RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	MSI1	P13712	422 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	SPO13	P23624	291 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	PSK1	P31374	1356 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.84	□□□□□ -1.47	not detected
UBP13	YBL067C	YKR073C	P36153	106 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	YBR063C	P38083	404 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	VPS25	P47142	202 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	YMR181C	Q03231	154 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	SUE1	Q06524	206 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	RPL30	P14120	105 aa	Known RBP	5.84	□□□□□ -1.47
UBP13	YBL067C	SIP2	P34164	415 aa	Known RBP	5.84	□□□□□ -1.47
UBP13	YBL067C	MNN5	P46982	586 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	HHT1	P61830	136 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	CNL1	Q06333	122 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	TFC7	Q12415	435 aa		5.84	□□□□□ -1.47
UBP13	YBL067C	STP22	P25604	385 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	AST2	P39945	430 aa	Known RBP	5.83	□□□□□ -1.48
UBP13	YBL067C	YNL010W	P53981	241 aa	Known RBP	5.83	□□□□□ -1.48
UBP13	YBL067C	TMA23	Q03525	211 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	SNF4	P12904	322 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	COS8	P38723	381 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	YHL026C	P38740	315 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	PGA1	P53896	198 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	ATG39	Q06159	398 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	BSP1	Q06604	576 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	ZEO1	Q08245	113 aa		5.83	□□□□□ -1.48
UBP13	YBL067C	MRPL39	P36533	70 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	YPL073C	P40323	161 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	GLR1	P41921	483 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	YGR017W	P53210	297 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	IDP3	P53982	420 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	APS2	Q00381	147 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	VPS71	Q03433	280 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	ERP1	Q05359	219 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	SYC1	Q08553	188 aa	Predicted RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	MPD1	Q12404	318 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	MBF1	O14467	151 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	RPL25	P04456	142 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	YER039C-A	P0CD97	72 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	COQ2	P32378	372 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	YNK1	P36010	153 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	OST1	P41543	476 aa	Known RBP	5.82	□□□□□ -1.48
UBP13	YBL067C	FIP1	P45976	327 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	HHO1	P53551	258 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	PCL9	Q12477	304 aa		5.82	□□□□□ -1.48
UBP13	YBL067C	AYR1	P40471	297 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	YFR054C	P43622	192 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	OST2	P46964	130 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	AVT1	P47082	602 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	TDA7	P53882	636 aa	Predicted RBP	5.81	□□□□□ -1.48
UBP13	YBL067C	DAD3	P69850	94 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	YMR253C	Q04835	414 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	YOR214C	Q12282	236 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	DNA2	P38859	1522 aa		5.81	□□□□□ -1.48
UBP13	YBL067C	PBI2	P0CT04	75 aa	Known RBP	5.8	□□□□□ -1.48
UBP13	YBL067C	SPT14	P32363	452 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	SFC1	P33303	322 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	ETR1	P38071	380 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	CAT5	P41735	233 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	RPS12	P48589	143 aa	Known RBP	5.8	□□□□□ -1.48
UBP13	YBL067C	MDM34	P53083	459 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	AAH1	P53909	347 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	AIM36	Q03798	255 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	ATP16	Q12165	160 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	ATP14	Q12349	124 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	PIR3	Q03180	325 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	YDL180W	Q12301	547 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	YAL063C-A	Q3E791	96 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	MHP1	P43638	1398 aa		5.8	□□□□□ -1.48
UBP13	YBL067C	Q0255	P03881	472 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	POP8	P38208	133 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	COS10	P52924	374 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	DIG2	Q03373	323 aa	Known RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	HTZ1	Q12692	134 aa	Known RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	YFR032C-B	Q8TGU2	87 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	RPS18A	P0CX55	146 aa	Known RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	RPS18B	P0CX56	146 aa	Predicted RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	PCL1	P24867	279 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	HRR25	P29295	494 aa	Known RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	PRY2	P36110	329 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	GGC1	P38988	300 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	RRG7	Q08774	242 aa	Predicted RBP	5.79	□□□□□ -1.48
UBP13	YBL067C	YLR118C	Q12354	227 aa		5.79	□□□□□ -1.48
UBP13	YBL067C	ATS1	P31386	333 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	IRC22	P40006	225 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	SFT1	P43682	97 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	BUD13	P46947	266 aa	Predicted RBP	5.78	□□□□□ -1.48
UBP13	YBL067C	ADD37	Q03233	198 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	PEX2	P32800	271 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	TKL2	P33315	681 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	SNC2	P33328	115 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	MIX23	P38162	196 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	EDC2	P40023	145 aa	Predicted RBP	5.78	□□□□□ -1.48
UBP13	YBL067C	SDS23	P53172	527 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	YPR011C	Q12251	326 aa		5.78	□□□□□ -1.48
UBP13	YBL067C	FMP49	A0A023PZB3	126 aa		5.77	□□□□□ -1.49
UBP13	YBL067C	CKS1	P20486	150 aa	Known RBP	5.77	□□□□□ -1.49
UBP13	YBL067C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
UBP13	YBL067C	UTP30	P36144	274 aa	Known RBP	5.77	□□□□□ -1.49
UBP13	YBL067C	SCP1	Q08873	200 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms