RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	GPG1	P53130	126 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	RSM27	P53305	110 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	SED1	Q01589	338 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	MRPS16	Q02608	121 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	TY1A-DR2	Q03964	440 aa	Known RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	YMR254C	Q04838	102 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	YTH1	Q06102	208 aa	Predicted RBP	5.5	□□□□□ -1.53
VMA3	YEL027W	GAT3	Q07928	141 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	YOR186W	Q08560	144 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	ENV7	Q12003	364 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	EAF3	Q12432	401 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	RDI1	Q12434	202 aa		5.5	□□□□□ -1.53
VMA3	YEL027W	AAC1	P04710	309 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	YOX1	P34161	385 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	FLO10	P36170	1169 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	YHL044W	P38727	235 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	MID1	P41821	548 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	TAF4	P50105	388 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	YMR279C	Q03263	540 aa		5.49	□□□□□ -1.53
VMA3	YEL027W	REP2	P03872	296 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	RAD52	P06778	471 aa	Known RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	YML003W	P0CF16	290 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	CPR4	P25334	318 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	PRS2	P38620	318 aa	Known RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	CCS1	P40202	249 aa	Known RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	MRX5	P47007	382 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	SBH2	P52871	88 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	GTF1	P53260	183 aa	Predicted RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	MOT3	P54785	490 aa	Known RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	ARG5,6	Q01217	863 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	YPL067C	Q02754	198 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	YML018C	Q03730	393 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	GRC3	Q07845	632 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	FCY22	Q12119	530 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	MPD1	Q12404	318 aa	Known RBP	5.48	□□□□□ -1.53
VMA3	YEL027W	PET20	Q99373	253 aa		5.48	□□□□□ -1.53
VMA3	YEL027W	IMP1	P28627	190 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	ERG3	P32353	365 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	MNS1	P32906	549 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	SHM2	P37291	469 aa	Known RBP	5.47	□□□□□ -1.53
VMA3	YEL027W	YBR197C	P38306	217 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	OSH7	P38755	437 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	YER121W	P40076	114 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	YJR011C	P47086	261 aa	Predicted RBP	5.47	□□□□□ -1.53
VMA3	YEL027W	ALG9	P53868	555 aa	Known RBP	5.47	□□□□□ -1.53
VMA3	YEL027W	YNL046W	P53956	172 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	PRM15	Q03262	622 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	UPS1	Q05776	175 aa		5.47	□□□□□ -1.53
VMA3	YEL027W	VMA3	P25515	160 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	OCH1	P31755	480 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	AGA2	P32781	87 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	FMT1	P32785	401 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	PAN3	P36102	679 aa	Predicted RBP	5.46	□□□□□ -1.54
VMA3	YEL027W	ECM31	P38122	312 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	SDH8	P38345	138 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	RMD6	P39975	231 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	HNT2	P49775	206 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	SMX3	P54999	86 aa	Predicted RBP	5.46	□□□□□ -1.54
VMA3	YEL027W	GMC1	Q04399	608 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	LIP2	Q06005	328 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	SYM1	Q06563	197 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	FEX1	Q08913	375 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	YLR108C	Q12259	485 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	ATP14	Q12349	124 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	TRM13	Q12383	476 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	LSO2	Q3E772	92 aa	Known RBP	5.46	□□□□□ -1.54
VMA3	YEL027W	ATG40	Q99325	256 aa		5.46	□□□□□ -1.54
VMA3	YEL027W	GAL1	P04385	528 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	FUS3	P16892	353 aa	Known RBP	5.45	□□□□□ -1.54
VMA3	YEL027W	SWD3	P38123	315 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	FIG1	P38224	298 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	NTC20	P38302	140 aa	Predicted RBP	5.45	□□□□□ -1.54
VMA3	YEL027W	YIR020C	P40575	100 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	NCA3	P46955	337 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	GON7	P46984	123 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	SOL1	P50278	321 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	SLX9	P53251	210 aa	Predicted RBP	5.45	□□□□□ -1.54
VMA3	YEL027W	VBA1	Q04301	562 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	DXO1	Q06349	442 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	SCP1	Q08873	200 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	FEX2	Q08991	375 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	FRE8	Q12209	686 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	YLR365W	Q7LIF2	110 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	YHR213W-A	Q8TGT4	77 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	UBA3	Q99344	299 aa		5.45	□□□□□ -1.54
VMA3	YEL027W	URA2	P07259	2214 aa	Known RBP	5.45	□□□□□ -1.54
VMA3	YEL027W	RPL39	P04650	51 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	ARG80	P07249	177 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	YLL053C	P0CD98	152 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	MRP2	P10663	115 aa	Predicted RBP	5.44	□□□□□ -1.54
VMA3	YEL027W	CKA1	P15790	372 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	MRPL33	P20084	86 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	MRP17	P28778	131 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	TRR1	P29509	319 aa	Known RBP	5.44	□□□□□ -1.54
VMA3	YEL027W	RPB7	P34087	171 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	EDS1	P38073	919 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	SLM1	P40485	686 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	BMT5	P40493	336 aa		5.44	□□□□□ -1.54
VMA3	YEL027W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
VMA3	YEL027W	GLR1	P41921	483 aa	Known RBP	5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms