RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeastyeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP13YBL067C DRS1P32892 752 aaKnown RBP14.23□□□□□ -0.13
UBP13YBL067C TFA1P36100 482 aa13.55□□□□□ -0.24
UBP13YBL067C BFR2Q06631 534 aaKnown RBP13.02□□□□□ -0.33
UBP13YBL067C TAF7Q05021 590 aa12.82□□□□□ -0.36
UBP13YBL067C RQC2Q12532 1038 aaKnown RBP12.74□□□□□ -0.37
UBP13YBL067C MTC1P47018 478 aaKnown RBP12.49□□□□□ -0.41
UBP13YBL067C AVT3P36062 692 aa12.02□□□□□ -0.48
UBP13YBL067C DMA1P38823 416 aa11.87□□□□□ -0.51
UBP13YBL067C LEO1P38439 464 aa11.62□□□□□ -0.55
UBP13YBL067C DIP2Q12220 943 aaPredicted RBP11.55□□□□□ -0.56
UBP13YBL067C ABP1P15891 592 aaKnown RBP11.02□□□□□ -0.65
UBP13YBL067C LEU3P08638 886 aa10.88□□□□□ -0.67
UBP13YBL067C IFH1P39520 1085 aa10.88□□□□□ -0.67
UBP13YBL067C IOC4Q04213 475 aa10.86□□□□□ -0.67
UBP13YBL067C DMA2P53924 522 aa10.82□□□□□ -0.68
UBP13YBL067C NAP1P25293 417 aaKnown RBP10.74□□□□□ -0.69
UBP13YBL067C PTP3P40048 928 aa10.71□□□□□ -0.69
UBP13YBL067C SAS10Q12136 610 aaPredicted RBP10.7□□□□□ -0.7
UBP13YBL067C ORC1P54784 914 aaPredicted RBP10.66□□□□□ -0.7
UBP13YBL067C URN1Q06525 465 aaKnown RBP10.66□□□□□ -0.7
UBP13YBL067C RLF2Q12495 606 aa10.46□□□□□ -0.73
UBP13YBL067C AIM44Q99299 758 aa10.36□□□□□ -0.75
UBP13YBL067C RPN1P38764 993 aaKnown RBP10.33□□□□□ -0.76
UBP13YBL067C RSE1Q04693 1361 aaKnown RBP10.3□□□□□ -0.76
UBP13YBL067C SSP1P38871 571 aa10.24□□□□□ -0.77
UBP13YBL067C YML020WQ03722 664 aa10.15□□□□□ -0.78
UBP13YBL067C NOP8Q08287 484 aaPredicted RBP10.14□□□□□ -0.79
UBP13YBL067C CKB1P43639 278 aa10.11□□□□□ -0.79
UBP13YBL067C RIM101P33400 625 aa10.02□□□□□ -0.81
UBP13YBL067C SNU71P53207 620 aaKnown RBP9.97□□□□□ -0.81
UBP13YBL067C TOP1P04786 769 aa9.95□□□□□ -0.82
UBP13YBL067C ATG36P46983 293 aa9.91□□□□□ -0.82
UBP13YBL067C YRB30P53107 440 aaPredicted RBP9.91□□□□□ -0.82
UBP13YBL067C RPL17AP05740 184 aaKnown RBP9.89□□□□□ -0.83
UBP13YBL067C OXP1P28273 1286 aa9.89□□□□□ -0.83
UBP13YBL067C RPL17BP46990 184 aaKnown RBP9.89□□□□□ -0.83
UBP13YBL067C SPT21P35209 758 aa9.87□□□□□ -0.83
UBP13YBL067C SLX8P40072 274 aa9.87□□□□□ -0.83
UBP13YBL067C YLR271WQ06152 274 aa9.86□□□□□ -0.83
UBP13YBL067C MRX12P47084 519 aa9.8□□□□□ -0.84
UBP13YBL067C MAM3Q12296 706 aa9.8□□□□□ -0.84
UBP13YBL067C LAM6Q08001 693 aa9.79□□□□□ -0.84
UBP13YBL067C KIN1P13185 1064 aa9.79□□□□□ -0.84
UBP13YBL067C SPB4P25808 606 aaPredicted RBP9.78□□□□□ -0.84
UBP13YBL067C SWE1P32944 819 aa9.78□□□□□ -0.84
UBP13YBL067C YAH1Q12184 172 aaKnown RBP9.78□□□□□ -0.84
UBP13YBL067C BRL1P38770 471 aa9.74□□□□□ -0.85
UBP13YBL067C GEF1P37020 779 aa9.72□□□□□ -0.85
UBP13YBL067C PAM1P37304 830 aaKnown RBP9.71□□□□□ -0.85
UBP13YBL067C CST9Q06032 482 aa9.71□□□□□ -0.86
UBP13YBL067C SUB2Q07478 446 aaKnown RBP9.71□□□□□ -0.86
UBP13YBL067C YPR148CQ06523 435 aa9.7□□□□□ -0.86
UBP13YBL067C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.68□□□□□ -0.86not detected
UBP13YBL067C SSA1P10591 642 aaKnown RBP9.67□□□□□ -0.86
UBP13YBL067C MGA2P40578 1113 aa9.67□□□□□ -0.86
UBP13YBL067C GUA1P38625 525 aaKnown RBP9.67□□□□□ -0.86
UBP13YBL067C FAR11P53917 953 aa9.66□□□□□ -0.86
UBP13YBL067C VPS70P47161 811 aa9.64□□□□□ -0.87
UBP13YBL067C NOP7P53261 605 aaKnown RBP9.64□□□□□ -0.87
UBP13YBL067C SPC42P36094 363 aa9.63□□□□□ -0.87
UBP13YBL067C DSF2P38213 736 aa9.63□□□□□ -0.87
UBP13YBL067C NUG1P40010 520 aaKnown RBP9.63□□□□□ -0.87
UBP13YBL067C TPO2P53283 614 aa9.59□□□□□ -0.87
UBP13YBL067C GLC3P32775 704 aa9.58□□□□□ -0.88
UBP13YBL067C YNR021WP53723 404 aaKnown RBP9.58□□□□□ -0.88
UBP13YBL067C YTA7P40340 1379 aa9.56□□□□□ -0.88
UBP13YBL067C RPG1P38249 964 aaKnown RBP9.56□□□□□ -0.88
UBP13YBL067C SET1P38827 1080 aaKnown RBP9.56□□□□□ -0.88
UBP13YBL067C BRN1P38170 754 aa9.56□□□□□ -0.88
UBP13YBL067C MDG1P53885 366 aa9.56□□□□□ -0.88
UBP13YBL067C JSN1P47135 1091 aaKnown RBP RIP-Chip data9.55□□□□□ -0.88not detected
UBP13YBL067C ISW2Q08773 1120 aa9.55□□□□□ -0.88
UBP13YBL067C RAM2P29703 316 aa9.54□□□□□ -0.88
UBP13YBL067C RRN6P32786 894 aa9.52□□□□□ -0.88
UBP13YBL067C OCA5P38738 679 aa9.52□□□□□ -0.88
UBP13YBL067C MET10P39692 1035 aa9.52□□□□□ -0.89
UBP13YBL067C YJR008WP47085 338 aa9.51□□□□□ -0.89
UBP13YBL067C DOS2P54858 310 aa9.51□□□□□ -0.89
UBP13YBL067C KRI1P42846 591 aaKnown RBP9.51□□□□□ -0.89
UBP13YBL067C SEN54Q02825 467 aaPredicted RBP9.5□□□□□ -0.89
UBP13YBL067C AIM7Q12156 149 aa9.49□□□□□ -0.89
UBP13YBL067C SSF1P38789 453 aaPredicted RBP9.48□□□□□ -0.89
UBP13YBL067C GIN4Q12263 1142 aa9.48□□□□□ -0.89
UBP13YBL067C REB1P21538 810 aa9.47□□□□□ -0.89
UBP13YBL067C YFR016CP43597 1233 aaKnown RBP9.46□□□□□ -0.89
UBP13YBL067C RTS3P53289 263 aa9.46□□□□□ -0.89
UBP13YBL067C PBS2P08018 668 aa9.46□□□□□ -0.9
UBP13YBL067C TFB3Q03290 321 aa9.46□□□□□ -0.9
UBP13YBL067C PKC1P24583 1151 aa9.44□□□□□ -0.9
UBP13YBL067C DIT2P21595 489 aa9.44□□□□□ -0.9
UBP13YBL067C GLN1P32288 370 aaKnown RBP9.43□□□□□ -0.9
UBP13YBL067C NUP42P49686 430 aaKnown RBP9.42□□□□□ -0.9
UBP13YBL067C BUD21Q08492 214 aaPredicted RBP9.41□□□□□ -0.9
UBP13YBL067C HGH1P48362 394 aaKnown RBP9.4□□□□□ -0.91
UBP13YBL067C ALD4P46367 519 aaKnown RBP9.39□□□□□ -0.91
UBP13YBL067C PSD2P53037 1138 aaKnown RBP9.39□□□□□ -0.91
UBP13YBL067C HPC2Q01448 625 aa9.39□□□□□ -0.91
UBP13YBL067C YIL055CP40523 627 aaKnown RBP9.36□□□□□ -0.91
UBP13YBL067C ASF1P32447 279 aa9.35□□□□□ -0.91
UBP13YBL067C RSM7P47150 247 aa9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms