RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W RMR1P53060 241 aa2.86□□□□□ -1.95
CTK1YKL139W GTR2P53290 341 aa2.86□□□□□ -1.95
CTK1YKL139W RSM10Q03201 203 aa2.86□□□□□ -1.95
CTK1YKL139W NIP7Q08962 181 aaKnown RBP2.86□□□□□ -1.95
CTK1YKL139W AGA2P32781 87 aa2.85□□□□□ -1.95
CTK1YKL139W YPT52P36018 234 aaKnown RBP2.85□□□□□ -1.95
CTK1YKL139W COS8P38723 381 aa2.85□□□□□ -1.95
CTK1YKL139W RPA43P46669 326 aa2.85□□□□□ -1.95
CTK1YKL139W BUD13P46947 266 aaPredicted RBP2.85□□□□□ -1.95
CTK1YKL139W MMS2P53152 137 aa2.85□□□□□ -1.95
CTK1YKL139W DIA1P54005 336 aa2.85□□□□□ -1.95
CTK1YKL139W YMR279CQ03263 540 aa2.85□□□□□ -1.95
CTK1YKL139W GRH1Q04410 372 aaKnown RBP2.85□□□□□ -1.95
CTK1YKL139W IES4Q08561 116 aa2.85□□□□□ -1.95
CTK1YKL139W QCR6P00127 147 aa2.84□□□□□ -1.95
CTK1YKL139W RPF1P38805 295 aaKnown RBP2.84□□□□□ -1.95
CTK1YKL139W ABF2Q02486 183 aa2.84□□□□□ -1.95
CTK1YKL139W PET191Q02772 108 aa2.84□□□□□ -1.95
CTK1YKL139W YML108WQ03759 105 aa2.84□□□□□ -1.95
CTK1YKL139W YOR268CQ08734 132 aa2.84□□□□□ -1.95
CTK1YKL139W GRE1Q08969 168 aa2.84□□□□□ -1.95
CTK1YKL139W LSO2Q3E772 92 aaKnown RBP2.84□□□□□ -1.95
CTK1YKL139W YOR020W-AQ3E824 90 aa2.84□□□□□ -1.95
CTK1YKL139W FCY2P17064 533 aa2.83□□□□□ -1.96
CTK1YKL139W RME1P32338 300 aaKnown RBP2.83□□□□□ -1.96
CTK1YKL139W MRPL28P36527 147 aa2.83□□□□□ -1.96
CTK1YKL139W DOG2P38773 246 aa2.83□□□□□ -1.96
CTK1YKL139W DOG1P38774 246 aa2.83□□□□□ -1.96
CTK1YKL139W SEC72P39742 193 aaKnown RBP2.83□□□□□ -1.96
CTK1YKL139W OST2P46964 130 aa2.83□□□□□ -1.96
CTK1YKL139W PIR5P46999 287 aa2.83□□□□□ -1.96
CTK1YKL139W PRM8P53174 237 aa2.83□□□□□ -1.96
CTK1YKL139W YMD8Q03697 442 aa2.83□□□□□ -1.96
CTK1YKL139W YDR114CQ04597 100 aa2.83□□□□□ -1.96
CTK1YKL139W YDL012CQ12489 107 aa2.83□□□□□ -1.96
CTK1YKL139W EGD2P38879 174 aaKnown RBP2.83□□□□□ -1.96
CTK1YKL139W YER084WP40057 128 aa2.83□□□□□ -1.96
CTK1YKL139W FIS1P40515 155 aa2.83□□□□□ -1.96
CTK1YKL139W YPR195CQ06594 109 aa2.83□□□□□ -1.96
CTK1YKL139W SEC4P07560 215 aaKnown RBP2.82□□□□□ -1.96
CTK1YKL139W FMT1P32785 401 aa2.82□□□□□ -1.96
CTK1YKL139W YBR063CP38083 404 aa2.82□□□□□ -1.96
CTK1YKL139W YAR068WP39564 161 aa2.82□□□□□ -1.96
CTK1YKL139W YJL016WP47072 561 aa2.82□□□□□ -1.96
CTK1YKL139W DID2P69771 204 aa2.82□□□□□ -1.96
CTK1YKL139W ATG39Q06159 398 aa2.82□□□□□ -1.96
CTK1YKL139W YNG1Q08465 219 aa2.82□□□□□ -1.96
CTK1YKL139W YHR214C-EQ8TGK0 99 aa2.82□□□□□ -1.96
CTK1YKL139W YPR170W-BP0C5R9 85 aa2.81□□□□□ -1.96
CTK1YKL139W TCA17P32613 152 aa2.81□□□□□ -1.96
CTK1YKL139W ECM33P38248 429 aaKnown RBP2.81□□□□□ -1.96
CTK1YKL139W YHR125WP38831 101 aa2.81□□□□□ -1.96
CTK1YKL139W IRC22P40006 225 aa2.81□□□□□ -1.96
CTK1YKL139W COG3P40094 801 aa2.81□□□□□ -1.96
CTK1YKL139W ERG10P41338 398 aaKnown RBP2.81□□□□□ -1.96
CTK1YKL139W YJR056CP47115 236 aa2.81□□□□□ -1.96
CTK1YKL139W KSS1P14681 368 aa2.8□□□□□ -1.96
CTK1YKL139W ECM4P36156 370 aa2.8□□□□□ -1.96
CTK1YKL139W ARC15P40518 154 aaRIP-Chip data2.8□□□□□ -1.96not detected
CTK1YKL139W LPP1Q04396 274 aa2.8□□□□□ -1.96
CTK1YKL139W FEX1Q08913 375 aa2.8□□□□□ -1.96
CTK1YKL139W FEX2Q08991 375 aa2.8□□□□□ -1.96
CTK1YKL139W USB1Q12208 290 aaKnown RBP2.8□□□□□ -1.96
CTK1YKL139W TDA8Q6B2U8 126 aa2.8□□□□□ -1.96
CTK1YKL139W PTM1P32857 523 aa2.79□□□□□ -1.96
CTK1YKL139W AIM25P47140 327 aa2.79□□□□□ -1.96
CTK1YKL139W YJR141WP47172 347 aaPredicted RBP2.79□□□□□ -1.96
CTK1YKL139W LSM7P53905 115 aaKnown RBP2.79□□□□□ -1.96
CTK1YKL139W GIM5Q04493 163 aa2.79□□□□□ -1.96
CTK1YKL139W YOL160WQ08321 113 aa2.79□□□□□ -1.96
CTK1YKL139W MDM32Q12171 622 aa2.79□□□□□ -1.96
CTK1YKL139W SAS5Q99314 248 aa2.79□□□□□ -1.96
CTK1YKL139W Q0255P03881 472 aa2.78□□□□□ -1.96
CTK1YKL139W ADH3P07246 375 aaKnown RBP2.78□□□□□ -1.96
CTK1YKL139W YHR032W-AP0C5N6 59 aa2.78□□□□□ -1.96
CTK1YKL139W KRE1P17260 313 aa2.78□□□□□ -1.96
CTK1YKL139W SNF6P18888 332 aa2.78□□□□□ -1.96
CTK1YKL139W RMD6P39975 231 aa2.78□□□□□ -1.96
CTK1YKL139W SSU72P53538 206 aaPredicted RBP2.78□□□□□ -1.96
CTK1YKL139W GAS3Q03655 524 aa2.78□□□□□ -1.96
CTK1YKL139W PEX12Q04370 399 aa2.78□□□□□ -1.96
CTK1YKL139W CMC2Q3E7A4 109 aa2.78□□□□□ -1.96
CTK1YKL139W CCH1P50077 2039 aa2.78□□□□□ -1.96
CTK1YKL139W RPL25P04456 142 aaKnown RBP2.78□□□□□ -1.96
CTK1YKL139W CDC7P06243 507 aa2.78□□□□□ -1.96
CTK1YKL139W MRS1P07266 363 aa2.78□□□□□ -1.96
CTK1YKL139W YKR032WP36127 104 aa2.78□□□□□ -1.96
CTK1YKL139W CAF4P36130 643 aa2.78□□□□□ -1.96
CTK1YKL139W YER188WP40103 239 aa2.78□□□□□ -1.96
CTK1YKL139W POG1P40473 351 aa2.78□□□□□ -1.96
CTK1YKL139W YGR050CP53231 118 aa2.78□□□□□ -1.96
CTK1YKL139W CAB4P53332 305 aa2.78□□□□□ -1.96
CTK1YKL139W SMD2Q06217 110 aaKnown RBP2.78□□□□□ -1.96
CTK1YKL139W FBA1P14540 359 aaKnown RBP2.77□□□□□ -1.97
CTK1YKL139W ATG22P25568 528 aa2.77□□□□□ -1.97
CTK1YKL139W ARC19P33204 171 aaKnown RBP2.77□□□□□ -1.97
CTK1YKL139W TIF34P40217 347 aaKnown RBP2.77□□□□□ -1.97
CTK1YKL139W YNL010WP53981 241 aaKnown RBP2.77□□□□□ -1.97
CTK1YKL139W SNO1Q03144 224 aa2.77□□□□□ -1.97
CTK1YKL139W RPL35AP0CX84 120 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms