RNA–Protein interactions for RNA: YBL050W

SEC17, Transcript of Alpha-SNAP cochaperone, yeast

Gene SEC17, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC17	YBL050W	TSA2	Q04120	196 aa		4.81	□□□□□ -1.64
SEC17	YBL050W	YLR446W	Q06204	433 aa		4.81	□□□□□ -1.64
SEC17	YBL050W	FDH1	Q08911	376 aa		4.81	□□□□□ -1.64
SEC17	YBL050W	EAF3	Q12432	401 aa		4.81	□□□□□ -1.64
SEC17	YBL050W	PRM4	Q12498	284 aa		4.81	□□□□□ -1.64
SEC17	YBL050W	SEC59	P20048	519 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	ERG24	P32462	438 aa	Known RBP	4.8	□□□□□ -1.64
SEC17	YBL050W	YPT53	P36019	220 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	YIL060W	P40519	144 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	TES1	P41903	349 aa	Known RBP	4.8	□□□□□ -1.64
SEC17	YBL050W	SDT1	P53078	280 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	TOS8	P53147	276 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	AIM36	Q03798	255 aa		4.8	□□□□□ -1.64
SEC17	YBL050W	FCF2	Q12035	217 aa	Predicted RBP	4.8	□□□□□ -1.64
SEC17	YBL050W	RPL2A	P0CX45	254 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	RPL2B	P0CX46	254 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	GPA2	P10823	449 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	YMC1	P32331	307 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	RNP1	P32385	249 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	SNC2	P33328	115 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	TSA1	P34760	196 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	HMF1	P40037	129 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	TIF34	P40217	347 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	GWT1	P47026	490 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	YGL034C	P53186	121 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	HST4	P53688	370 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	LSM7	P53905	115 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	SUR7	P54003	302 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	LSM3	P57743	89 aa	Known RBP	4.79	□□□□□ -1.64
SEC17	YBL050W	AIM11	P87275	137 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	YML018C	Q03730	393 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	YPR114W	Q06107	315 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	FCY1	Q12178	158 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	YLR099W-A	Q3E798	87 aa		4.79	□□□□□ -1.64
SEC17	YBL050W	EDE1	P34216	1381 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	YER145C-A	A0A023PYF4	145 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	RPL7A	P05737	244 aa	Known RBP	4.78	□□□□□ -1.64
SEC17	YBL050W	UBI4	P0CG63	381 aa	Known RBP	4.78	□□□□□ -1.64
SEC17	YBL050W	CAP2	P13517	287 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	ERD2	P18414	219 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	ARN2	P38724	620 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	MOB1	P40484	314 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	CDC1	P40986	491 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	GLR1	P41921	483 aa	Known RBP	4.78	□□□□□ -1.64
SEC17	YBL050W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SEC17	YBL050W	SDC1	Q03323	175 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	SCS7	Q03529	384 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	OSW1	Q08692	278 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	RPL7B	Q12213	244 aa	Known RBP	4.78	□□□□□ -1.64
SEC17	YBL050W	SAS5	Q99314	248 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	SPP41	P38904	1435 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	BUD4	P47136	1447 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	PSK1	P31374	1356 aa		4.78	□□□□□ -1.64
SEC17	YBL050W	SPS100	P13130	326 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	STP22	P25604	385 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	YCR100C	P25606	316 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	YCR090C	P25654	182 aa	Known RBP	4.77	□□□□□ -1.65
SEC17	YBL050W	PMU1	P36069	295 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	SOL2	P37262	315 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	NAT2	P37293	288 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	ARK1	P53974	638 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	SMX3	P54999	86 aa	Predicted RBP	4.77	□□□□□ -1.65
SEC17	YBL050W	MCH1	Q07376	486 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	DGA1	Q08650	418 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	TIM18	Q08749	192 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	FRE8	Q12209	686 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	BNR1	P40450	1375 aa		4.77	□□□□□ -1.65
SEC17	YBL050W	PDR18	P53756	1333 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	RPN13	O13563	156 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	SIR2	P06700	562 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	SEC4	P07560	215 aa	Known RBP	4.76	□□□□□ -1.65
SEC17	YBL050W	MDM10	P18409	493 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	RPL16A	P26784	199 aa	Known RBP	4.76	□□□□□ -1.65
SEC17	YBL050W	TIP1	P27654	210 aa	Predicted RBP	4.76	□□□□□ -1.65
SEC17	YBL050W	COQ3	P27680	312 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	CTS1	P29029	562 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YKL102C	P34249	101 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	PTC1	P35182	281 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YOR062C	P36025	268 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	RPF1	P38805	295 aa	Known RBP	4.76	□□□□□ -1.65
SEC17	YBL050W	YPL073C	P40323	161 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	RPE1	P46969	238 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	AVT1	P47082	602 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	PHO23	P50947	330 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YDL218W	Q07629	317 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YAP7	Q08182	245 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YLR118C	Q12354	227 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YPR014C	Q6B0W2	109 aa		4.76	□□□□□ -1.65
SEC17	YBL050W	YMR316C-A	I2HB70	103 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	TKL2	P33315	681 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	DLS1	P40366	167 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	XBP1	P40489	647 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	YFL015C	P43578	164 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	MDM34	P53083	459 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	IDP3	P53982	420 aa	Known RBP	4.75	□□□□□ -1.65
SEC17	YBL050W	ODC1	Q03028	310 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	DIG2	Q03373	323 aa	Known RBP	4.75	□□□□□ -1.65
SEC17	YBL050W	CGI121	Q03705	181 aa	Known RBP	4.75	□□□□□ -1.65
SEC17	YBL050W	PFA4	Q12006	378 aa		4.75	□□□□□ -1.65
SEC17	YBL050W	MPD1	Q12404	318 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms