RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W BUR2Q05949 395 aa3.76□□□□□ -1.81
PTC1YDL006W YPR127WQ06494 345 aa3.76□□□□□ -1.81
PTC1YDL006W MCP1Q12106 302 aa3.76□□□□□ -1.81
PTC1YDL006W YOR032W-AQ8TGS1 66 aa3.76□□□□□ -1.81
PTC1YDL006W MET2P08465 486 aa3.75□□□□□ -1.81
PTC1YDL006W YPK2P18961 677 aa3.75□□□□□ -1.81
PTC1YDL006W PHO80P20052 293 aa3.75□□□□□ -1.81
PTC1YDL006W DPB2P24482 689 aaPredicted RBP3.75□□□□□ -1.81
PTC1YDL006W RPL5P26321 297 aaKnown RBP3.75□□□□□ -1.81
PTC1YDL006W SUR1P33300 382 aa3.75□□□□□ -1.81
PTC1YDL006W YKL071WP36086 256 aa3.75□□□□□ -1.81
PTC1YDL006W GRE3P38715 327 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
PTC1YDL006W OXA1P39952 402 aa3.75□□□□□ -1.81
PTC1YDL006W DDI1P40087 428 aa3.75□□□□□ -1.81
PTC1YDL006W DFG10P40526 253 aa3.75□□□□□ -1.81
PTC1YDL006W NAS2P40555 220 aa3.75□□□□□ -1.81
PTC1YDL006W YGL235WP53071 178 aa3.75□□□□□ -1.81
PTC1YDL006W OST6Q03723 332 aa3.75□□□□□ -1.81
PTC1YDL006W RNH1Q04740 348 aa3.75□□□□□ -1.81
PTC1YDL006W YMR315WQ04869 349 aaKnown RBP3.75□□□□□ -1.81
PTC1YDL006W GAT3Q07928 141 aa3.75□□□□□ -1.81
PTC1YDL006W PML1Q07930 204 aaPredicted RBP3.75□□□□□ -1.81
PTC1YDL006W TMC1Q08422 150 aaPredicted RBP3.75□□□□□ -1.81
PTC1YDL006W HMS1Q12398 434 aa3.75□□□□□ -1.81
PTC1YDL006W REP1P03871 373 aa3.74□□□□□ -1.81
PTC1YDL006W YGL041W-AP0C5N3 154 aa3.74□□□□□ -1.81
PTC1YDL006W RPS16AP0CX51 143 aaKnown RBP3.74□□□□□ -1.81
PTC1YDL006W RPS16BP0CX52 143 aaKnown RBP3.74□□□□□ -1.81
PTC1YDL006W YHR214C-DP0CX93 97 aa3.74□□□□□ -1.81
PTC1YDL006W SAG1P20840 650 aa3.74□□□□□ -1.81
PTC1YDL006W YCR102CP25608 368 aa3.74□□□□□ -1.81
PTC1YDL006W TPO5P36029 618 aa3.74□□□□□ -1.81
PTC1YDL006W OM14P38325 134 aa3.74□□□□□ -1.81
PTC1YDL006W STB1P42845 420 aa3.74□□□□□ -1.81
PTC1YDL006W YFR054CP43622 192 aa3.74□□□□□ -1.81
PTC1YDL006W PGA1P53896 198 aa3.74□□□□□ -1.81
PTC1YDL006W SRL4Q03085 281 aa3.74□□□□□ -1.81
PTC1YDL006W MAK3Q03503 176 aa3.74□□□□□ -1.81
PTC1YDL006W SNX41Q04053 625 aa3.74□□□□□ -1.81
PTC1YDL006W MGR3Q04472 501 aa3.74□□□□□ -1.81
PTC1YDL006W COX20Q04935 205 aa3.74□□□□□ -1.81
PTC1YDL006W IRC19Q07843 230 aa3.74□□□□□ -1.81
PTC1YDL006W COQ10Q08058 207 aa3.74□□□□□ -1.81
PTC1YDL006W YOL024WQ08172 172 aa3.74□□□□□ -1.81
PTC1YDL006W BTS1Q12051 335 aa3.74□□□□□ -1.81
PTC1YDL006W MDM32Q12171 622 aa3.74□□□□□ -1.81
PTC1YDL006W YFR010W-AP0C5N0 62 aa3.73□□□□□ -1.81
PTC1YDL006W RPS18AP0CX55 146 aaKnown RBP3.73□□□□□ -1.81
PTC1YDL006W RPS18BP0CX56 146 aaPredicted RBP3.73□□□□□ -1.81
PTC1YDL006W RPL24BP24000 155 aaKnown RBP3.73□□□□□ -1.81
PTC1YDL006W RPL16AP26784 199 aaKnown RBP3.73□□□□□ -1.81
PTC1YDL006W EHD3P28817 500 aa3.73□□□□□ -1.81
PTC1YDL006W MDH3P32419 343 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
PTC1YDL006W MSN4P33749 630 aa3.73□□□□□ -1.81
PTC1YDL006W SHE1P38200 338 aa3.73□□□□□ -1.81
PTC1YDL006W NVJ1P38881 321 aa3.73□□□□□ -1.81
PTC1YDL006W YER184CP39961 794 aa3.73□□□□□ -1.81
PTC1YDL006W FMC1P40491 155 aa3.73□□□□□ -1.81
PTC1YDL006W RPE1P46969 238 aa3.73□□□□□ -1.81
PTC1YDL006W MPP6P53725 186 aaPredicted RBP3.73□□□□□ -1.81
PTC1YDL006W YPL039WQ03080 316 aa3.73□□□□□ -1.81
PTC1YDL006W GRX3Q03835 250 aa3.73□□□□□ -1.81
PTC1YDL006W MIX14Q04341 121 aa3.73□□□□□ -1.81
PTC1YDL006W YPL278CQ08990 100 aa3.73□□□□□ -1.81
PTC1YDL006W YOR289WQ12012 251 aaPredicted RBP3.73□□□□□ -1.81
PTC1YDL006W HEM4P06174 275 aa3.72□□□□□ -1.81
PTC1YDL006W CDC50P25656 391 aa3.72□□□□□ -1.81
PTC1YDL006W UTP11P34247 250 aaPredicted RBP3.72□□□□□ -1.81
PTC1YDL006W YBR063CP38083 404 aa3.72□□□□□ -1.81
PTC1YDL006W FMP23P38231 175 aa3.72□□□□□ -1.81
PTC1YDL006W ECO1P43605 281 aa3.72□□□□□ -1.81
PTC1YDL006W KEG1P43614 200 aa3.72□□□□□ -1.81
PTC1YDL006W CIN2P46670 268 aa3.72□□□□□ -1.81
PTC1YDL006W YHC3P47040 408 aa3.72□□□□□ -1.81
PTC1YDL006W PGU1P47180 361 aa3.72□□□□□ -1.81
PTC1YDL006W BRR6P53062 197 aa3.72□□□□□ -1.81
PTC1YDL006W VOA1P53262 265 aa3.72□□□□□ -1.81
PTC1YDL006W SDC1Q03323 175 aa3.72□□□□□ -1.81
PTC1YDL006W YDR209CQ03480 137 aa3.72□□□□□ -1.81
PTC1YDL006W RRP17Q04031 235 aaPredicted RBP3.72□□□□□ -1.81
PTC1YDL006W GAL83Q04739 417 aa3.72□□□□□ -1.81
PTC1YDL006W YLR173WQ06247 608 aa3.72□□□□□ -1.81
PTC1YDL006W TAZ1Q06510 381 aa3.72□□□□□ -1.81
PTC1YDL006W HRT1Q08273 121 aa3.72□□□□□ -1.81
PTC1YDL006W RDL2Q08742 149 aaKnown RBP3.72□□□□□ -1.81
PTC1YDL006W YRA1Q12159 226 aaKnown RBP3.72□□□□□ -1.81
PTC1YDL006W YAL064W-BO13512 126 aa3.71□□□□□ -1.82
PTC1YDL006W KIN28P06242 306 aa3.71□□□□□ -1.82
PTC1YDL006W GIT1P25346 518 aa3.71□□□□□ -1.82
PTC1YDL006W ARO7P32178 256 aa3.71□□□□□ -1.82
PTC1YDL006W ECT1P33412 323 aa3.71□□□□□ -1.82
PTC1YDL006W DTR1P38125 572 aa3.71□□□□□ -1.82
PTC1YDL006W MAL32P38158 584 aa3.71□□□□□ -1.82
PTC1YDL006W RTT105P40063 208 aa3.71□□□□□ -1.82
PTC1YDL006W PFS2P42841 465 aaKnown RBP3.71□□□□□ -1.82
PTC1YDL006W LST7P53237 242 aa3.71□□□□□ -1.82
PTC1YDL006W MAL12P53341 584 aa3.71□□□□□ -1.82
PTC1YDL006W SCS7Q03529 384 aa3.71□□□□□ -1.82
PTC1YDL006W YPR147CQ06522 304 aaKnown RBP3.71□□□□□ -1.82
PTC1YDL006W IES3Q12345 250 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms