RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	YMD8	Q03697	442 aa		1.13	□□□□□ -2.23
REF2	YDR195W	TRM12	Q04235	462 aa		1.13	□□□□□ -2.23
REF2	YDR195W	LPP1	Q04396	274 aa		1.13	□□□□□ -2.23
REF2	YDR195W	RUD3	Q12234	484 aa	Known RBP	1.13	□□□□□ -2.23
REF2	YDR195W	VAR1	P02381	398 aa		1.12	□□□□□ -2.23
REF2	YDR195W	YBR121C-A	P0C5L4	52 aa		1.12	□□□□□ -2.23
REF2	YDR195W	NHP6B	P11633	99 aa	Known RBP	1.12	□□□□□ -2.23
REF2	YDR195W	DBF2	P22204	572 aa		1.12	□□□□□ -2.23
REF2	YDR195W	ERG28	P40030	148 aa		1.12	□□□□□ -2.23
REF2	YDR195W	BXI1	P48558	297 aa		1.12	□□□□□ -2.23
REF2	YDR195W	PRM8	P53174	237 aa		1.12	□□□□□ -2.23
REF2	YDR195W	TIM11	P81449	96 aa	Predicted RBP	1.12	□□□□□ -2.23
REF2	YDR195W	SPG3	Q04398	127 aa	Predicted RBP	1.12	□□□□□ -2.23
REF2	YDR195W	DRS2	P39524	1355 aa		1.12	□□□□□ -2.23
REF2	YDR195W	ARG80	P07249	177 aa		1.11	□□□□□ -2.23
REF2	YDR195W	TMA19	P35691	167 aa	Known RBP	1.11	□□□□□ -2.23
REF2	YDR195W	YRB1	P41920	201 aa	Known RBP	1.11	□□□□□ -2.23
REF2	YDR195W	FAR7	P43592	221 aa		1.11	□□□□□ -2.23
REF2	YDR195W	MGA1	P53050	456 aa		1.11	□□□□□ -2.23
REF2	YDR195W	BOL2	P53082	120 aa		1.11	□□□□□ -2.23
REF2	YDR195W	YDR248C	Q03786	193 aa		1.11	□□□□□ -2.23
REF2	YDR195W	NCB2	Q92317	146 aa		1.11	□□□□□ -2.23
REF2	YDR195W	RPL28	P02406	149 aa	Known RBP	1.11	□□□□□ -2.23
REF2	YDR195W	CDC33	P07260	213 aa	Known RBP	1.11	□□□□□ -2.23
REF2	YDR195W	YLR156W	P0CE96	114 aa		1.11	□□□□□ -2.23
REF2	YDR195W	YLR159W	P0CE97	114 aa		1.11	□□□□□ -2.23
REF2	YDR195W	YLR161W	P0CE98	114 aa		1.11	□□□□□ -2.23
REF2	YDR195W	COQ1	P18900	473 aa		1.11	□□□□□ -2.23
REF2	YDR195W	ATG22	P25568	528 aa		1.11	□□□□□ -2.23
REF2	YDR195W	FZF1	P32805	299 aa		1.11	□□□□□ -2.23
REF2	YDR195W	PRX1	P34227	261 aa	Known RBP	1.11	□□□□□ -2.23
REF2	YDR195W	CBT1	P36038	271 aa	Predicted RBP	1.11	□□□□□ -2.23
REF2	YDR195W	SIP3	P38717	1229 aa		1.11	□□□□□ -2.23
REF2	YDR195W	YNL194C	P40169	301 aa		1.11	□□□□□ -2.23
REF2	YDR195W	RAD17	P48581	401 aa		1.11	□□□□□ -2.23
REF2	YDR195W	MPA43	P53583	542 aa	Predicted RBP	1.11	□□□□□ -2.23
REF2	YDR195W	TDA8	Q6B2U8	126 aa		1.11	□□□□□ -2.23
REF2	YDR195W	YDR157W	A0A023PZE8	133 aa		1.1	□□□□□ -2.23
REF2	YDR195W	STE18	P18852	110 aa		1.1	□□□□□ -2.23
REF2	YDR195W	TCA17	P32613	152 aa		1.1	□□□□□ -2.23
REF2	YDR195W	PRP18	P33411	251 aa	Predicted RBP	1.1	□□□□□ -2.23
REF2	YDR195W	APS1	P35181	156 aa		1.1	□□□□□ -2.23
REF2	YDR195W	POP4	P38336	279 aa		1.1	□□□□□ -2.23
REF2	YDR195W	PGD1	P40356	397 aa		1.1	□□□□□ -2.23
REF2	YDR195W	ADO1	P47143	340 aa	Known RBP	1.1	□□□□□ -2.23
REF2	YDR195W	CWC23	P52868	283 aa	Predicted RBP	1.1	□□□□□ -2.23
REF2	YDR195W	AIF1	P52923	378 aa		1.1	□□□□□ -2.23
REF2	YDR195W	JLP1	Q12358	412 aa		1.1	□□□□□ -2.23
REF2	YDR195W	QCR8	P08525	94 aa		1.09	□□□□□ -2.23
REF2	YDR195W	RPL27B	P0C2H7	136 aa	Known RBP	1.09	□□□□□ -2.23
REF2	YDR195W	SEC17	P32602	292 aa		1.09	□□□□□ -2.23
REF2	YDR195W	YNL217W	P40152	326 aa		1.09	□□□□□ -2.23
REF2	YDR195W	IRC18	P47056	224 aa		1.09	□□□□□ -2.23
REF2	YDR195W	PDR17	P53844	350 aa		1.09	□□□□□ -2.23
REF2	YDR195W	PGA2	P53903	129 aa		1.09	□□□□□ -2.23
REF2	YDR195W	SNZ1	Q03148	297 aa		1.09	□□□□□ -2.23
REF2	YDR195W	GAS3	Q03655	524 aa		1.09	□□□□□ -2.23
REF2	YDR195W	YPL162C	Q12042	273 aa		1.09	□□□□□ -2.23
REF2	YDR195W	GIS3	Q12418	502 aa		1.09	□□□□□ -2.23
REF2	YDR195W	SEC4	P07560	215 aa	Known RBP	1.08	□□□□□ -2.24
REF2	YDR195W	GCN3	P14741	305 aa		1.08	□□□□□ -2.24
REF2	YDR195W	TAF14	P35189	244 aa		1.08	□□□□□ -2.24
REF2	YDR195W	MRPL28	P36527	147 aa		1.08	□□□□□ -2.24
REF2	YDR195W	YRB2	P40517	327 aa		1.08	□□□□□ -2.24
REF2	YDR195W	DOC1	P53068	250 aa		1.08	□□□□□ -2.24
REF2	YDR195W	PET191	Q02772	108 aa		1.08	□□□□□ -2.24
REF2	YDR195W	SWP1	Q02795	286 aa		1.08	□□□□□ -2.24
REF2	YDR195W	MCP1	Q12106	302 aa		1.08	□□□□□ -2.24
REF2	YDR195W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	1.07	□□□□□ -2.24	not detected
REF2	YDR195W	UTP30	P36144	274 aa	Known RBP	1.07	□□□□□ -2.24
REF2	YDR195W	MRPL17	P36528	281 aa		1.07	□□□□□ -2.24
REF2	YDR195W	YGR050C	P53231	118 aa		1.07	□□□□□ -2.24
REF2	YDR195W	TIM9	O74700	87 aa		1.07	□□□□□ -2.24
REF2	YDR195W	MRPS28	P21771	286 aa		1.07	□□□□□ -2.24
REF2	YDR195W	UMP1	P38293	148 aa		1.07	□□□□□ -2.24
REF2	YDR195W	YNR077C	P53758	84 aa		1.07	□□□□□ -2.24
REF2	YDR195W	UBC7	Q02159	165 aa		1.07	□□□□□ -2.24
REF2	YDR195W	ANT1	Q06497	328 aa		1.07	□□□□□ -2.24
REF2	YDR195W	TSC3	Q3E790	80 aa		1.07	□□□□□ -2.24
REF2	YDR195W	YHR214C-E	Q8TGK0	99 aa		1.07	□□□□□ -2.24
REF2	YDR195W	TUS1	Q06412	1307 aa		1.06	□□□□□ -2.24
REF2	YDR195W	RPB4	P20433	221 aa	Predicted RBP	1.06	□□□□□ -2.24
REF2	YDR195W	RFA3	P26755	122 aa	Known RBP	1.06	□□□□□ -2.24
REF2	YDR195W	NTG1	P31378	399 aa		1.06	□□□□□ -2.24
REF2	YDR195W	MGM101	P32787	269 aa	Known RBP	1.06	□□□□□ -2.24
REF2	YDR195W	SKG1	P36169	355 aa		1.06	□□□□□ -2.24
REF2	YDR195W	IKI1	P38874	309 aa		1.06	□□□□□ -2.24
REF2	YDR195W	YER076C	P40049	302 aa		1.06	□□□□□ -2.24
REF2	YDR195W	YDR249C	Q03787	373 aa		1.06	□□□□□ -2.24
REF2	YDR195W	BNA7	Q04066	261 aa		1.06	□□□□□ -2.24
REF2	YDR195W	CDC36	P06100	191 aa	Predicted RBP	1.05	□□□□□ -2.24
REF2	YDR195W	KSS1	P14681	368 aa		1.05	□□□□□ -2.24
REF2	YDR195W	YET1	P35723	206 aa		1.05	□□□□□ -2.24
REF2	YDR195W	KDX1	P36005	433 aa		1.05	□□□□□ -2.24
REF2	YDR195W	YCR087C-A	P37263	153 aa		1.05	□□□□□ -2.24
REF2	YDR195W	GAA1	P39012	614 aa		1.05	□□□□□ -2.24
REF2	YDR195W	RMD6	P39975	231 aa		1.05	□□□□□ -2.24
REF2	YDR195W	GVP36	P40531	326 aa	Known RBP	1.05	□□□□□ -2.24
REF2	YDR195W	LSM7	P53905	115 aa	Known RBP	1.05	□□□□□ -2.24
REF2	YDR195W	COG5	P53951	403 aa		1.05	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms