RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C MHT1Q12525 324 aa1.53□□□□□ -2.16
TRS20YBR254C LSO2Q3E772 92 aaKnown RBP1.53□□□□□ -2.16
TRS20YBR254C SIR4P11978 1358 aa1.52□□□□□ -2.17
TRS20YBR254C ARG80P07249 177 aa1.52□□□□□ -2.17
TRS20YBR254C YPT52P36018 234 aaKnown RBP1.52□□□□□ -2.17
TRS20YBR254C YAR068WP39564 161 aa1.52□□□□□ -2.17
TRS20YBR254C MRPL49P40858 161 aaPredicted RBP1.52□□□□□ -2.17
TRS20YBR254C IRC18P47056 224 aa1.52□□□□□ -2.17
TRS20YBR254C ALG13P53178 202 aa1.52□□□□□ -2.17
TRS20YBR254C DID2P69771 204 aa1.52□□□□□ -2.17
TRS20YBR254C PRM15Q03262 622 aa1.52□□□□□ -2.17
TRS20YBR254C YKL183C-AQ3E765 70 aa1.52□□□□□ -2.17
TRS20YBR254C CDC33P07260 213 aaKnown RBP1.51□□□□□ -2.17
TRS20YBR254C IDH1P28834 360 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
TRS20YBR254C SIP3P38717 1229 aa1.51□□□□□ -2.17
TRS20YBR254C DOG2P38773 246 aa1.51□□□□□ -2.17
TRS20YBR254C DOG1P38774 246 aa1.51□□□□□ -2.17
TRS20YBR254C RTC3P38804 111 aaPredicted RBP1.51□□□□□ -2.17
TRS20YBR254C PEX17P40155 199 aa1.51□□□□□ -2.17
TRS20YBR254C YNL194CP40169 301 aa1.51□□□□□ -2.17
TRS20YBR254C RSM25P40496 264 aa1.51□□□□□ -2.17
TRS20YBR254C SNX4P47057 423 aa1.51□□□□□ -2.17
TRS20YBR254C BXI1P48558 297 aa1.51□□□□□ -2.17
TRS20YBR254C TOS8P53147 276 aa1.51□□□□□ -2.17
TRS20YBR254C ERV29P53337 310 aa1.51□□□□□ -2.17
TRS20YBR254C COS6P53344 381 aa1.51□□□□□ -2.17
TRS20YBR254C MRPS17Q03246 237 aaPredicted RBP1.51□□□□□ -2.17
TRS20YBR254C NIP7Q08962 181 aaKnown RBP1.51□□□□□ -2.17
TRS20YBR254C VPS68Q12016 184 aa1.51□□□□□ -2.17
TRS20YBR254C YRA1Q12159 226 aaKnown RBP1.51□□□□□ -2.17
TRS20YBR254C CDC28P00546 298 aaKnown RBP1.5□□□□□ -2.17
TRS20YBR254C RPL9AP05738 191 aaKnown RBP1.5□□□□□ -2.17
TRS20YBR254C YHR032W-AP0C5N6 59 aa1.5□□□□□ -2.17
TRS20YBR254C GCN3P14741 305 aa1.5□□□□□ -2.17
TRS20YBR254C YIL001WP40560 513 aa1.5□□□□□ -2.17
TRS20YBR254C FAR7P43592 221 aa1.5□□□□□ -2.17
TRS20YBR254C YJR056CP47115 236 aa1.5□□□□□ -2.17
TRS20YBR254C ADO1P47143 340 aaKnown RBP1.5□□□□□ -2.17
TRS20YBR254C YJR146WP47174 117 aa1.5□□□□□ -2.17
TRS20YBR254C RPL9BP51401 191 aaKnown RBP1.5□□□□□ -2.17
TRS20YBR254C YDR248CQ03786 193 aa1.5□□□□□ -2.17
TRS20YBR254C GRX3Q03835 250 aa1.5□□□□□ -2.17
TRS20YBR254C AKR2Q12013 749 aa1.5□□□□□ -2.17
TRS20YBR254C ADF1Q2V2Q1 113 aa1.5□□□□□ -2.17
TRS20YBR254C YPL229WQ99395 206 aa1.5□□□□□ -2.17
TRS20YBR254C YDR157WA0A023PZE8 133 aa1.49□□□□□ -2.17
TRS20YBR254C PUT1P09368 476 aa1.49□□□□□ -2.17
TRS20YBR254C SRY1P36007 326 aa1.49□□□□□ -2.17
TRS20YBR254C ECM33P38248 429 aaKnown RBP1.49□□□□□ -2.17
TRS20YBR254C IKI1P38874 309 aa1.49□□□□□ -2.17
TRS20YBR254C RFC4P40339 323 aaKnown RBP1.49□□□□□ -2.17
TRS20YBR254C RPA43P46669 326 aa1.49□□□□□ -2.17
TRS20YBR254C MGA1P53050 456 aa1.49□□□□□ -2.17
TRS20YBR254C PRM8P53174 237 aa1.49□□□□□ -2.17
TRS20YBR254C CAB4P53332 305 aa1.49□□□□□ -2.17
TRS20YBR254C PDR17P53844 350 aa1.49□□□□□ -2.17
TRS20YBR254C YOR283WQ12040 230 aaKnown RBP1.49□□□□□ -2.17
TRS20YBR254C ATO3Q12359 275 aa1.49□□□□□ -2.17
TRS20YBR254C EMC6Q12431 108 aa1.49□□□□□ -2.17
TRS20YBR254C MSW1P04803 379 aa1.48□□□□□ -2.17
TRS20YBR254C DBF2P22204 572 aa1.48□□□□□ -2.17
TRS20YBR254C PRX1P34227 261 aaKnown RBP1.48□□□□□ -2.17
TRS20YBR254C SKG1P36169 355 aa1.48□□□□□ -2.17
TRS20YBR254C TRM5P38793 499 aa1.48□□□□□ -2.17
TRS20YBR254C CWC23P52868 283 aaPredicted RBP1.48□□□□□ -2.17
TRS20YBR254C YGR219WP53307 113 aa1.48□□□□□ -2.17
TRS20YBR254C CUS2P53830 285 aaPredicted RBP1.48□□□□□ -2.17
TRS20YBR254C CGI121Q03705 181 aaKnown RBP1.48□□□□□ -2.17
TRS20YBR254C LPP1Q04396 274 aa1.48□□□□□ -2.17
TRS20YBR254C YHR139C-AO13536 103 aa1.47□□□□□ -2.17
TRS20YBR254C CDC8P00572 216 aa1.47□□□□□ -2.17
TRS20YBR254C HTB1P02293 131 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C HTB2P02294 131 aa1.47□□□□□ -2.17
TRS20YBR254C RPL27AP0C2H6 136 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C RPL27BP0C2H7 136 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C YPR170W-BP0C5R9 85 aa1.47□□□□□ -2.17
TRS20YBR254C MATALPHA2P0CY08 210 aa1.47□□□□□ -2.17
TRS20YBR254C HMLALPHA2P0CY09 210 aa1.47□□□□□ -2.17
TRS20YBR254C CBF1P17106 351 aa1.47□□□□□ -2.17
TRS20YBR254C SCO1P23833 295 aa1.47□□□□□ -2.17
TRS20YBR254C ATG22P25568 528 aa1.47□□□□□ -2.17
TRS20YBR254C OAC1P32332 324 aa1.47□□□□□ -2.17
TRS20YBR254C MGM101P32787 269 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C APS1P35181 156 aa1.47□□□□□ -2.17
TRS20YBR254C MRPL28P36527 147 aa1.47□□□□□ -2.17
TRS20YBR254C IRC22P40006 225 aa1.47□□□□□ -2.17
TRS20YBR254C YNL010WP53981 241 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C ABP140Q08641 628 aaKnown RBP1.47□□□□□ -2.17
TRS20YBR254C GET4Q12125 312 aa1.47□□□□□ -2.17
TRS20YBR254C TDA8Q6B2U8 126 aa1.47□□□□□ -2.17
TRS20YBR254C JIP3O13555 125 aa1.46□□□□□ -2.18
TRS20YBR254C TAF14P35189 244 aa1.46□□□□□ -2.18
TRS20YBR254C YOR062CP36025 268 aa1.46□□□□□ -2.18
TRS20YBR254C GRE3P38715 327 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
TRS20YBR254C RMD6P39975 231 aa1.46□□□□□ -2.18
TRS20YBR254C SMD3P43321 101 aaKnown RBP1.46□□□□□ -2.18
TRS20YBR254C CIS3P47001 227 aa1.46□□□□□ -2.18
TRS20YBR254C DAN1P47178 298 aa1.46□□□□□ -2.18
TRS20YBR254C GIM3P53900 129 aa1.46□□□□□ -2.18
TRS20YBR254C SNZ1Q03148 297 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms