RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B MSA2P36157 363 aa0.3□□□□□ -2.36
SBH1YER087C-B MRPL28P36527 147 aa0.3□□□□□ -2.36
SBH1YER087C-B PHO88P38264 188 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B UMP1P38293 148 aa0.3□□□□□ -2.36
SBH1YER087C-B YBR209WP38311 105 aa0.3□□□□□ -2.36
SBH1YER087C-B YBR220CP38318 560 aa0.3□□□□□ -2.36
SBH1YER087C-B URA8P38627 578 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B YHR022CP38763 256 aa0.3□□□□□ -2.36
SBH1YER087C-B DSE2P38844 325 aa0.3□□□□□ -2.36
SBH1YER087C-B YHR180WP38868 163 aa0.3□□□□□ -2.36
SBH1YER087C-B IRC22P40006 225 aa0.3□□□□□ -2.36
SBH1YER087C-B PEX17P40155 199 aa0.3□□□□□ -2.36
SBH1YER087C-B YMR144WP40214 342 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B PEP8P40335 379 aa0.3□□□□□ -2.36
SBH1YER087C-B YIL001WP40560 513 aa0.3□□□□□ -2.36
SBH1YER087C-B CAT5P41735 233 aa0.3□□□□□ -2.36
SBH1YER087C-B PRM10P42946 383 aa0.3□□□□□ -2.36
SBH1YER087C-B CIS3P47001 227 aa0.3□□□□□ -2.36
SBH1YER087C-B YJL027CP47063 138 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B LIA1P47120 325 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B BRR6P53062 197 aa0.3□□□□□ -2.36
SBH1YER087C-B DOC1P53068 250 aa0.3□□□□□ -2.36
SBH1YER087C-B NSA1P53136 463 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B CUS2P53830 285 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B NOP13P53883 403 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
SBH1YER087C-B YNL134CP53912 376 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B MZM1Q03429 123 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B MRPS8Q03799 155 aa0.3□□□□□ -2.36
SBH1YER087C-B YML096WQ04489 525 aa0.3□□□□□ -2.36
SBH1YER087C-B SSQ1Q05931 657 aaPredicted RBP0.3□□□□□ -2.36
SBH1YER087C-B NEJ1Q06148 342 aa0.3□□□□□ -2.36
SBH1YER087C-B ATG39Q06159 398 aa0.3□□□□□ -2.36
SBH1YER087C-B FSF1Q12029 327 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B RUD3Q12234 484 aaKnown RBP0.3□□□□□ -2.36
SBH1YER087C-B YOL107WQ12239 342 aa0.3□□□□□ -2.36
SBH1YER087C-B ATO3Q12359 275 aa0.3□□□□□ -2.36
SBH1YER087C-B SIR4P11978 1358 aa0.3□□□□□ -2.36
SBH1YER087C-B THP2O13539 261 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B SEC4P07560 215 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B YBR121C-AP0C5L4 52 aa0.29□□□□□ -2.36
SBH1YER087C-B YHR032W-AP0C5N6 59 aa0.29□□□□□ -2.36
SBH1YER087C-B YOL162WP0CF19 215 aa0.29□□□□□ -2.36
SBH1YER087C-B URA6P15700 204 aa0.29□□□□□ -2.36
SBH1YER087C-B DBF2P22204 572 aa0.29□□□□□ -2.36
SBH1YER087C-B CDC10P25342 322 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B PBN1P25580 416 aa0.29□□□□□ -2.36
SBH1YER087C-B YCR016WP25617 290 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B IDH1P28834 360 aaKnown RBP RIP-Chip data0.29□□□□□ -2.36not detected
SBH1YER087C-B VMA6P32366 345 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B TFC1P32367 649 aa0.29□□□□□ -2.36
SBH1YER087C-B SEC17P32602 292 aa0.29□□□□□ -2.36
SBH1YER087C-B TCA17P32613 152 aa0.29□□□□□ -2.36
SBH1YER087C-B SNC2P33328 115 aa0.29□□□□□ -2.36
SBH1YER087C-B PRX1P34227 261 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B TMA19P35691 167 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B YET1P35723 206 aa0.29□□□□□ -2.36
SBH1YER087C-B RIB1P38066 345 aa0.29□□□□□ -2.36
SBH1YER087C-B LDB7P38210 180 aa0.29□□□□□ -2.36
SBH1YER087C-B POP4P38336 279 aa0.29□□□□□ -2.36
SBH1YER087C-B DOG2P38773 246 aa0.29□□□□□ -2.36
SBH1YER087C-B GAA1P39012 614 aa0.29□□□□□ -2.36
SBH1YER087C-B YAR068WP39564 161 aa0.29□□□□□ -2.36
SBH1YER087C-B YNL217WP40152 326 aa0.29□□□□□ -2.36
SBH1YER087C-B RPL13BP40212 199 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B PGD1P40356 397 aa0.29□□□□□ -2.36
SBH1YER087C-B BMT5P40493 336 aa0.29□□□□□ -2.36
SBH1YER087C-B YRB2P40517 327 aa0.29□□□□□ -2.36
SBH1YER087C-B RPL33BP41056 107 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B YRB1P41920 201 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B OTU1P43558 301 aa0.29□□□□□ -2.36
SBH1YER087C-B BNA6P43619 295 aa0.29□□□□□ -2.36
SBH1YER087C-B NUP57P48837 541 aa0.29□□□□□ -2.36
SBH1YER087C-B PRM8P53174 237 aa0.29□□□□□ -2.36
SBH1YER087C-B ERV29P53337 310 aa0.29□□□□□ -2.36
SBH1YER087C-B POP3P53833 195 aaPredicted RBP0.29□□□□□ -2.36
SBH1YER087C-B PDR17P53844 350 aa0.29□□□□□ -2.36
SBH1YER087C-B RHO3Q00245 231 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B CYT2Q00873 224 aa0.29□□□□□ -2.36
SBH1YER087C-B PET117Q02771 107 aa0.29□□□□□ -2.36
SBH1YER087C-B SWP1Q02795 286 aa0.29□□□□□ -2.36
SBH1YER087C-B YMD8Q03697 442 aa0.29□□□□□ -2.36
SBH1YER087C-B LPP1Q04396 274 aa0.29□□□□□ -2.36
SBH1YER087C-B SML1Q04964 104 aa0.29□□□□□ -2.36
SBH1YER087C-B CDC123Q05791 360 aa0.29□□□□□ -2.36
SBH1YER087C-B ANT1Q06497 328 aa0.29□□□□□ -2.36
SBH1YER087C-B RRP40Q08285 240 aaKnown RBP0.29□□□□□ -2.36
SBH1YER087C-B YNG1Q08465 219 aa0.29□□□□□ -2.36
SBH1YER087C-B MSA1Q08471 629 aa0.29□□□□□ -2.36
SBH1YER087C-B GPM2Q12008 311 aa0.29□□□□□ -2.36
SBH1YER087C-B YLR126CQ12288 251 aa0.29□□□□□ -2.36
SBH1YER087C-B BBP1Q12365 385 aa0.29□□□□□ -2.36
SBH1YER087C-B RPL13AQ12690 199 aaPredicted RBP0.29□□□□□ -2.36
SBH1YER087C-B YHR086W-AQ3E746 53 aa0.29□□□□□ -2.36
SBH1YER087C-B SEY1Q99287 776 aa0.29□□□□□ -2.36
SBH1YER087C-B TIM9O74700 87 aa0.28□□□□□ -2.36
SBH1YER087C-B CDC28P00546 298 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B RPL25P04456 142 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B SIR2P06700 562 aa0.28□□□□□ -2.36
SBH1YER087C-B CPA1P07258 411 aaKnown RBP0.28□□□□□ -2.36
SBH1YER087C-B RPL27BP0C2H7 136 aaKnown RBP0.28□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms