RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C SRL3P36167 246 aa8.82□□□□□ -1
SHM2YLR058C SWD3P38123 315 aa8.82□□□□□ -1
SHM2YLR058C YER121WP40076 114 aa8.82□□□□□ -1
SHM2YLR058C PEF1P53238 335 aa8.82□□□□□ -1
SHM2YLR058C UPS1Q05776 175 aa8.82□□□□□ -1
SHM2YLR058C FRE8Q12209 686 aa8.82□□□□□ -1
SHM2YLR058C WHI5Q12416 295 aa8.82□□□□□ -1
SHM2YLR058C ATG40Q99325 256 aa8.82□□□□□ -1
SHM2YLR058C UBA3Q99344 299 aa8.82□□□□□ -1
SHM2YLR058C BPH1P25356 2167 aa8.82□□□□□ -1
SHM2YLR058C SEN2P16658 377 aa8.81□□□□□ -1
SHM2YLR058C YCR016WP25617 290 aaKnown RBP8.81□□□□□ -1
SHM2YLR058C MRP17P28778 131 aa8.81□□□□□ -1
SHM2YLR058C POP8P38208 133 aa8.81□□□□□ -1
SHM2YLR058C GLR1P41921 483 aaKnown RBP8.81□□□□□ -1
SHM2YLR058C BNA2P47125 453 aa8.81□□□□□ -1
SHM2YLR058C YNL046WP53956 172 aa8.81□□□□□ -1
SHM2YLR058C SMX3P54999 86 aaPredicted RBP8.81□□□□□ -1
SHM2YLR058C TIM10P87108 93 aa8.81□□□□□ -1
SHM2YLR058C CAC2Q04199 468 aa8.81□□□□□ -1
SHM2YLR058C YLR125WQ12138 136 aa8.81□□□□□ -1
SHM2YLR058C GAL1P04385 528 aa8.8□□□□□ -1
SHM2YLR058C VMA3P25515 160 aa8.8□□□□□ -1
SHM2YLR058C RPB7P34087 171 aa8.8□□□□□ -1
SHM2YLR058C SOL1P50278 321 aa8.8□□□□□ -1
SHM2YLR058C SLX9P53251 210 aaPredicted RBP8.8□□□□□ -1
SHM2YLR058C GMC1Q04399 608 aa8.8□□□□□ -1
SHM2YLR058C SCP1Q08873 200 aa8.8□□□□□ -1
SHM2YLR058C MED4Q12343 284 aa8.8□□□□□ -1
SHM2YLR058C YLR365WQ7LIF2 110 aa8.8□□□□□ -1
SHM2YLR058C ARG80P07249 177 aa8.8□□□□□ -1
SHM2YLR058C CTR2P38865 189 aa8.8□□□□□ -1
SHM2YLR058C SLM1P40485 686 aa8.8□□□□□ -1
SHM2YLR058C TEX1P53851 422 aaKnown RBP8.8□□□□□ -1
SHM2YLR058C TMC1Q08422 150 aaPredicted RBP8.8□□□□□ -1
SHM2YLR058C YOR192C-CQ3E736 78 aa8.8□□□□□ -1
SHM2YLR058C MIR1P23641 311 aaKnown RBP8.79□□□□□ -1
SHM2YLR058C TRR1P29509 319 aaKnown RBP8.79□□□□□ -1
SHM2YLR058C UTP30P36144 274 aaKnown RBP8.79□□□□□ -1
SHM2YLR058C NTC20P38302 140 aaPredicted RBP8.79□□□□□ -1
SHM2YLR058C YDR286CQ05530 114 aa8.79□□□□□ -1
SHM2YLR058C LIP2Q06005 328 aa8.79□□□□□ -1
SHM2YLR058C SNA4Q07549 140 aa8.79□□□□□ -1
SHM2YLR058C YOL118CQ08259 102 aa8.79□□□□□ -1
SHM2YLR058C YBL029C-AQ3E756 94 aa8.79□□□□□ -1
SHM2YLR058C PUT1P09368 476 aa8.78□□□□□ -1
SHM2YLR058C CKA1P15790 372 aa8.78□□□□□ -1
SHM2YLR058C SWD2P36104 329 aaPredicted RBP8.78□□□□□ -1
SHM2YLR058C OSH7P38755 437 aa8.78□□□□□ -1
SHM2YLR058C RRF1P38771 230 aa8.78□□□□□ -1
SHM2YLR058C NIF3P53081 288 aa8.78□□□□□ -1
SHM2YLR058C RTT103Q05543 409 aa8.78□□□□□ -1
SHM2YLR058C FEX2Q08991 375 aa8.78□□□□□ -1
SHM2YLR058C WSC3Q12215 556 aa8.78□□□□□ -1
SHM2YLR058C FUS3P16892 353 aaKnown RBP8.77□□□□□ -1.01
SHM2YLR058C COS8P38723 381 aa8.77□□□□□ -1.01
SHM2YLR058C UBP8P50102 471 aa8.77□□□□□ -1.01
SHM2YLR058C SBH2P52871 88 aa8.77□□□□□ -1.01
SHM2YLR058C CAB5Q03941 241 aa8.77□□□□□ -1.01
SHM2YLR058C FIT1Q04433 528 aa8.77□□□□□ -1.01
SHM2YLR058C AIM46P38885 310 aa8.76□□□□□ -1.01
SHM2YLR058C BFR1P38934 470 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SHM2YLR058C POP2P39008 433 aa8.76□□□□□ -1.01
SHM2YLR058C PRM5P40476 318 aa8.76□□□□□ -1.01
SHM2YLR058C BMT5P40493 336 aa8.76□□□□□ -1.01
SHM2YLR058C YIL012WP40551 113 aa8.76□□□□□ -1.01
SHM2YLR058C SGN1P40561 250 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SHM2YLR058C YGR210CP42942 411 aa8.76□□□□□ -1.01
SHM2YLR058C HSK3P69852 69 aa8.76□□□□□ -1.01
SHM2YLR058C THI74Q04083 370 aa8.76□□□□□ -1.01
SHM2YLR058C TSA2Q04120 196 aa8.76□□□□□ -1.01
SHM2YLR058C RFM1Q12192 310 aa8.76□□□□□ -1.01
SHM2YLR058C YOR029WQ12243 111 aa8.76□□□□□ -1.01
SHM2YLR058C YPR108W-AQ3E7B3 70 aa8.76□□□□□ -1.01
SHM2YLR058C YMR105W-AQ8TGS8 64 aa8.76□□□□□ -1.01
SHM2YLR058C SUA5P32579 426 aa8.75□□□□□ -1.01
SHM2YLR058C RPA34P47006 233 aaPredicted RBP8.75□□□□□ -1.01
SHM2YLR058C XPT1P47165 209 aa8.75□□□□□ -1.01
SHM2YLR058C MRPL22P53881 309 aa8.75□□□□□ -1.01
SHM2YLR058C VAM3Q12241 283 aa8.75□□□□□ -1.01
SHM2YLR058C CKS1P20486 150 aaKnown RBP8.74□□□□□ -1.01
SHM2YLR058C VMA8P32610 256 aaKnown RBP8.74□□□□□ -1.01
SHM2YLR058C YUH1P35127 236 aa8.74□□□□□ -1.01
SHM2YLR058C LAG1P38703 411 aa8.74□□□□□ -1.01
SHM2YLR058C PAC2P39937 518 aa8.74□□□□□ -1.01
SHM2YLR058C PIR5P46999 287 aa8.74□□□□□ -1.01
SHM2YLR058C GEP7P53171 287 aa8.74□□□□□ -1.01
SHM2YLR058C FEX1Q08913 375 aa8.74□□□□□ -1.01
SHM2YLR058C PRM4Q12498 284 aa8.74□□□□□ -1.01
SHM2YLR058C YCL048W-AQ2V2Q2 79 aa8.74□□□□□ -1.01
SHM2YLR058C TFB5Q3E7C1 72 aaPredicted RBP8.74□□□□□ -1.01
SHM2YLR058C TPI1P00942 248 aaKnown RBP8.73□□□□□ -1.01
SHM2YLR058C QCR2P07257 368 aa8.73□□□□□ -1.01
SHM2YLR058C NCA3P46955 337 aa8.73□□□□□ -1.01
SHM2YLR058C DPB4Q04603 196 aaKnown RBP8.73□□□□□ -1.01
SHM2YLR058C RIM9Q04734 239 aa8.73□□□□□ -1.01
SHM2YLR058C YDL086WQ07505 273 aa8.73□□□□□ -1.01
SHM2YLR058C ALG6Q12001 544 aaKnown RBP8.73□□□□□ -1.01
SHM2YLR058C HUG1Q6Q5K6 68 aa8.73□□□□□ -1.01
SHM2YLR058C ACB1P31787 87 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms