RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	POP8	P38208	133 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	RRF1	P38771	230 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	PET100	P38958	111 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	RMD6	P39975	231 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	GON7	P46984	123 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	HNT2	P49775	206 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	ALG9	P53868	555 aa	Known RBP	6.16	□□□□□ -1.42
SKP1	YDR328C	UPS1	Q05776	175 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	FRE8	Q12209	686 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	WHI5	Q12416	295 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	YLR365W	Q7LIF2	110 aa		6.16	□□□□□ -1.42
SKP1	YDR328C	YML003W	P0CF16	290 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	SEN2	P16658	377 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	MNS1	P32906	549 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	RPB7	P34087	171 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	YKL187C	P34231	750 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	ECM14	P38836	430 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	PRM5	P40476	318 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	NIF3	P53081	288 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	PEF1	P53238	335 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	YNL046W	P53956	172 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	YPL067C	Q02754	198 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	SCP1	Q08873	200 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	FCY22	Q12119	530 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	UBA3	Q99344	299 aa		6.15	□□□□□ -1.42
SKP1	YDR328C	FUS3	P16892	353 aa	Known RBP	6.14	□□□□□ -1.43
SKP1	YDR328C	CKS1	P20486	150 aa	Known RBP	6.14	□□□□□ -1.43
SKP1	YDR328C	YPC1	P38298	316 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	POP2	P39008	433 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	SOL1	P50278	321 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	SLX9	P53251	210 aa	Predicted RBP	6.14	□□□□□ -1.43
SKP1	YDR328C	PRM15	Q03262	622 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	YDR286C	Q05530	114 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	RTT103	Q05543	409 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	YDL086W	Q07505	273 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	PML1	Q07930	204 aa	Predicted RBP	6.14	□□□□□ -1.43
SKP1	YDR328C	YLR108C	Q12259	485 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	MED4	Q12343	284 aa		6.14	□□□□□ -1.43
SKP1	YDR328C	RPL39	P04650	51 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	CKA1	P15790	372 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	ACB1	P31787	87 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	SWD2	P36104	329 aa	Predicted RBP	6.13	□□□□□ -1.43
SKP1	YDR328C	NTC20	P38302	140 aa	Predicted RBP	6.13	□□□□□ -1.43
SKP1	YDR328C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.13	□□□□□ -1.43	not detected
SKP1	YDR328C	GAT2	P40209	560 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	GLR1	P41921	483 aa	Known RBP	6.13	□□□□□ -1.43
SKP1	YDR328C	MRPL22	P53881	309 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	CAB5	Q03941	241 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	THI74	Q04083	370 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	YDR114C	Q04597	100 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	YOR192C-C	Q3E736	78 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	YPR108W-A	Q3E7B3	70 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	ATG40	Q99325	256 aa		6.13	□□□□□ -1.43
SKP1	YDR328C	SUA5	P32579	426 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	SPC29	P33419	253 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	OSH7	P38755	437 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	BMT5	P40493	336 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	YGR210C	P42942	411 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	QRI1	P43123	477 aa	Known RBP	6.12	□□□□□ -1.43
SKP1	YDR328C	RPA34	P47006	233 aa	Predicted RBP	6.12	□□□□□ -1.43
SKP1	YDR328C	TEX1	P53851	422 aa	Known RBP	6.12	□□□□□ -1.43
SKP1	YDR328C	GMC1	Q04399	608 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	ASM4	Q05166	528 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	LIP2	Q06005	328 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	YOL118C	Q08259	102 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	VAM3	Q12241	283 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	PRM4	Q12498	284 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	YBL029C-A	Q3E756	94 aa		6.12	□□□□□ -1.43
SKP1	YDR328C	TPI1	P00942	248 aa	Known RBP	6.11	□□□□□ -1.43
SKP1	YDR328C	QCR2	P07257	368 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	YUH1	P35127	236 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	LAG1	P38703	411 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	AIM46	P38885	310 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	SLM1	P40485	686 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	XPT1	P47165	209 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	UBP8	P50102	471 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	MRPL50	P53724	139 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	CAC2	Q04199	468 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	FIT1	Q04433	528 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	YLR224W	Q05947	369 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	SNA4	Q07549	140 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	FEX2	Q08991	375 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	WSC3	Q12215	556 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	BPH1	P25356	2167 aa		6.11	□□□□□ -1.43
SKP1	YDR328C	VMA8	P32610	256 aa	Known RBP	6.1	□□□□□ -1.43
SKP1	YDR328C	CPR5	P35176	225 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	GLY1	P37303	387 aa	Known RBP	6.1	□□□□□ -1.43
SKP1	YDR328C	COS8	P38723	381 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	VMA22	P38784	181 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	YER137C	P40083	148 aa	Known RBP	6.1	□□□□□ -1.43
SKP1	YDR328C	BNA2	P47125	453 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	HSK3	P69852	69 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	ALG6	Q12001	544 aa	Known RBP	6.1	□□□□□ -1.43
SKP1	YDR328C	YOR029W	Q12243	111 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	TFB5	Q3E7C1	72 aa	Predicted RBP	6.1	□□□□□ -1.43
SKP1	YDR328C	YMR105W-A	Q8TGS8	64 aa		6.1	□□□□□ -1.43
SKP1	YDR328C	YCR061W	P25639	631 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	GEP4	P38812	185 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	CTR2	P38865	189 aa		6.09	□□□□□ -1.43
SKP1	YDR328C	PAC2	P39937	518 aa		6.09	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms