RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	OCH1	P31755	480 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YHL037C	P38733	133 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	LNP1	P38878	278 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	CCS1	P40202	249 aa	Known RBP	4.61	□□□□□ -1.67
GEP3	YOR205C	GWT1	P47026	490 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	SLX9	P53251	210 aa	Predicted RBP	4.61	□□□□□ -1.67
GEP3	YOR205C	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	RTT103	Q05543	409 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YLR224W	Q05947	369 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	GAL1	P04385	528 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	IMP1	P28627	190 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	TRR1	P29509	319 aa	Known RBP	4.6	□□□□□ -1.67
GEP3	YOR205C	YKL107W	P34251	309 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	AIM46	P38885	310 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	PHM8	P40025	321 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	IRC24	P40580	263 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	UBP8	P50102	471 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	SOL1	P50278	321 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	NIF3	P53081	288 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	JAC1	P53193	184 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	COA4	Q05809	96 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	MRL1	Q06815	381 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	WTM2	Q12206	467 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	BBP1	Q12365	385 aa		4.6	□□□□□ -1.67
GEP3	YOR205C	YBR056W-A	I2HB52	66 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	TPI1	P00942	248 aa	Known RBP	4.59	□□□□□ -1.67
GEP3	YOR205C	PUT1	P09368	476 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	CUP1-1	P0CX80	61 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	CUP1-2	P0CX81	61 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	SEN2	P16658	377 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	OSH7	P38755	437 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	YER121W	P40076	114 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	YIR035C	P40579	254 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	BLM10	P43583	2143 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	RPA34	P47006	233 aa	Predicted RBP	4.59	□□□□□ -1.67
GEP3	YOR205C	SKO1	Q02100	647 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	YMR279C	Q03263	540 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	TSA2	Q04120	196 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	API2	Q04413	109 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	LIP2	Q06005	328 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	FEX2	Q08991	375 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	RTR2	Q12378	196 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	MPD1	Q12404	318 aa	Known RBP	4.59	□□□□□ -1.67
GEP3	YOR205C	YLR365W	Q7LIF2	110 aa		4.59	□□□□□ -1.67
GEP3	YOR205C	CKS1	P20486	150 aa	Known RBP	4.58	□□□□□ -1.68
GEP3	YOR205C	MIR1	P23641	311 aa	Known RBP	4.58	□□□□□ -1.68
GEP3	YOR205C	AGA2	P32781	87 aa		4.58	□□□□□ -1.68
GEP3	YOR205C	SPC29	P33419	253 aa		4.58	□□□□□ -1.68
GEP3	YOR205C	NTC20	P38302	140 aa	Predicted RBP	4.58	□□□□□ -1.68
GEP3	YOR205C	YGP1	P38616	354 aa	Known RBP	4.58	□□□□□ -1.68
GEP3	YOR205C	NOC4	Q06512	552 aa	Predicted RBP	4.58	□□□□□ -1.68
GEP3	YOR205C	YOL029C	Q08187	201 aa		4.58	□□□□□ -1.68
GEP3	YOR205C	FEX1	Q08913	375 aa		4.58	□□□□□ -1.68
GEP3	YOR205C	TEL1	P38110	2787 aa		4.58	□□□□□ -1.68
GEP3	YOR205C	QCR2	P07257	368 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YCR061W	P25639	631 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	RPB7	P34087	171 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	SWD3	P38123	315 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YPC1	P38298	316 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	RPL13B	P40212	199 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	QRI1	P43123	477 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	BNA2	P47125	453 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	SED1	Q01589	338 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	THI74	Q04083	370 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	GMC1	Q04399	608 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	FIT1	Q04433	528 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	DPB4	Q04603	196 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	PRP11	Q07350	266 aa	Predicted RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	FRE8	Q12209	686 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	RPL13A	Q12690	199 aa	Predicted RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	YGL194C-A	Q2V2P6	80 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	SPS100	P13130	326 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	FUS3	P16892	353 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	TIP1	P27654	210 aa	Predicted RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	MRP20	P32387	263 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YUH1	P35127	236 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	SWD2	P36104	329 aa	Predicted RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	GLY1	P37303	387 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	VMA7	P39111	118 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	PAC2	P39937	518 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	RMD6	P39975	231 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	SNX4	P47057	423 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	PKP2	P53170	491 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YNL092W	P53934	400 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	ACT1	P60010	375 aa	Known RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	HED1	Q03937	162 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YDR114C	Q04597	100 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	GAT3	Q07928	141 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	FCF2	Q12035	217 aa	Predicted RBP	4.57	□□□□□ -1.68
GEP3	YOR205C	YCT1	Q12235	531 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YLR146W-A	Q2V2P1	62 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YPR108W-A	Q3E7B3	70 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	YBR298C-A	Q8TGK4	73 aa		4.57	□□□□□ -1.68
GEP3	YOR205C	TOR1	P35169	2470 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	RPL39	P04650	51 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	SSA3	P09435	649 aa	Known RBP	4.56	□□□□□ -1.68
GEP3	YOR205C	DAL80	P26343	269 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	TCA17	P32613	152 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	PDC2	P32896	925 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	YOX1	P34161	385 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms