RNA–Protein interactions for RNA: YNL085W

MKT1, Transcript of Protein similar to nucleases that forms a complex with Pbp1p, yeast

Gene MKT1, Length 2,493 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MKT1	YNL085W	TPO4	Q12256	659 aa		0.9	□□□□□ -2.27
MKT1	YNL085W	CFT1	Q06632	1357 aa	Known RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	CDC7	P06243	507 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	MATALPHA1	P0CY06	175 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	HMLALPHA1	P0CY07	175 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	NTF2	P33331	125 aa	Known RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	VPS21	P36017	210 aa	Known RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	YBR063C	P38083	404 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	ERV15	P38312	142 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	BMT5	P40493	336 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	LIA1	P47120	325 aa	Known RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	TRM9	P49957	279 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	ERV29	P53337	310 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	ABF2	Q02486	183 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	CDC8	P00572	216 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	SPT3	P06844	337 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	DDI2	P0CH63	225 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	DDI3	P0CH64	225 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	CDC10	P25342	322 aa	Known RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	YHR022C	P38763	256 aa		0.89	□□□□□ -2.27
MKT1	YNL085W	NSA1	P53136	463 aa	Predicted RBP	0.89	□□□□□ -2.27
MKT1	YNL085W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.89	□□□□□ -2.27	not detected
MKT1	YNL085W	MDH2	P22133	377 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	YER085C	P40058	173 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	PRM10	P42946	383 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	DID2	P69771	204 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	YKR045C	P36138	183 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	DSE2	P38844	325 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	SVP26	P38869	228 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	VTC1	P40046	129 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
MKT1	YNL085W	PRE6	P40303	254 aa	Known RBP	0.88	□□□□□ -2.27
MKT1	YNL085W	YNR062C	P53748	327 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	YNL010W	P53981	241 aa	Known RBP	0.88	□□□□□ -2.27
MKT1	YNL085W	YML108W	Q03759	105 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	PSF1	Q12488	208 aa		0.88	□□□□□ -2.27
MKT1	YNL085W	LSO2	Q3E772	92 aa	Known RBP	0.88	□□□□□ -2.27
MKT1	YNL085W	YPR170W-B	P0C5R9	85 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	PET9	P18239	318 aa	Known RBP	0.87	□□□□□ -2.27
MKT1	YNL085W	AVT2	P39981	480 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	YER135C	P40082	130 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	COX15	P40086	486 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	MIC26	P50087	233 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	YMD8	Q03697	442 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	TRM12	Q04235	462 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	UBR2	Q07963	1872 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	MEI4	P29467	408 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	IRC22	P40006	225 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	RPL33B	P41056	107 aa	Known RBP	0.87	□□□□□ -2.27
MKT1	YNL085W	DCN1	Q12395	269 aa		0.87	□□□□□ -2.27
MKT1	YNL085W	RHO1	P06780	209 aa	Known RBP	0.86	□□□□□ -2.27
MKT1	YNL085W	URA6	P15700	204 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	RPL24B	P24000	155 aa	Known RBP	0.86	□□□□□ -2.27
MKT1	YNL085W	SSO1	P32867	290 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	SRY1	P36007	326 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	ICE2	P40499	491 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	AGE2	P40529	298 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	FYV6	P53913	173 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	CDC123	Q05791	360 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	REP2	P03872	296 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	VMA6	P32366	345 aa	Known RBP	0.86	□□□□□ -2.27
MKT1	YNL085W	DOG2	P38773	246 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	PGD1	P40356	397 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	BUD25	P85052	153 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	LPP1	Q04396	274 aa		0.86	□□□□□ -2.27
MKT1	YNL085W	SPG3	Q04398	127 aa	Predicted RBP	0.86	□□□□□ -2.27
MKT1	YNL085W	DRS2	P39524	1355 aa		0.85	□□□□□ -2.27
MKT1	YNL085W	THP2	O13539	261 aa	Known RBP	0.85	□□□□□ -2.27
MKT1	YNL085W	ATG22	P25568	528 aa		0.85	□□□□□ -2.27
MKT1	YNL085W	URA8	P38627	578 aa	Predicted RBP	0.85	□□□□□ -2.27
MKT1	YNL085W	AIF1	P52923	378 aa		0.85	□□□□□ -2.27
MKT1	YNL085W	SEY1	Q99287	776 aa		0.85	□□□□□ -2.27
MKT1	YNL085W	CDC28	P00546	298 aa	Known RBP	0.84	□□□□□ -2.27
MKT1	YNL085W	YMR31	P19955	123 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	POP4	P38336	279 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	MIC12	P38341	106 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	TIR3	P40552	269 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	BRR6	P53062	197 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	PRM8	P53174	237 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	SML1	Q04964	104 aa		0.84	□□□□□ -2.27
MKT1	YNL085W	RPL27B	P0C2H7	136 aa	Known RBP	0.84	□□□□□ -2.28
MKT1	YNL085W	YLR156W	P0CE96	114 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	YLR159W	P0CE97	114 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	YLR161W	P0CE98	114 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	PPA2	P28239	310 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	BMH2	P34730	273 aa	Known RBP	0.84	□□□□□ -2.28
MKT1	YNL085W	YBR219C	P38317	127 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	RTR1	P40084	226 aa	Predicted RBP	0.84	□□□□□ -2.28
MKT1	YNL085W	OTU1	P43558	301 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	FAR7	P43592	221 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	BOL2	P53082	120 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	ALG13	P53178	202 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	YDR248C	Q03786	193 aa		0.84	□□□□□ -2.28
MKT1	YNL085W	APS1	P35181	156 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	RTC3	P38804	111 aa	Predicted RBP	0.83	□□□□□ -2.28
MKT1	YNL085W	YRB2	P40517	327 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	NUP57	P48837	541 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	DOC1	P53068	250 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	SNZ1	Q03148	297 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	YKL183C-A	Q3E765	70 aa		0.83	□□□□□ -2.28
MKT1	YNL085W	RPL28	P02406	149 aa	Known RBP	0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms