RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YML096WQ04489 525 aa0.98□□□□□ -2.25
SLX4YLR135W SSQ1Q05931 657 aaPredicted RBP0.98□□□□□ -2.25
SLX4YLR135W YLR179CQ06252 201 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W CLP1Q08685 445 aaPredicted RBP0.98□□□□□ -2.25
SLX4YLR135W NIP7Q08962 181 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W YPL257WQ08974 193 aa0.98□□□□□ -2.25
SLX4YLR135W GET4Q12125 312 aa0.98□□□□□ -2.25
SLX4YLR135W BBP1Q12365 385 aa0.98□□□□□ -2.25
SLX4YLR135W SAS5Q99314 248 aa0.98□□□□□ -2.25
SLX4YLR135W YDR157WA0A023PZE8 133 aa0.97□□□□□ -2.25
SLX4YLR135W YHR139C-AO13536 103 aa0.97□□□□□ -2.25
SLX4YLR135W RPL28P02406 149 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W ADH3P07246 375 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W SEC4P07560 215 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W GRX2P17695 143 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W RFA3P26755 122 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W TCA17P32613 152 aa0.97□□□□□ -2.25
SLX4YLR135W CLB6P32943 380 aa0.97□□□□□ -2.25
SLX4YLR135W APS1P35181 156 aa0.97□□□□□ -2.25
SLX4YLR135W YKR032WP36127 104 aa0.97□□□□□ -2.25
SLX4YLR135W ECM33P38248 429 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W YHR125WP38831 101 aa0.97□□□□□ -2.25
SLX4YLR135W CTR2P38865 189 aa0.97□□□□□ -2.25
SLX4YLR135W IRC22P40006 225 aa0.97□□□□□ -2.25
SLX4YLR135W FIS1P40515 155 aa0.97□□□□□ -2.25
SLX4YLR135W FAR7P43592 221 aa0.97□□□□□ -2.25
SLX4YLR135W BXI1P48558 297 aa0.97□□□□□ -2.25
SLX4YLR135W ALG13P53178 202 aa0.97□□□□□ -2.25
SLX4YLR135W YGR026WP53217 278 aa0.97□□□□□ -2.25
SLX4YLR135W YDR248CQ03786 193 aa0.97□□□□□ -2.25
SLX4YLR135W ABP140Q08641 628 aaKnown RBP0.97□□□□□ -2.25
SLX4YLR135W VPS68Q12016 184 aa0.97□□□□□ -2.25
SLX4YLR135W YPK2P18961 677 aa0.97□□□□□ -2.25
SLX4YLR135W IDH1P28834 360 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
SLX4YLR135W YCR087C-AP37263 153 aa0.97□□□□□ -2.25
SLX4YLR135W DOG1P38774 246 aa0.97□□□□□ -2.25
SLX4YLR135W DIA1P54005 336 aa0.97□□□□□ -2.25
SLX4YLR135W AKR2Q12013 749 aa0.97□□□□□ -2.25
SLX4YLR135W TUS1Q06412 1307 aa0.96□□□□□ -2.25
SLX4YLR135W CDC28P00546 298 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W HTB1P02293 131 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W HTB2P02294 131 aa0.96□□□□□ -2.26
SLX4YLR135W RPL9AP05738 191 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W MGM101P32787 269 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W DOG2P38773 246 aa0.96□□□□□ -2.26
SLX4YLR135W YAR068WP39564 161 aa0.96□□□□□ -2.26
SLX4YLR135W YJR146WP47174 117 aa0.96□□□□□ -2.26
SLX4YLR135W RPL9BP51401 191 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W COS6P53344 381 aa0.96□□□□□ -2.26
SLX4YLR135W PDR17P53844 350 aa0.96□□□□□ -2.26
SLX4YLR135W APJ1P53940 528 aa0.96□□□□□ -2.26
SLX4YLR135W YNL010WP53981 241 aaKnown RBP0.96□□□□□ -2.26
SLX4YLR135W YCL012CQ8J0M4 134 aa0.96□□□□□ -2.26
SLX4YLR135W DRS2P39524 1355 aa0.96□□□□□ -2.26
SLX4YLR135W GCN3P14741 305 aa0.96□□□□□ -2.26
SLX4YLR135W DBF2P22204 572 aa0.96□□□□□ -2.26
SLX4YLR135W YBR063CP38083 404 aa0.96□□□□□ -2.26
SLX4YLR135W GET1P53192 235 aa0.96□□□□□ -2.26
SLX4YLR135W YMD8Q03697 442 aa0.96□□□□□ -2.26
SLX4YLR135W ATG39Q06159 398 aa0.96□□□□□ -2.26
SLX4YLR135W EMC6Q12431 108 aa0.96□□□□□ -2.26
SLX4YLR135W PSF1Q12488 208 aa0.96□□□□□ -2.26
SLX4YLR135W QCR7P00128 127 aa0.95□□□□□ -2.26
SLX4YLR135W REP2P03872 296 aa0.95□□□□□ -2.26
SLX4YLR135W MATALPHA2P0CY08 210 aa0.95□□□□□ -2.26
SLX4YLR135W HMLALPHA2P0CY09 210 aa0.95□□□□□ -2.26
SLX4YLR135W FCY2P17064 533 aa0.95□□□□□ -2.26
SLX4YLR135W OAC1P32332 324 aa0.95□□□□□ -2.26
SLX4YLR135W UTR5P32630 166 aa0.95□□□□□ -2.26
SLX4YLR135W BMT5P40493 336 aa0.95□□□□□ -2.26
SLX4YLR135W YRB2P40517 327 aa0.95□□□□□ -2.26
SLX4YLR135W SNX4P47057 423 aa0.95□□□□□ -2.26
SLX4YLR135W DAD3P69850 94 aa0.95□□□□□ -2.26
SLX4YLR135W LPP1Q04396 274 aa0.95□□□□□ -2.26
SLX4YLR135W ARR2Q06597 130 aa0.95□□□□□ -2.26
SLX4YLR135W YRA1Q12159 226 aaKnown RBP0.95□□□□□ -2.26
SLX4YLR135W CHD1P32657 1468 aa0.95□□□□□ -2.26
SLX4YLR135W CDC7P06243 507 aa0.95□□□□□ -2.26
SLX4YLR135W YHR032W-AP0C5N6 59 aa0.95□□□□□ -2.26
SLX4YLR135W MAG1P22134 296 aaKnown RBP0.95□□□□□ -2.26
SLX4YLR135W ADE1P27616 306 aa0.95□□□□□ -2.26
SLX4YLR135W MRPL28P36527 147 aa0.95□□□□□ -2.26
SLX4YLR135W POP4P38336 279 aa0.95□□□□□ -2.26
SLX4YLR135W MED6P38782 295 aa0.95□□□□□ -2.26
SLX4YLR135W YGR050CP53231 118 aa0.95□□□□□ -2.26
SLX4YLR135W NOP19P53317 196 aaPredicted RBP0.95□□□□□ -2.26
SLX4YLR135W LSM7P53905 115 aaKnown RBP0.95□□□□□ -2.26
SLX4YLR135W SLM2P53955 656 aa0.95□□□□□ -2.26
SLX4YLR135W CGI121Q03705 181 aaKnown RBP0.95□□□□□ -2.26
SLX4YLR135W ATG38Q05789 226 aaKnown RBP0.95□□□□□ -2.26
SLX4YLR135W MSW1P04803 379 aa0.94□□□□□ -2.26
SLX4YLR135W PUT1P09368 476 aa0.94□□□□□ -2.26
SLX4YLR135W RPL27AP0C2H6 136 aaKnown RBP0.94□□□□□ -2.26
SLX4YLR135W RPL27BP0C2H7 136 aaKnown RBP0.94□□□□□ -2.26
SLX4YLR135W CBF1P17106 351 aa0.94□□□□□ -2.26
SLX4YLR135W MEI4P29467 408 aa0.94□□□□□ -2.26
SLX4YLR135W SEC17P32602 292 aa0.94□□□□□ -2.26
SLX4YLR135W YOR062CP36025 268 aa0.94□□□□□ -2.26
SLX4YLR135W TRM5P38793 499 aa0.94□□□□□ -2.26
SLX4YLR135W PRM10P42946 383 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 187 ms