RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeastyeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP30YCR021C APL3P38065 1025 aa3.44□□□□□ -1.86
HSP30YCR021C UMP1P38293 148 aa3.44□□□□□ -1.86
HSP30YCR021C YBR220CP38318 560 aa3.44□□□□□ -1.86
HSP30YCR021C YGP1P38616 354 aaKnown RBP3.44□□□□□ -1.86
HSP30YCR021C BNA6P43619 295 aa3.44□□□□□ -1.86
HSP30YCR021C UBC13P52490 153 aa3.44□□□□□ -1.86
HSP30YCR021C UFD1P53044 361 aa3.44□□□□□ -1.86
HSP30YCR021C ALG12P53730 551 aa3.44□□□□□ -1.86
HSP30YCR021C MRPL19P53875 158 aa3.44□□□□□ -1.86
HSP30YCR021C RSM23Q01163 450 aa3.44□□□□□ -1.86
HSP30YCR021C RPL6AQ02326 176 aaKnown RBP3.44□□□□□ -1.86
HSP30YCR021C KEI1Q06346 221 aa3.44□□□□□ -1.86
HSP30YCR021C YOL118CQ08259 102 aa3.44□□□□□ -1.86
HSP30YCR021C TMC1Q08422 150 aaPredicted RBP3.44□□□□□ -1.86
HSP30YCR021C RRS1Q08746 203 aaKnown RBP3.44□□□□□ -1.86
HSP30YCR021C FEX2Q08991 375 aa3.44□□□□□ -1.86
HSP30YCR021C YOR029WQ12243 111 aa3.44□□□□□ -1.86
HSP30YCR021C YLR108CQ12259 485 aa3.44□□□□□ -1.86
HSP30YCR021C MPD1Q12404 318 aaKnown RBP3.44□□□□□ -1.86
HSP30YCR021C RRI1Q12468 440 aa3.44□□□□□ -1.86
HSP30YCR021C YBR085C-AO43137 85 aa3.43□□□□□ -1.86
HSP30YCR021C TDH3P00359 332 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
HSP30YCR021C RPL39P04650 51 aa3.43□□□□□ -1.86
HSP30YCR021C RPL35AP0CX84 120 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C RPL35BP0CX85 120 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C MATALPHA1P0CY06 175 aa3.43□□□□□ -1.86
HSP30YCR021C HMLALPHA1P0CY07 175 aa3.43□□□□□ -1.86
HSP30YCR021C MRP2P10663 115 aaPredicted RBP3.43□□□□□ -1.86
HSP30YCR021C NHP6BP11633 99 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C RPL30P14120 105 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C RFA1P22336 621 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C VMA5P31412 392 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C AFG1P32317 509 aa3.43□□□□□ -1.86
HSP30YCR021C CLB6P32943 380 aa3.43□□□□□ -1.86
HSP30YCR021C SNC2P33328 115 aa3.43□□□□□ -1.86
HSP30YCR021C PPZ2P33329 710 aa3.43□□□□□ -1.86
HSP30YCR021C RRF1P38771 230 aa3.43□□□□□ -1.86
HSP30YCR021C CTR2P38865 189 aa3.43□□□□□ -1.86
HSP30YCR021C YER079WP40052 210 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C AVT7P40501 490 aa3.43□□□□□ -1.86
HSP30YCR021C BXI1P48558 297 aa3.43□□□□□ -1.86
HSP30YCR021C AVT4P50944 713 aa3.43□□□□□ -1.86
HSP30YCR021C NSA1P53136 463 aaPredicted RBP3.43□□□□□ -1.86
HSP30YCR021C MTL1P53214 551 aa3.43□□□□□ -1.86
HSP30YCR021C SCW4P53334 386 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C NRK1P53915 240 aa3.43□□□□□ -1.86
HSP30YCR021C CRZ1P53968 678 aa3.43□□□□□ -1.86
HSP30YCR021C HHT1P61830 136 aa3.43□□□□□ -1.86
HSP30YCR021C PRM15Q03262 622 aa3.43□□□□□ -1.86
HSP30YCR021C YMR279CQ03263 540 aa3.43□□□□□ -1.86
HSP30YCR021C NGL2Q03264 515 aaKnown RBP3.43□□□□□ -1.86
HSP30YCR021C YDR415CQ04033 374 aaPredicted RBP3.43□□□□□ -1.86
HSP30YCR021C PEX30Q06169 523 aa3.43□□□□□ -1.86
HSP30YCR021C LUC7Q07508 261 aaPredicted RBP3.43□□□□□ -1.86
HSP30YCR021C FRE3Q08905 711 aa3.43□□□□□ -1.86
HSP30YCR021C ATP14Q12349 124 aa3.43□□□□□ -1.86
HSP30YCR021C RAD52P06778 471 aaKnown RBP3.42□□□□□ -1.86
HSP30YCR021C ARG80P07249 177 aa3.42□□□□□ -1.86
HSP30YCR021C SAG1P20840 650 aa3.42□□□□□ -1.86
HSP30YCR021C CDC39P25655 2108 aaKnown RBP3.42□□□□□ -1.86
HSP30YCR021C DAL80P26343 269 aa3.42□□□□□ -1.86
HSP30YCR021C RPD3P32561 433 aa3.42□□□□□ -1.86
HSP30YCR021C REC114P32841 428 aa3.42□□□□□ -1.86
HSP30YCR021C CBT1P36038 271 aaPredicted RBP3.42□□□□□ -1.86
HSP30YCR021C LSM12P38828 187 aaKnown RBP3.42□□□□□ -1.86
HSP30YCR021C ECM14P38836 430 aa3.42□□□□□ -1.86
HSP30YCR021C YMR144WP40214 342 aaKnown RBP3.42□□□□□ -1.86
HSP30YCR021C YIP5P53108 310 aa3.42□□□□□ -1.86
HSP30YCR021C GPG1P53130 126 aa3.42□□□□□ -1.86
HSP30YCR021C OKP1P53298 406 aa3.42□□□□□ -1.86
HSP30YCR021C YNR048WP53740 393 aa3.42□□□□□ -1.86
HSP30YCR021C CTF19Q02732 369 aa3.42□□□□□ -1.86
HSP30YCR021C DIG2Q03373 323 aaKnown RBP3.42□□□□□ -1.86
HSP30YCR021C CAC2Q04199 468 aa3.42□□□□□ -1.86
HSP30YCR021C AEP3Q12089 606 aa3.42□□□□□ -1.86
HSP30YCR021C EAF3Q12432 401 aa3.42□□□□□ -1.86
HSP30YCR021C YOR192C-CQ3E736 78 aa3.42□□□□□ -1.86
HSP30YCR021C CNB1P25296 175 aa3.41□□□□□ -1.86
HSP30YCR021C SPC29P33419 253 aa3.41□□□□□ -1.86
HSP30YCR021C COS8P38723 381 aa3.41□□□□□ -1.86
HSP30YCR021C GEP4P38812 185 aa3.41□□□□□ -1.86
HSP30YCR021C SMB1P40018 196 aaKnown RBP3.41□□□□□ -1.86
HSP30YCR021C QRI1P43123 477 aaKnown RBP3.41□□□□□ -1.86
HSP30YCR021C GWT1P47026 490 aa3.41□□□□□ -1.86
HSP30YCR021C PEF1P53238 335 aa3.41□□□□□ -1.86
HSP30YCR021C APJ1P53940 528 aa3.41□□□□□ -1.86
HSP30YCR021C ARG5,6Q01217 863 aa3.41□□□□□ -1.86
HSP30YCR021C ACS1Q01574 713 aa3.41□□□□□ -1.86
HSP30YCR021C YDR391CQ04170 232 aa3.41□□□□□ -1.86
HSP30YCR021C UTP15Q04305 513 aaKnown RBP3.41□□□□□ -1.86
HSP30YCR021C SNU23Q12368 194 aaPredicted RBP3.41□□□□□ -1.86
HSP30YCR021C TDH1P00360 332 aaKnown RBP3.4□□□□□ -1.87
HSP30YCR021C CDC28P00546 298 aaKnown RBP3.4□□□□□ -1.87
HSP30YCR021C URA6P15700 204 aa3.4□□□□□ -1.87
HSP30YCR021C CDC23P16522 626 aa3.4□□□□□ -1.87
HSP30YCR021C HNM1P19807 563 aa3.4□□□□□ -1.87
HSP30YCR021C CKS1P20486 150 aaKnown RBP3.4□□□□□ -1.87
HSP30YCR021C MRS4P23500 304 aa3.4□□□□□ -1.87
HSP30YCR021C IMP1P28627 190 aa3.4□□□□□ -1.87
HSP30YCR021C ACB1P31787 87 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms