RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C YDR248CQ03786 193 aa5.07□□□□□ -1.6
MDH3YDL078C CUE4Q04201 117 aaPredicted RBP5.07□□□□□ -1.6
MDH3YDL078C YMR130WQ04223 302 aa5.07□□□□□ -1.6
MDH3YDL078C SNT309Q06091 175 aaPredicted RBP5.07□□□□□ -1.6
MDH3YDL078C PEX30Q06169 523 aa5.07□□□□□ -1.6
MDH3YDL078C RAF1Q06891 181 aa5.07□□□□□ -1.6
MDH3YDL078C HRD1Q08109 551 aa5.07□□□□□ -1.6
MDH3YDL078C YOR343CQ12484 108 aa5.07□□□□□ -1.6
MDH3YDL078C YOR304C-AO14468 76 aa5.06□□□□□ -1.6
MDH3YDL078C CYC1P00044 109 aaPredicted RBP5.06□□□□□ -1.6
MDH3YDL078C AAC1P04710 309 aa5.06□□□□□ -1.6
MDH3YDL078C RPL9AP05738 191 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C PRB1P09232 635 aa5.06□□□□□ -1.6
MDH3YDL078C YOL162WP0CF19 215 aa5.06□□□□□ -1.6
MDH3YDL078C COQ3P27680 312 aa5.06□□□□□ -1.6
MDH3YDL078C COS9P36034 407 aa5.06□□□□□ -1.6
MDH3YDL078C YKL075CP36083 450 aa5.06□□□□□ -1.6
MDH3YDL078C YKL071WP36086 256 aa5.06□□□□□ -1.6
MDH3YDL078C YBR220CP38318 560 aa5.06□□□□□ -1.6
MDH3YDL078C CTF8P38877 133 aa5.06□□□□□ -1.6
MDH3YDL078C FET3P38993 636 aa5.06□□□□□ -1.6
MDH3YDL078C PHO90P39535 881 aa5.06□□□□□ -1.6
MDH3YDL078C GDI1P39958 451 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C GAT2P40209 560 aa5.06□□□□□ -1.6
MDH3YDL078C MCM22P47167 239 aa5.06□□□□□ -1.6
MDH3YDL078C RPL9BP51401 191 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C MRPL19P53875 158 aa5.06□□□□□ -1.6
MDH3YDL078C YDR366CP87287 132 aa5.06□□□□□ -1.6
MDH3YDL078C ODC1Q03028 310 aa5.06□□□□□ -1.6
MDH3YDL078C YAP6Q03935 383 aa5.06□□□□□ -1.6
MDH3YDL078C ATC1Q04005 294 aa5.06□□□□□ -1.6
MDH3YDL078C MRPL1Q04599 285 aa5.06□□□□□ -1.6
MDH3YDL078C SNO4Q04902 237 aa5.06□□□□□ -1.6
MDH3YDL078C HSP33Q08914 237 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C NIP7Q08962 181 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C HSP32Q08992 237 aa5.06□□□□□ -1.6
MDH3YDL078C YDL180WQ12301 547 aa5.06□□□□□ -1.6
MDH3YDL078C PST2Q12335 198 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C FOL3Q12676 427 aaPredicted RBP5.06□□□□□ -1.6
MDH3YDL078C YPL119C-AQ3E751 87 aa5.06□□□□□ -1.6
MDH3YDL078C HBN1Q96VH4 193 aa5.06□□□□□ -1.6
MDH3YDL078C SEC16P48415 2195 aaKnown RBP5.06□□□□□ -1.6
MDH3YDL078C COX5BP00425 151 aa5.05□□□□□ -1.6
MDH3YDL078C HAP3P13434 144 aa5.05□□□□□ -1.6
MDH3YDL078C PDA1P16387 420 aaKnown RBP5.05□□□□□ -1.6
MDH3YDL078C SPO7P18410 259 aa5.05□□□□□ -1.6
MDH3YDL078C CKS1P20486 150 aaKnown RBP5.05□□□□□ -1.6
MDH3YDL078C YCL042WP25572 119 aa5.05□□□□□ -1.6
MDH3YDL078C SUA7P29055 345 aaPredicted RBP5.05□□□□□ -1.6
MDH3YDL078C MRPL6P32904 214 aa5.05□□□□□ -1.6
MDH3YDL078C ATG8P38182 117 aaRIP-Chip data5.05□□□□□ -1.6not detected
MDH3YDL078C YAR028WP39548 234 aa5.05□□□□□ -1.6
MDH3YDL078C SPO73P40031 143 aa5.05□□□□□ -1.6
MDH3YDL078C BUR6P40096 142 aa5.05□□□□□ -1.6
MDH3YDL078C GPP1P41277 250 aaKnown RBP5.05□□□□□ -1.6
MDH3YDL078C CHA4P43634 648 aa5.05□□□□□ -1.6
MDH3YDL078C SSY5P47002 699 aa5.05□□□□□ -1.6
MDH3YDL078C PRM8P53174 237 aa5.05□□□□□ -1.6
MDH3YDL078C CTF19Q02732 369 aa5.05□□□□□ -1.6
MDH3YDL078C GTO3Q04806 366 aa5.05□□□□□ -1.6
MDH3YDL078C YMR253CQ04835 414 aa5.05□□□□□ -1.6
MDH3YDL078C COQ11Q05892 277 aa5.05□□□□□ -1.6
MDH3YDL078C YLR179CQ06252 201 aaKnown RBP5.05□□□□□ -1.6
MDH3YDL078C YOR378WQ08902 515 aa5.05□□□□□ -1.6
MDH3YDL078C TFC7Q12415 435 aa5.05□□□□□ -1.6
MDH3YDL078C PRM4Q12498 284 aa5.05□□□□□ -1.6
MDH3YDL078C DPM1P14020 267 aaKnown RBP5.04□□□□□ -1.6
MDH3YDL078C TFS1P14306 219 aa5.04□□□□□ -1.6
MDH3YDL078C RPB8P20436 146 aa5.04□□□□□ -1.6
MDH3YDL078C GAS1P22146 559 aaKnown RBP5.04□□□□□ -1.6
MDH3YDL078C EXG1P23776 448 aaKnown RBP5.04□□□□□ -1.6
MDH3YDL078C BUD5P25300 642 aaPredicted RBP5.04□□□□□ -1.6
MDH3YDL078C PRE2P30656 287 aaKnown RBP5.04□□□□□ -1.6
MDH3YDL078C YPT53P36019 220 aa5.04□□□□□ -1.6
MDH3YDL078C YHL037CP38733 133 aa5.04□□□□□ -1.6
MDH3YDL078C RPP1P38786 293 aa5.04□□□□□ -1.6
MDH3YDL078C IRC7P43623 340 aa5.04□□□□□ -1.6
MDH3YDL078C YGL185CP53100 379 aa5.04□□□□□ -1.6
MDH3YDL078C ERV29P53337 310 aa5.04□□□□□ -1.6
MDH3YDL078C MSC3Q05812 728 aa5.04□□□□□ -1.6
MDH3YDL078C BER1Q06688 274 aaKnown RBP5.04□□□□□ -1.6
MDH3YDL078C SRL2Q12020 392 aa5.04□□□□□ -1.6
MDH3YDL078C YDL007C-AQ2V2Q0 85 aa5.04□□□□□ -1.6
MDH3YDL078C FSH3Q99369 266 aa5.04□□□□□ -1.6
MDH3YDL078C SGA1P08019 549 aa5.03□□□□□ -1.6
MDH3YDL078C BOS1P25385 244 aa5.03□□□□□ -1.6
MDH3YDL078C AFG1P32317 509 aa5.03□□□□□ -1.6
MDH3YDL078C SUA5P32579 426 aa5.03□□□□□ -1.6
MDH3YDL078C AIM3P38266 947 aaKnown RBP5.03□□□□□ -1.6
MDH3YDL078C YGP1P38616 354 aaKnown RBP5.03□□□□□ -1.6
MDH3YDL078C YHR035WP38769 630 aa5.03□□□□□ -1.6
MDH3YDL078C ATG18P43601 500 aa5.03□□□□□ -1.6
MDH3YDL078C DPB11P47027 764 aaPredicted RBP5.03□□□□□ -1.6
MDH3YDL078C YJR012CP47087 207 aa5.03□□□□□ -1.6
MDH3YDL078C PHB2P50085 310 aa5.03□□□□□ -1.6
MDH3YDL078C BRR6P53062 197 aa5.03□□□□□ -1.6
MDH3YDL078C NRK1P53915 240 aa5.03□□□□□ -1.6
MDH3YDL078C CTS2Q06350 511 aa5.03□□□□□ -1.6
MDH3YDL078C MRX9Q07349 420 aaKnown RBP5.03□□□□□ -1.6
MDH3YDL078C HRT1Q08273 121 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms