RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W TFB5Q3E7C1 72 aaPredicted RBP5.09□□□□□ -1.59
ATG4YNL223W UBA3Q99344 299 aa5.09□□□□□ -1.59
ATG4YNL223W RPL25P04456 142 aaKnown RBP5.08□□□□□ -1.6
ATG4YNL223W SPS4P09937 338 aa5.08□□□□□ -1.6
ATG4YNL223W SEN2P16658 377 aa5.08□□□□□ -1.6
ATG4YNL223W SEC22P22214 214 aa5.08□□□□□ -1.6
ATG4YNL223W MAK32P23060 363 aa5.08□□□□□ -1.6
ATG4YNL223W YCR101CP25607 182 aa5.08□□□□□ -1.6
ATG4YNL223W OCH1P31755 480 aa5.08□□□□□ -1.6
ATG4YNL223W CLB6P32943 380 aa5.08□□□□□ -1.6
ATG4YNL223W SWM2P40342 146 aa5.08□□□□□ -1.6
ATG4YNL223W JAC1P53193 184 aa5.08□□□□□ -1.6
ATG4YNL223W PIN3Q06449 215 aa5.08□□□□□ -1.6
ATG4YNL223W FEX1Q08913 375 aa5.08□□□□□ -1.6
ATG4YNL223W VAM3Q12241 283 aa5.08□□□□□ -1.6
ATG4YNL223W MED4Q12343 284 aa5.08□□□□□ -1.6
ATG4YNL223W TFC7Q12415 435 aa5.08□□□□□ -1.6
ATG4YNL223W EAF3Q12432 401 aa5.08□□□□□ -1.6
ATG4YNL223W MAG1P22134 296 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W MRP20P32387 263 aa5.07□□□□□ -1.6
ATG4YNL223W COS8P38723 381 aa5.07□□□□□ -1.6
ATG4YNL223W CCS1P40202 249 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W EGT2P42835 1041 aa5.07□□□□□ -1.6
ATG4YNL223W YFL051CP43552 160 aa5.07□□□□□ -1.6
ATG4YNL223W RPS0BP46654 252 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W TAD2P47058 250 aa5.07□□□□□ -1.6
ATG4YNL223W ALG12P53730 551 aa5.07□□□□□ -1.6
ATG4YNL223W THI74Q04083 370 aa5.07□□□□□ -1.6
ATG4YNL223W CRR1Q05790 422 aa5.07□□□□□ -1.6
ATG4YNL223W RRP15Q06511 250 aaPredicted RBP5.07□□□□□ -1.6
ATG4YNL223W YDL086WQ07505 273 aa5.07□□□□□ -1.6
ATG4YNL223W RNH203Q12338 110 aa5.07□□□□□ -1.6
ATG4YNL223W MPD1Q12404 318 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W ATG31Q12421 196 aa5.07□□□□□ -1.6
ATG4YNL223W YLR365WQ7LIF2 110 aa5.07□□□□□ -1.6
ATG4YNL223W CDC39P25655 2108 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W QCR2P07257 368 aa5.07□□□□□ -1.6
ATG4YNL223W CKA1P15790 372 aa5.07□□□□□ -1.6
ATG4YNL223W RPI1P23250 407 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W VMA3P25515 160 aa5.07□□□□□ -1.6
ATG4YNL223W TIP1P27654 210 aaPredicted RBP5.07□□□□□ -1.6
ATG4YNL223W IMP1P28627 190 aa5.07□□□□□ -1.6
ATG4YNL223W RPB7P34087 171 aa5.07□□□□□ -1.6
ATG4YNL223W SWD2P36104 329 aaPredicted RBP5.07□□□□□ -1.6
ATG4YNL223W NAT2P37293 288 aa5.07□□□□□ -1.6
ATG4YNL223W SWD3P38123 315 aa5.07□□□□□ -1.6
ATG4YNL223W PRS2P38620 318 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W LAG1P38703 411 aa5.07□□□□□ -1.6
ATG4YNL223W YHL037CP38733 133 aa5.07□□□□□ -1.6
ATG4YNL223W LNP1P38878 278 aa5.07□□□□□ -1.6
ATG4YNL223W PIG2P40187 538 aa5.07□□□□□ -1.6
ATG4YNL223W YMR144WP40214 342 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W BMT5P40493 336 aa5.07□□□□□ -1.6
ATG4YNL223W YIR035CP40579 254 aa5.07□□□□□ -1.6
ATG4YNL223W MRX5P47007 382 aa5.07□□□□□ -1.6
ATG4YNL223W YJR111CP47148 283 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W HNT2P49775 206 aa5.07□□□□□ -1.6
ATG4YNL223W SLX9P53251 210 aaPredicted RBP5.07□□□□□ -1.6
ATG4YNL223W YDC1Q02896 317 aa5.07□□□□□ -1.6
ATG4YNL223W ANT1Q06497 328 aa5.07□□□□□ -1.6
ATG4YNL223W AEP3Q12089 606 aa5.07□□□□□ -1.6
ATG4YNL223W FRE8Q12209 686 aa5.07□□□□□ -1.6
ATG4YNL223W PRS5Q12265 496 aaKnown RBP5.07□□□□□ -1.6
ATG4YNL223W COX17Q12287 69 aa5.07□□□□□ -1.6
ATG4YNL223W YJR112W-AQ3E743 109 aa5.07□□□□□ -1.6
ATG4YNL223W IPP1P00817 287 aaKnown RBP5.06□□□□□ -1.6
ATG4YNL223W POP2P39008 433 aa5.06□□□□□ -1.6
ATG4YNL223W RPA34P47006 233 aaPredicted RBP5.06□□□□□ -1.6
ATG4YNL223W TAF4P50105 388 aa5.06□□□□□ -1.6
ATG4YNL223W SOL1P50278 321 aa5.06□□□□□ -1.6
ATG4YNL223W UBC13P52490 153 aa5.06□□□□□ -1.6
ATG4YNL223W DID2P69771 204 aa5.06□□□□□ -1.6
ATG4YNL223W ACS1Q01574 713 aa5.06□□□□□ -1.6
ATG4YNL223W YMR254CQ04838 102 aa5.06□□□□□ -1.6
ATG4YNL223W YDR286CQ05530 114 aa5.06□□□□□ -1.6
ATG4YNL223W NOC4Q06512 552 aaPredicted RBP5.06□□□□□ -1.6
ATG4YNL223W MRL1Q06815 381 aa5.06□□□□□ -1.6
ATG4YNL223W GRC3Q07845 632 aa5.06□□□□□ -1.6
ATG4YNL223W YPR108W-AQ3E7B3 70 aa5.06□□□□□ -1.6
ATG4YNL223W FUS3P16892 353 aaKnown RBP5.05□□□□□ -1.6
ATG4YNL223W OLE1P21147 510 aaKnown RBP5.05□□□□□ -1.6
ATG4YNL223W DBP2P24783 546 aaKnown RBP5.05□□□□□ -1.6
ATG4YNL223W VMA8P32610 256 aaKnown RBP5.05□□□□□ -1.6
ATG4YNL223W EMP24P32803 203 aaKnown RBP5.05□□□□□ -1.6
ATG4YNL223W PDC2P32896 925 aa5.05□□□□□ -1.6
ATG4YNL223W SRY1P36007 326 aa5.05□□□□□ -1.6
ATG4YNL223W SOH1P38633 127 aa5.05□□□□□ -1.6
ATG4YNL223W GPI16P38875 610 aa5.05□□□□□ -1.6
ATG4YNL223W YHC3P47040 408 aa5.05□□□□□ -1.6
ATG4YNL223W UPS1Q05776 175 aa5.05□□□□□ -1.6
ATG4YNL223W YCT1Q12235 531 aa5.05□□□□□ -1.6
ATG4YNL223W WHI5Q12416 295 aa5.05□□□□□ -1.6
ATG4YNL223W ATG40Q99325 256 aa5.05□□□□□ -1.6
ATG4YNL223W YBR085C-AO43137 85 aa5.04□□□□□ -1.6
ATG4YNL223W MNS1P32906 549 aa5.04□□□□□ -1.6
ATG4YNL223W YOX1P34161 385 aa5.04□□□□□ -1.6
ATG4YNL223W NTC20P38302 140 aaPredicted RBP5.04□□□□□ -1.6
ATG4YNL223W OSH7P38755 437 aa5.04□□□□□ -1.6
ATG4YNL223W PRM5P40476 318 aa5.04□□□□□ -1.6
ATG4YNL223W IRC24P40580 263 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms