RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	RPL39	P04650	51 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	RPL6B	P05739	176 aa	Known RBP	4.64	□□□□□ -1.67
SHE10	YGL228W	PUT1	P09368	476 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	RPS23A	P0CX29	145 aa	Known RBP	4.64	□□□□□ -1.67
SHE10	YGL228W	RPS23B	P0CX30	145 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	STF2	P16965	84 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	DAL80	P26343	269 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	SWD2	P36104	329 aa	Predicted RBP	4.64	□□□□□ -1.67
SHE10	YGL228W	GON7	P46984	123 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	MRX5	P47007	382 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	PRM15	Q03262	622 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	YOL118C	Q08259	102 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	FRE8	Q12209	686 aa		4.64	□□□□□ -1.67
SHE10	YGL228W	TPI1	P00942	248 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	RPL43A	P0CX25	92 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	RPL43B	P0CX26	92 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	MIR1	P23641	311 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	RPB7	P34087	171 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YOX1	P34161	385 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SHM2	P37291	469 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	PRS2	P38620	318 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	COS8	P38723	381 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	ECM14	P38836	430 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SHE10	YGL228W	RMD6	P39975	231 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	CCS1	P40202	249 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	HNT2	P49775	206 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	NIF3	P53081	288 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	CAB5	Q03941	241 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	PLP1	Q04004	230 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	CAC2	Q04199	468 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	RTT103	Q05543	409 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	GRC3	Q07845	632 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	FCY22	Q12119	530 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	MED4	Q12343	284 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YGL194C-A	Q2V2P6	80 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	GAL1	P04385	528 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SPS4	P09937	338 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YCR101C	P25607	182 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	TRR1	P29509	319 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	ACB1	P31787	87 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SPC29	P33419	253 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YKL187C	P34231	750 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	PRS3	P38689	320 aa	Known RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	LNP1	P38878	278 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SLX9	P53251	210 aa	Predicted RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	SMX3	P54999	86 aa	Predicted RBP	4.63	□□□□□ -1.67
SHE10	YGL228W	THI74	Q04083	370 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	TSA2	Q04120	196 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YMR254C	Q04838	102 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YLR224W	Q05947	369 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SCP1	Q08873	200 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YLR365W	Q7LIF2	110 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	YBR298C-A	Q8TGK4	73 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	ATG40	Q99325	256 aa		4.63	□□□□□ -1.67
SHE10	YGL228W	SUA5	P32579	426 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	YKL107W	P34251	309 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	CTR2	P38865	189 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	GAT2	P40209	560 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	QRI1	P43123	477 aa	Known RBP	4.62	□□□□□ -1.67
SHE10	YGL228W	SOL1	P50278	321 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	PEF1	P53238	335 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	MRPL50	P53724	139 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	YDR286C	Q05530	114 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	YOR029W	Q12243	111 aa		4.62	□□□□□ -1.67
SHE10	YGL228W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.62	□□□□□ -1.67
SHE10	YGL228W	CKA1	P15790	372 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	VMA3	P25515	160 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	YCR061W	P25639	631 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	TIP1	P27654	210 aa	Predicted RBP	4.61	□□□□□ -1.67
SHE10	YGL228W	MNS1	P32906	549 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	GEP4	P38812	185 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	SLM1	P40485	686 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	BNA2	P47125	453 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	FIT1	Q04433	528 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	UPS1	Q05776	175 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	YJR112W-A	Q3E743	109 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	YPR108W-A	Q3E7B3	70 aa		4.61	□□□□□ -1.67
SHE10	YGL228W	YML003W	P0CF16	290 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	SEC22	P22214	214 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	MRS4	P23500	304 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	POP2	P39008	433 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	PAC2	P39937	518 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	YIR035C	P40579	254 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	GLR1	P41921	483 aa	Known RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	YJR111C	P47148	283 aa	Known RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	MRPL22	P53881	309 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	YPL067C	Q02754	198 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	YDL086W	Q07505	273 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	SNA4	Q07549	140 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	TMC1	Q08422	150 aa	Predicted RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	YNG1	Q08465	219 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	ALG6	Q12001	544 aa	Known RBP	4.6	□□□□□ -1.67
SHE10	YGL228W	SWT1	Q12104	458 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	VAM3	Q12241	283 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	TFC7	Q12415	435 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	WHI5	Q12416	295 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	HUG1	Q6Q5K6	68 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	QCR2	P07257	368 aa		4.6	□□□□□ -1.67
SHE10	YGL228W	ERG2	P32352	222 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms