RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C TFC7Q12415 435 aa6.6□□□□□ -1.35
PUP3YER094C YBR298C-AQ8TGK4 73 aa6.6□□□□□ -1.35
PUP3YER094C YUH1P35127 236 aa6.59□□□□□ -1.35
PUP3YER094C GEP4P38812 185 aa6.59□□□□□ -1.35
PUP3YER094C POP2P39008 433 aa6.59□□□□□ -1.35
PUP3YER094C SSO2P39926 295 aa6.59□□□□□ -1.35
PUP3YER094C PRM5P40476 318 aa6.59□□□□□ -1.35
PUP3YER094C SLM1P40485 686 aa6.59□□□□□ -1.35
PUP3YER094C ACT1P60010 375 aaKnown RBP6.59□□□□□ -1.35
PUP3YER094C YFH1Q07540 174 aa6.59□□□□□ -1.35
PUP3YER094C RRT7Q07829 113 aa6.59□□□□□ -1.35
PUP3YER094C PML1Q07930 204 aaPredicted RBP6.59□□□□□ -1.35
PUP3YER094C ALG6Q12001 544 aaKnown RBP6.59□□□□□ -1.35
PUP3YER094C RTR2Q12378 196 aa6.59□□□□□ -1.35
PUP3YER094C YLR146W-AQ2V2P1 62 aa6.59□□□□□ -1.35
PUP3YER094C HUG1Q6Q5K6 68 aa6.59□□□□□ -1.35
PUP3YER094C ERG2P32352 222 aa6.58□□□□□ -1.36
PUP3YER094C PDC2P32896 925 aa6.58□□□□□ -1.36
PUP3YER094C ERV15P38312 142 aa6.58□□□□□ -1.36
PUP3YER094C GAT2P40209 560 aa6.58□□□□□ -1.36
PUP3YER094C GLR1P41921 483 aaKnown RBP6.58□□□□□ -1.36
PUP3YER094C PIR5P46999 287 aa6.58□□□□□ -1.36
PUP3YER094C YJR111CP47148 283 aaKnown RBP6.58□□□□□ -1.36
PUP3YER094C XPT1P47165 209 aa6.58□□□□□ -1.36
PUP3YER094C PKP2P53170 491 aa6.58□□□□□ -1.36
PUP3YER094C MRPL22P53881 309 aa6.58□□□□□ -1.36
PUP3YER094C VPS28Q02767 242 aa6.58□□□□□ -1.36
PUP3YER094C PRP11Q07350 266 aaPredicted RBP6.58□□□□□ -1.36
PUP3YER094C YOL029CQ08187 201 aa6.58□□□□□ -1.36
PUP3YER094C YOR292CQ08743 309 aa6.58□□□□□ -1.36
PUP3YER094C WSC3Q12215 556 aa6.58□□□□□ -1.36
PUP3YER094C DGK1Q12382 290 aa6.58□□□□□ -1.36
PUP3YER094C SEC22P22214 214 aa6.57□□□□□ -1.36
PUP3YER094C CTR2P38865 189 aa6.57□□□□□ -1.36
PUP3YER094C RPL13BP40212 199 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C SGN1P40561 250 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
PUP3YER094C PNC1P53184 216 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C ORM1P53224 222 aa6.57□□□□□ -1.36
PUP3YER094C TEX1P53851 422 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C CWC25P53854 179 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C RPL21AQ02753 160 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C ECM18Q04623 453 aa6.57□□□□□ -1.36
PUP3YER094C YDL086WQ07505 273 aa6.57□□□□□ -1.36
PUP3YER094C TMC1Q08422 150 aaPredicted RBP6.57□□□□□ -1.36
PUP3YER094C RPL21BQ12672 160 aaKnown RBP6.57□□□□□ -1.36
PUP3YER094C RPL13AQ12690 199 aaPredicted RBP6.57□□□□□ -1.36
PUP3YER094C GDH1P07262 454 aaKnown RBP6.56□□□□□ -1.36
PUP3YER094C VMA7P39111 118 aa6.56□□□□□ -1.36
PUP3YER094C SIT1P39980 628 aa6.56□□□□□ -1.36
PUP3YER094C SNX4P47057 423 aa6.56□□□□□ -1.36
PUP3YER094C TAD2P47058 250 aa6.56□□□□□ -1.36
PUP3YER094C YGL262WP53054 175 aa6.56□□□□□ -1.36
PUP3YER094C GEP7P53171 287 aa6.56□□□□□ -1.36
PUP3YER094C PEF1P53238 335 aa6.56□□□□□ -1.36
PUP3YER094C YNR064CP53750 290 aa6.56□□□□□ -1.36
PUP3YER094C DID2P69771 204 aa6.56□□□□□ -1.36
PUP3YER094C ANT1Q06497 328 aa6.56□□□□□ -1.36
PUP3YER094C YOR029WQ12243 111 aa6.56□□□□□ -1.36
PUP3YER094C ATG31Q12421 196 aa6.56□□□□□ -1.36
PUP3YER094C FMP16Q12497 93 aa6.56□□□□□ -1.36
PUP3YER094C YCL048W-AQ2V2Q2 79 aa6.56□□□□□ -1.36
PUP3YER094C LSB5P25369 354 aa6.55□□□□□ -1.36
PUP3YER094C COQ2P32378 372 aa6.55□□□□□ -1.36
PUP3YER094C LSM12P38828 187 aaKnown RBP6.55□□□□□ -1.36
PUP3YER094C IKI1P38874 309 aa6.55□□□□□ -1.36
PUP3YER094C SYG1P40528 902 aa6.55□□□□□ -1.36
PUP3YER094C TTI2P47168 421 aa6.55□□□□□ -1.36
PUP3YER094C WSC2P53832 503 aa6.55□□□□□ -1.36
PUP3YER094C GPI15P53961 229 aa6.55□□□□□ -1.36
PUP3YER094C ASM4Q05166 528 aa6.55□□□□□ -1.36
PUP3YER094C SNA4Q07549 140 aa6.55□□□□□ -1.36
PUP3YER094C IRC25Q07951 179 aa6.55□□□□□ -1.36
PUP3YER094C YMR105W-AQ8TGS8 64 aa6.55□□□□□ -1.36
PUP3YER094C ISN1Q99312 450 aa6.55□□□□□ -1.36
PUP3YER094C TCA17P32613 152 aa6.54□□□□□ -1.36
PUP3YER094C ISC10P32645 267 aa6.54□□□□□ -1.36
PUP3YER094C CPR5P35176 225 aa6.54□□□□□ -1.36
PUP3YER094C CUE1P38428 203 aa6.54□□□□□ -1.36
PUP3YER094C YHC3P47040 408 aa6.54□□□□□ -1.36
PUP3YER094C YJR012CP47087 207 aa6.54□□□□□ -1.36
PUP3YER094C SBH2P52871 88 aa6.54□□□□□ -1.36
PUP3YER094C SMM1P53720 384 aaKnown RBP6.54□□□□□ -1.36
PUP3YER094C LPP1Q04396 274 aa6.54□□□□□ -1.36
PUP3YER094C ERP1Q05359 219 aaKnown RBP6.54□□□□□ -1.36
PUP3YER094C FCF2Q12035 217 aaPredicted RBP6.54□□□□□ -1.36
PUP3YER094C YDL009CQ12210 107 aa6.54□□□□□ -1.36
PUP3YER094C ATP10P18496 279 aa6.53□□□□□ -1.36
PUP3YER094C SOR1P35497 357 aaKnown RBP6.53□□□□□ -1.36
PUP3YER094C YHL044WP38727 235 aa6.53□□□□□ -1.36
PUP3YER094C GCV3P39726 170 aaPredicted RBP6.53□□□□□ -1.36
PUP3YER094C YGL117WP53133 265 aa6.53□□□□□ -1.36
PUP3YER094C MSO1P53604 210 aaKnown RBP6.53□□□□□ -1.36
PUP3YER094C INN1P53901 409 aa6.53□□□□□ -1.36
PUP3YER094C YPD1Q07688 167 aa6.53□□□□□ -1.36
PUP3YER094C SOR2Q07786 357 aa6.53□□□□□ -1.36
PUP3YER094C PAM18Q07914 168 aa6.53□□□□□ -1.36
PUP3YER094C SPO24Q3E752 67 aa6.53□□□□□ -1.36
PUP3YER094C GAR1P28007 205 aaKnown RBP6.52□□□□□ -1.37
PUP3YER094C REC104P33323 182 aa6.52□□□□□ -1.37
PUP3YER094C ASP1P38986 381 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms