RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W YBR197CP38306 217 aa6.66□□□□□ -1.34
SHC1YER096W ARO9P38840 513 aaPredicted RBP6.66□□□□□ -1.34
SHC1YER096W GNA1P43577 159 aaPredicted RBP6.66□□□□□ -1.34
SHC1YER096W YJR011CP47086 261 aaPredicted RBP6.66□□□□□ -1.34
SHC1YER096W NIF3P53081 288 aa6.66□□□□□ -1.34
SHC1YER096W ACS1Q01574 713 aa6.66□□□□□ -1.34
SHC1YER096W YDC1Q02896 317 aa6.66□□□□□ -1.34
SHC1YER096W YLR224WQ05947 369 aa6.66□□□□□ -1.34
SHC1YER096W YOR192C-CQ3E736 78 aa6.66□□□□□ -1.34
SHC1YER096W UBA3Q99344 299 aa6.66□□□□□ -1.34
SHC1YER096W TPI1P00942 248 aaKnown RBP6.65□□□□□ -1.35
SHC1YER096W ACB1P31787 87 aa6.65□□□□□ -1.35
SHC1YER096W SWD3P38123 315 aa6.65□□□□□ -1.35
SHC1YER096W YBR220CP38318 560 aa6.65□□□□□ -1.35
SHC1YER096W YGP1P38616 354 aaKnown RBP6.65□□□□□ -1.35
SHC1YER096W GEP4P38812 185 aa6.65□□□□□ -1.35
SHC1YER096W SKO1Q02100 647 aa6.65□□□□□ -1.35
SHC1YER096W PLP1Q04004 230 aa6.65□□□□□ -1.35
SHC1YER096W PIN3Q06449 215 aa6.65□□□□□ -1.35
SHC1YER096W RPL25P04456 142 aaKnown RBP6.64□□□□□ -1.35
SHC1YER096W RPL6BP05739 176 aaKnown RBP6.64□□□□□ -1.35
SHC1YER096W SSA3P09435 649 aaKnown RBP6.64□□□□□ -1.35
SHC1YER096W SPS100P13130 326 aa6.64□□□□□ -1.35
SHC1YER096W CDC34P14682 295 aa6.64□□□□□ -1.35
SHC1YER096W MIR1P23641 311 aaKnown RBP6.64□□□□□ -1.35
SHC1YER096W SUA5P32579 426 aa6.64□□□□□ -1.35
SHC1YER096W BFR1P38934 470 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
SHC1YER096W CRZ1P53968 678 aa6.64□□□□□ -1.35
SHC1YER096W SMX3P54999 86 aaPredicted RBP6.64□□□□□ -1.35
SHC1YER096W SED1Q01589 338 aa6.64□□□□□ -1.35
SHC1YER096W FRE8Q12209 686 aa6.64□□□□□ -1.35
SHC1YER096W GAL1P04385 528 aa6.63□□□□□ -1.35
SHC1YER096W SEC22P22214 214 aa6.63□□□□□ -1.35
SHC1YER096W MRS4P23500 304 aa6.63□□□□□ -1.35
SHC1YER096W YCR061WP25639 631 aa6.63□□□□□ -1.35
SHC1YER096W RPB7P34087 171 aa6.63□□□□□ -1.35
SHC1YER096W YOX1P34161 385 aa6.63□□□□□ -1.35
SHC1YER096W MRX5P47007 382 aa6.63□□□□□ -1.35
SHC1YER096W TAF4P50105 388 aa6.63□□□□□ -1.35
SHC1YER096W MRPL50P53724 139 aa6.63□□□□□ -1.35
SHC1YER096W GIM3P53900 129 aa6.63□□□□□ -1.35
SHC1YER096W ISU1Q03020 165 aa6.63□□□□□ -1.35
SHC1YER096W CAB5Q03941 241 aa6.63□□□□□ -1.35
SHC1YER096W THI74Q04083 370 aa6.63□□□□□ -1.35
SHC1YER096W RTT103Q05543 409 aa6.63□□□□□ -1.35
SHC1YER096W SCP1Q08873 200 aa6.63□□□□□ -1.35
SHC1YER096W YLR108CQ12259 485 aa6.63□□□□□ -1.35
SHC1YER096W MTR2P34232 184 aaKnown RBP6.62□□□□□ -1.35
SHC1YER096W COS8P38723 381 aa6.62□□□□□ -1.35
SHC1YER096W RMD6P39975 231 aa6.62□□□□□ -1.35
SHC1YER096W CCS1P40202 249 aaKnown RBP6.62□□□□□ -1.35
SHC1YER096W GON7P46984 123 aa6.62□□□□□ -1.35
SHC1YER096W HNT2P49775 206 aa6.62□□□□□ -1.35
SHC1YER096W TSA2Q04120 196 aa6.62□□□□□ -1.35
SHC1YER096W YDL086WQ07505 273 aa6.62□□□□□ -1.35
SHC1YER096W GRC3Q07845 632 aa6.62□□□□□ -1.35
SHC1YER096W YNG1Q08465 219 aa6.62□□□□□ -1.35
SHC1YER096W MED4Q12343 284 aa6.62□□□□□ -1.35
SHC1YER096W YJR112W-AQ3E743 109 aa6.62□□□□□ -1.35
SHC1YER096W RPL39P04650 51 aa6.61□□□□□ -1.35
SHC1YER096W VMA3P25515 160 aa6.61□□□□□ -1.35
SHC1YER096W DAL80P26343 269 aa6.61□□□□□ -1.35
SHC1YER096W TIP1P27654 210 aaPredicted RBP6.61□□□□□ -1.35
SHC1YER096W RPS0AP32905 252 aaKnown RBP6.61□□□□□ -1.35
SHC1YER096W SHM2P37291 469 aaKnown RBP6.61□□□□□ -1.35
SHC1YER096W NAT2P37293 288 aa6.61□□□□□ -1.35
SHC1YER096W PRS2P38620 318 aaKnown RBP6.61□□□□□ -1.35
SHC1YER096W YNL092WP53934 400 aa6.61□□□□□ -1.35
SHC1YER096W CAC2Q04199 468 aa6.61□□□□□ -1.35
SHC1YER096W YDR286CQ05530 114 aa6.61□□□□□ -1.35
SHC1YER096W ALG6Q12001 544 aaKnown RBP6.61□□□□□ -1.35
SHC1YER096W TFC7Q12415 435 aa6.61□□□□□ -1.35
SHC1YER096W YLR365WQ7LIF2 110 aa6.61□□□□□ -1.35
SHC1YER096W RPS23AP0CX29 145 aaKnown RBP6.6□□□□□ -1.35
SHC1YER096W RPS23BP0CX30 145 aa6.6□□□□□ -1.35
SHC1YER096W ISC10P32645 267 aa6.6□□□□□ -1.35
SHC1YER096W MNS1P32906 549 aa6.6□□□□□ -1.35
SHC1YER096W LNP1P38878 278 aa6.6□□□□□ -1.35
SHC1YER096W AIM46P38885 310 aa6.6□□□□□ -1.35
SHC1YER096W PHM8P40025 321 aa6.6□□□□□ -1.35
SHC1YER096W YJR111CP47148 283 aaKnown RBP6.6□□□□□ -1.35
SHC1YER096W PRM15Q03262 622 aa6.6□□□□□ -1.35
SHC1YER096W ORM2Q06144 216 aa6.6□□□□□ -1.35
SHC1YER096W YOR029WQ12243 111 aa6.6□□□□□ -1.35
SHC1YER096W FMP16Q12497 93 aa6.6□□□□□ -1.35
SHC1YER096W YCR101CP25607 182 aa6.6□□□□□ -1.35
SHC1YER096W SRY1P36007 326 aa6.6□□□□□ -1.35
SHC1YER096W ECM14P38836 430 aa6.6□□□□□ -1.35
SHC1YER096W POP2P39008 433 aa6.6□□□□□ -1.35
SHC1YER096W YMR144WP40214 342 aaKnown RBP6.6□□□□□ -1.35
SHC1YER096W YIR035CP40579 254 aa6.6□□□□□ -1.35
SHC1YER096W SOL1P50278 321 aa6.6□□□□□ -1.35
SHC1YER096W PEF1P53238 335 aa6.6□□□□□ -1.35
SHC1YER096W SLX9P53251 210 aaPredicted RBP6.6□□□□□ -1.35
SHC1YER096W MRPL22P53881 309 aa6.6□□□□□ -1.35
SHC1YER096W YDR415CQ04033 374 aaPredicted RBP6.6□□□□□ -1.35
SHC1YER096W YMR254CQ04838 102 aa6.6□□□□□ -1.35
SHC1YER096W FCY22Q12119 530 aa6.6□□□□□ -1.35
SHC1YER096W YPR108W-AQ3E7B3 70 aa6.6□□□□□ -1.35
SHC1YER096W TFB5Q3E7C1 72 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 157.8 ms