RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W SNZ1Q03148 297 aa0.68□□□□□ -2.3
LCD1YDR499W CSI2Q08054 341 aa0.68□□□□□ -2.3
LCD1YDR499W YKL183C-AQ3E765 70 aa0.68□□□□□ -2.3
LCD1YDR499W TSC3Q3E790 80 aa0.68□□□□□ -2.3
LCD1YDR499W RPL28P02406 149 aaKnown RBP0.68□□□□□ -2.3
LCD1YDR499W YBR121C-AP0C5L4 52 aa0.68□□□□□ -2.3
LCD1YDR499W TCA17P32613 152 aa0.68□□□□□ -2.3
LCD1YDR499W YKR045CP36138 183 aa0.68□□□□□ -2.3
LCD1YDR499W MRPL28P36527 147 aa0.68□□□□□ -2.3
LCD1YDR499W SIP3P38717 1229 aa0.68□□□□□ -2.3
LCD1YDR499W YNL217WP40152 326 aa0.68□□□□□ -2.3
LCD1YDR499W YRB2P40517 327 aa0.68□□□□□ -2.3
LCD1YDR499W GCN20P43535 752 aaKnown RBP0.68□□□□□ -2.3
LCD1YDR499W ADO1P47143 340 aaKnown RBP0.68□□□□□ -2.3
LCD1YDR499W YNR077CP53758 84 aa0.68□□□□□ -2.3
LCD1YDR499W SWP1Q02795 286 aa0.68□□□□□ -2.3
LCD1YDR499W GAS3Q03655 524 aa0.68□□□□□ -2.3
LCD1YDR499W YLR162WQ06235 118 aa0.68□□□□□ -2.3
LCD1YDR499W JLP1Q12358 412 aa0.68□□□□□ -2.3
LCD1YDR499W TDA8Q6B2U8 126 aa0.68□□□□□ -2.3
LCD1YDR499W NCB2Q92317 146 aa0.68□□□□□ -2.3
LCD1YDR499W CYR1P08678 2026 aaKnown RBP0.67□□□□□ -2.3
LCD1YDR499W FLO9P39712 1322 aa0.67□□□□□ -2.3
LCD1YDR499W SEC4P07560 215 aaKnown RBP0.67□□□□□ -2.3
LCD1YDR499W NHP6BP11633 99 aaKnown RBP0.67□□□□□ -2.3
LCD1YDR499W MRPS28P21771 286 aa0.67□□□□□ -2.3
LCD1YDR499W FZF1P32805 299 aa0.67□□□□□ -2.3
LCD1YDR499W PRP18P33411 251 aaPredicted RBP0.67□□□□□ -2.3
LCD1YDR499W MRPL17P36528 281 aa0.67□□□□□ -2.3
LCD1YDR499W UMP1P38293 148 aa0.67□□□□□ -2.3
LCD1YDR499W TCD1P38756 429 aa0.67□□□□□ -2.3
LCD1YDR499W GLE2P40066 365 aa0.67□□□□□ -2.3
LCD1YDR499W IRC18P47056 224 aa0.67□□□□□ -2.3
LCD1YDR499W MGA1P53050 456 aa0.67□□□□□ -2.3
LCD1YDR499W RNH1Q04740 348 aa0.67□□□□□ -2.3
LCD1YDR499W RUD3Q12234 484 aaKnown RBP0.67□□□□□ -2.3
LCD1YDR499W ARG80P07249 177 aa0.66□□□□□ -2.3
LCD1YDR499W STE18P18852 110 aa0.66□□□□□ -2.3
LCD1YDR499W YGL010WP25338 174 aa0.66□□□□□ -2.3
LCD1YDR499W SEC17P32602 292 aa0.66□□□□□ -2.3
LCD1YDR499W PRX1P34227 261 aaKnown RBP0.66□□□□□ -2.3
LCD1YDR499W YET1P35723 206 aa0.66□□□□□ -2.3
LCD1YDR499W CBT1P36038 271 aaPredicted RBP0.66□□□□□ -2.3
LCD1YDR499W UTP30P36144 274 aaKnown RBP0.66□□□□□ -2.3
LCD1YDR499W YBR220CP38318 560 aa0.66□□□□□ -2.3
LCD1YDR499W GAA1P39012 614 aa0.66□□□□□ -2.3
LCD1YDR499W YNL194CP40169 301 aa0.66□□□□□ -2.3
LCD1YDR499W MCP1Q12106 302 aa0.66□□□□□ -2.3
LCD1YDR499W PDR18P53756 1333 aa0.66□□□□□ -2.3
LCD1YDR499W YDR157WA0A023PZE8 133 aa0.66□□□□□ -2.3
LCD1YDR499W GCN3P14741 305 aa0.66□□□□□ -2.3
LCD1YDR499W COQ1P18900 473 aa0.66□□□□□ -2.3
LCD1YDR499W SNC2P33328 115 aa0.66□□□□□ -2.3
LCD1YDR499W SKG1P36169 355 aa0.66□□□□□ -2.3
LCD1YDR499W GVP36P40531 326 aaKnown RBP0.66□□□□□ -2.3
LCD1YDR499W RAD17P48581 401 aa0.66□□□□□ -2.3
LCD1YDR499W CWC23P52868 283 aaPredicted RBP0.66□□□□□ -2.3
LCD1YDR499W YGR050CP53231 118 aa0.66□□□□□ -2.3
LCD1YDR499W PDR17P53844 350 aa0.66□□□□□ -2.3
LCD1YDR499W YDR249CQ03787 373 aa0.66□□□□□ -2.3
LCD1YDR499W UBR2Q07963 1872 aa0.65□□□□□ -2.3
LCD1YDR499W TIM9O74700 87 aa0.65□□□□□ -2.3
LCD1YDR499W CDC33P07260 213 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W RPL2AP0CX45 254 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W RPL2BP0CX46 254 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W FPR1P20081 114 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W TAF14P35189 244 aa0.65□□□□□ -2.3
LCD1YDR499W TMA19P35691 167 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W RMD6P39975 231 aa0.65□□□□□ -2.3
LCD1YDR499W EAF6P47128 113 aa0.65□□□□□ -2.3
LCD1YDR499W PGA2P53903 129 aa0.65□□□□□ -2.3
LCD1YDR499W NUP49Q02199 472 aa0.65□□□□□ -2.3
LCD1YDR499W PET191Q02772 108 aa0.65□□□□□ -2.3
LCD1YDR499W MZM1Q03429 123 aaPredicted RBP0.65□□□□□ -2.3
LCD1YDR499W FSF1Q12029 327 aaKnown RBP0.65□□□□□ -2.3
LCD1YDR499W YPL162CQ12042 273 aa0.65□□□□□ -2.3
LCD1YDR499W YHR214C-EQ8TGK0 99 aa0.65□□□□□ -2.3
LCD1YDR499W TUS1Q06412 1307 aa0.65□□□□□ -2.31
LCD1YDR499W URA5P13298 226 aaKnown RBP0.65□□□□□ -2.31
LCD1YDR499W KSS1P14681 368 aa0.65□□□□□ -2.31
LCD1YDR499W BET1P22804 142 aa0.65□□□□□ -2.31
LCD1YDR499W IDH1P28834 360 aaKnown RBP RIP-Chip data0.65□□□□□ -2.31not detected
LCD1YDR499W MGM101P32787 269 aaKnown RBP0.65□□□□□ -2.31
LCD1YDR499W UPS2P35200 230 aa0.65□□□□□ -2.31
LCD1YDR499W RPL13BP40212 199 aaKnown RBP0.65□□□□□ -2.31
LCD1YDR499W TIM11P81449 96 aaPredicted RBP0.65□□□□□ -2.31
LCD1YDR499W ANT1Q06497 328 aa0.65□□□□□ -2.31
LCD1YDR499W GPM2Q12008 311 aa0.65□□□□□ -2.31
LCD1YDR499W RPL13AQ12690 199 aaPredicted RBP0.65□□□□□ -2.31
LCD1YDR499W YFR032C-BQ8TGU2 87 aa0.65□□□□□ -2.31
LCD1YDR499W YIL177CP40434 1758 aa0.65□□□□□ -2.31
LCD1YDR499W YJL225CP40889 1758 aa0.65□□□□□ -2.31
LCD1YDR499W MET5P47169 1442 aa0.65□□□□□ -2.31
LCD1YDR499W MER1P16523 270 aa0.64□□□□□ -2.31
LCD1YDR499W PTM1P32857 523 aa0.64□□□□□ -2.31
LCD1YDR499W SHE2P36068 246 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
LCD1YDR499W YCR087C-AP37263 153 aa0.64□□□□□ -2.31
LCD1YDR499W YBR285WP38354 144 aa0.64□□□□□ -2.31
LCD1YDR499W IKI1P38874 309 aa0.64□□□□□ -2.31
LCD1YDR499W AST2P39945 430 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms