP0.56□□□□□ -2.32
YCK3YER123W VTC1P40046 129 aaRIP-Chip data0.56□□□□□ -2.32not detected
YCK3YER123W YER189WP40104 122 aa0.56□□□□□ -2.32
YCK3YER123W PEP8P40335 379 aa0.56□□□□□ -2.32
YCK3YER123W ADO1P47143 340 aaKnown RBP0.56□□□□□ -2.32
YCK3YER123W TIM8P57744 87 aa0.56□□□□□ -2.32
YCK3YER123W SDC1Q03323 175 aa0.56□□□□□ -2.32
YCK3YER123W SEI1Q06058 285 aa0.56□□□□□ -2.32
YCK3YER123W YPR174CQ06616 221 aaPredicted RBP0.56□□□□□ -2.32
YCK3YER123W SWC7Q06707 132 aa0.56□□□□□ -2.32
YCK3YER123W FMP16Q12497 93 aa0.56□□□□□ -2.32
YCK3YER123W YPL229WQ99395 206 aa0.56□□□□□ -2.32
YCK3YER123W CDC7P06243 507 aa0.55□□□□□ -2.32
YCK3YER123W YOL162WP0CF19 215 aa0.55□□□□□ -2.32
YCK3YER123W YHR214C-DP0CX93 97 aa0.55□□□□□ -2.32
YCK3YER123W POF1P25576 258 aa0.55□□□□□ -2.32
YCK3YER123W RCN1P36054 211 aa0.55□□□□□ -2.32
YCK3YER123W YKL070WP36087 169 aa0.55□□□□□ -2.32
YCK3YER123W MRPL39P36533 70 aa0.55□□□□□ -2.32
YCK3YER123W YHL049CP38722 271 aa0.55□□□□□ -2.32
YCK3YER123W COS8P38723 381 aa0.55□□□□□ -2.32
YCK3YER123W YHB1P39676 399 aaKnown RBP0.55□□□□□ -2.32
YCK3YER123W YEL028WP39989 153 aa0.55□□□□□ -2.32
YCK3YER123W RFC4P40339 323 aaKnown RBP0.55□□□□□ -2.32
YCK3YER123W GLR1P41921 483 aaKnown RBP0.55□□□□□ -2.32
YCK3YER123W LOC1P43586 204 aaPredicted RBP0.55□□□□□ -2.32
YCK3YER123W GCD14P46959 383 aaPredicted RBP0.55□□□□□ -2.32
YCK3YER123W OST2P46964 130 aa0.55□□□□□ -2.32
YCK3YER123W MDM34P53083 459 aa0.55□□□□□ -2.32
YCK3YER123W YGR026WP53217 278 aa0.55□□□□□ -2.32
YCK3YER123W MAL13P53338 473 aa0.55□□□□□ -2.32
YCK3YER123W ATC1Q04005 294 aa0.55□□□□□ -2.32
YCK3YER123W YDR124WQ04608 324 aa0.55□□□□□ -2.32
YCK3YER123W YPR147CQ06522 304 aaKnown RBP0.55□□□□□ -2.32
YCK3YER123W YPR011CQ12251 326 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms