RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C YBR063CP38083 404 aa2.21□□□□□ -2.06
RRI1YDL216C YHR022CP38763 256 aa2.21□□□□□ -2.06
RRI1YDL216C DSE2P38844 325 aa2.21□□□□□ -2.06
RRI1YDL216C YJR149WP47177 404 aa2.21□□□□□ -2.06
RRI1YDL216C CYT2Q00873 224 aa2.21□□□□□ -2.06
RRI1YDL216C BUD3P25558 1636 aa2.21□□□□□ -2.06
RRI1YDL216C YHR180WP38868 163 aa2.2□□□□□ -2.06
RRI1YDL216C BCY1P07278 416 aaKnown RBP2.19□□□□□ -2.06
RRI1YDL216C DDI2P0CH63 225 aa2.19□□□□□ -2.06
RRI1YDL216C DDI3P0CH64 225 aa2.19□□□□□ -2.06
RRI1YDL216C PRM10P42946 383 aa2.19□□□□□ -2.06
RRI1YDL216C DID2P69771 204 aa2.19□□□□□ -2.06
RRI1YDL216C DCN1Q12395 269 aa2.19□□□□□ -2.06
RRI1YDL216C MSN4P33749 630 aa2.18□□□□□ -2.06
RRI1YDL216C SVP26P38869 228 aa2.18□□□□□ -2.06
RRI1YDL216C PEX17P40155 199 aa2.18□□□□□ -2.06
RRI1YDL216C TRM9P49957 279 aa2.18□□□□□ -2.06
RRI1YDL216C NSA1P53136 463 aaPredicted RBP2.18□□□□□ -2.06
RRI1YDL216C ERV29P53337 310 aa2.18□□□□□ -2.06
RRI1YDL216C YMD8Q03697 442 aa2.18□□□□□ -2.06
RRI1YDL216C LSO2Q3E772 92 aaKnown RBP2.18□□□□□ -2.06
RRI1YDL216C GDB1Q06625 1536 aa2.18□□□□□ -2.06
RRI1YDL216C CDC8P00572 216 aa2.17□□□□□ -2.06
RRI1YDL216C SPT3P06844 337 aa2.17□□□□□ -2.06
RRI1YDL216C VPS21P36017 210 aaKnown RBP2.17□□□□□ -2.06
RRI1YDL216C RPC17P47076 161 aa2.17□□□□□ -2.06
RRI1YDL216C LIA1P47120 325 aaKnown RBP2.17□□□□□ -2.06
RRI1YDL216C VTH1P40438 1549 aa2.17□□□□□ -2.06
RRI1YDL216C VTH2P40890 1549 aa2.17□□□□□ -2.06
RRI1YDL216C YSP2Q06681 1438 aa2.17□□□□□ -2.06
RRI1YDL216C TRM3Q07527 1436 aa2.17□□□□□ -2.06
RRI1YDL216C YRF1-2P40105 1681 aa2.17□□□□□ -2.06
RRI1YDL216C CDC10P25342 322 aaKnown RBP2.17□□□□□ -2.06
RRI1YDL216C NTF2P33331 125 aaKnown RBP2.17□□□□□ -2.06
RRI1YDL216C YER135CP40082 130 aa2.17□□□□□ -2.06
RRI1YDL216C PRE6P40303 254 aaKnown RBP2.17□□□□□ -2.06
RRI1YDL216C SPP41P38904 1435 aa2.16□□□□□ -2.06
RRI1YDL216C YHR139C-AO13536 103 aa2.16□□□□□ -2.06
RRI1YDL216C PET9P18239 318 aaKnown RBP2.16□□□□□ -2.06
RRI1YDL216C AVT2P39981 480 aa2.16□□□□□ -2.06
RRI1YDL216C COX15P40086 486 aa2.16□□□□□ -2.06
RRI1YDL216C TOS8P53147 276 aa2.16□□□□□ -2.06
RRI1YDL216C YNR062CP53748 327 aa2.16□□□□□ -2.06
RRI1YDL216C YNL010WP53981 241 aaKnown RBP2.16□□□□□ -2.06
RRI1YDL216C BUD25P85052 153 aa2.16□□□□□ -2.06
RRI1YDL216C PSF1Q12488 208 aa2.16□□□□□ -2.06
RRI1YDL216C YBT1P32386 1661 aa2.15□□□□□ -2.06
RRI1YDL216C CFT1Q06632 1357 aaKnown RBP2.15□□□□□ -2.07
RRI1YDL216C MEI4P29467 408 aa2.15□□□□□ -2.07
RRI1YDL216C AGE2P40529 298 aa2.15□□□□□ -2.07
RRI1YDL216C RPL33BP41056 107 aaKnown RBP2.15□□□□□ -2.07
RRI1YDL216C YPR170W-BP0C5R9 85 aa2.14□□□□□ -2.07
RRI1YDL216C YOL162WP0CF19 215 aa2.14□□□□□ -2.07
RRI1YDL216C MATALPHA1P0CY06 175 aa2.14□□□□□ -2.07
RRI1YDL216C HMLALPHA1P0CY07 175 aa2.14□□□□□ -2.07
RRI1YDL216C SSO1P32867 290 aa2.14□□□□□ -2.07
RRI1YDL216C PGD1P40356 397 aa2.14□□□□□ -2.07
RRI1YDL216C ICE2P40499 491 aa2.14□□□□□ -2.07
RRI1YDL216C NOP13P53883 403 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RRI1YDL216C NUP188P52593 1655 aaKnown RBP2.13□□□□□ -2.07
RRI1YDL216C DOG2P38773 246 aa2.13□□□□□ -2.07
RRI1YDL216C IRC22P40006 225 aa2.13□□□□□ -2.07
RRI1YDL216C YER085CP40058 173 aa2.13□□□□□ -2.07
RRI1YDL216C GCN2P15442 1659 aa2.12□□□□□ -2.07
RRI1YDL216C MYO4P32492 1471 aa2.12□□□□□ -2.07
RRI1YDL216C YOR1P53049 1477 aa2.12□□□□□ -2.07
RRI1YDL216C URA6P15700 204 aa2.12□□□□□ -2.07
RRI1YDL216C TIR3P40552 269 aa2.12□□□□□ -2.07
RRI1YDL216C MIC26P50087 233 aa2.12□□□□□ -2.07
RRI1YDL216C AIF1P52923 378 aa2.12□□□□□ -2.07
RRI1YDL216C FYV6P53913 173 aa2.12□□□□□ -2.07
RRI1YDL216C LPP1Q04396 274 aa2.12□□□□□ -2.07
RRI1YDL216C IQG1Q12280 1495 aa2.11□□□□□ -2.07
RRI1YDL216C TY1B-NL2Q99337 1749 aaKnown RBP2.11□□□□□ -2.07
RRI1YDL216C IML1P47170 1584 aa2.11□□□□□ -2.07
RRI1YDL216C TOP2P06786 1428 aaKnown RBP2.11□□□□□ -2.07
RRI1YDL216C RPL24BP24000 155 aaKnown RBP2.11□□□□□ -2.07
RRI1YDL216C ATG22P25568 528 aa2.11□□□□□ -2.07
RRI1YDL216C PRM8P53174 237 aa2.11□□□□□ -2.07
RRI1YDL216C TRM12Q04235 462 aa2.11□□□□□ -2.07
RRI1YDL216C SML1Q04964 104 aa2.11□□□□□ -2.07
RRI1YDL216C CDC123Q05791 360 aa2.11□□□□□ -2.07
RRI1YDL216C HAP1P0CE41 1502 aa2.1□□□□□ -2.07
RRI1YDL216C TY3B-GQ99315 1547 aa2.1□□□□□ -2.07
RRI1YDL216C REP2P03872 296 aa2.1□□□□□ -2.07
RRI1YDL216C VMA6P32366 345 aaKnown RBP2.1□□□□□ -2.07
RRI1YDL216C YKR045CP36138 183 aa2.1□□□□□ -2.07
RRI1YDL216C YBR219CP38317 127 aa2.1□□□□□ -2.07
RRI1YDL216C SNQ2P32568 1501 aaKnown RBP2.09□□□□□ -2.07
RRI1YDL216C RRP5Q05022 1729 aaKnown RBP2.09□□□□□ -2.07
RRI1YDL216C RHO1P06780 209 aaKnown RBP2.09□□□□□ -2.08
RRI1YDL216C BRR6P53062 197 aa2.09□□□□□ -2.08
RRI1YDL216C STU1P38198 1513 aa2.08□□□□□ -2.08
RRI1YDL216C TSC11P40061 1430 aa2.08□□□□□ -2.08
RRI1YDL216C MRPS28P21771 286 aa2.08□□□□□ -2.08
RRI1YDL216C YGL010WP25338 174 aa2.08□□□□□ -2.08
RRI1YDL216C SRY1P36007 326 aa2.08□□□□□ -2.08
RRI1YDL216C POP4P38336 279 aa2.08□□□□□ -2.08
RRI1YDL216C BOL2P53082 120 aa2.08□□□□□ -2.08
RRI1YDL216C SNZ1Q03148 297 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms