RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C YIL067CP40514 678 aa4.87□□□□□ -1.63
RFA1YAR007C NAS2P40555 220 aa4.87□□□□□ -1.63
RFA1YAR007C COX16P47081 118 aa4.87□□□□□ -1.63
RFA1YAR007C VEL1P53058 206 aa4.87□□□□□ -1.63
RFA1YAR007C OGG1P53397 376 aaPredicted RBP4.87□□□□□ -1.63
RFA1YAR007C VPS28Q02767 242 aa4.87□□□□□ -1.63
RFA1YAR007C PKR1Q03880 122 aaKnown RBP4.87□□□□□ -1.63
RFA1YAR007C FRQ1Q06389 190 aa4.87□□□□□ -1.63
RFA1YAR007C PIN3Q06449 215 aa4.87□□□□□ -1.63
RFA1YAR007C YCT1Q12235 531 aa4.87□□□□□ -1.63
RFA1YAR007C RAX2Q12465 1220 aa4.87□□□□□ -1.63
RFA1YAR007C QCR2P07257 368 aa4.86□□□□□ -1.63
RFA1YAR007C OLE1P21147 510 aaKnown RBP4.86□□□□□ -1.63
RFA1YAR007C GAS1P22146 559 aaKnown RBP4.86□□□□□ -1.63
RFA1YAR007C NPR1P22211 790 aa4.86□□□□□ -1.63
RFA1YAR007C ELO2P25358 347 aa4.86□□□□□ -1.63
RFA1YAR007C AGP1P25376 633 aa4.86□□□□□ -1.63
RFA1YAR007C STP22P25604 385 aa4.86□□□□□ -1.63
RFA1YAR007C ARO4P32449 370 aaKnown RBP4.86□□□□□ -1.63
RFA1YAR007C AUR1P36107 401 aaPredicted RBP4.86□□□□□ -1.63
RFA1YAR007C YHR210CP38893 341 aa4.86□□□□□ -1.63
RFA1YAR007C IRC22P40006 225 aa4.86□□□□□ -1.63
RFA1YAR007C LRO1P40345 661 aa4.86□□□□□ -1.63
RFA1YAR007C YIL152WP40455 235 aa4.86□□□□□ -1.63
RFA1YAR007C YIL089WP40500 205 aa4.86□□□□□ -1.63
RFA1YAR007C YLR152CP54072 576 aa4.86□□□□□ -1.63
RFA1YAR007C YPL067CQ02754 198 aa4.86□□□□□ -1.63
RFA1YAR007C RPC11Q04307 110 aaPredicted RBP4.86□□□□□ -1.63
RFA1YAR007C FSH2Q05015 223 aa4.86□□□□□ -1.63
RFA1YAR007C MRX8Q05473 314 aa4.86□□□□□ -1.63
RFA1YAR007C HTB1P02293 131 aaKnown RBP4.86□□□□□ -1.63
RFA1YAR007C HTB2P02294 131 aa4.86□□□□□ -1.63
RFA1YAR007C PDX1P16451 410 aa4.86□□□□□ -1.63
RFA1YAR007C LSB5P25369 354 aa4.86□□□□□ -1.63
RFA1YAR007C TRS65P32893 560 aa4.86□□□□□ -1.63
RFA1YAR007C SLM6P38343 150 aa4.86□□□□□ -1.63
RFA1YAR007C SSH1P38353 490 aaKnown RBP4.86□□□□□ -1.63
RFA1YAR007C YBR292CP38357 123 aa4.86□□□□□ -1.63
RFA1YAR007C SMK1P41808 388 aa4.86□□□□□ -1.63
RFA1YAR007C YGR066CP53242 292 aa4.86□□□□□ -1.63
RFA1YAR007C YNR066CP53752 436 aa4.86□□□□□ -1.63
RFA1YAR007C SHH3Q04487 196 aa4.86□□□□□ -1.63
RFA1YAR007C YML053CQ04978 212 aa4.86□□□□□ -1.63
RFA1YAR007C CSI2Q08054 341 aa4.86□□□□□ -1.63
RFA1YAR007C NAT5Q08689 176 aa4.86□□□□□ -1.63
RFA1YAR007C MCT1Q12283 360 aa4.86□□□□□ -1.63
RFA1YAR007C SUT2Q12286 268 aa4.86□□□□□ -1.63
RFA1YAR007C ERP4Q12450 207 aa4.86□□□□□ -1.63
RFA1YAR007C ILV5P06168 395 aaKnown RBP4.85□□□□□ -1.63
RFA1YAR007C CYT1P07143 309 aa4.85□□□□□ -1.63
RFA1YAR007C ATG27P46989 271 aa4.85□□□□□ -1.63
RFA1YAR007C THI74Q04083 370 aa4.85□□□□□ -1.63
RFA1YAR007C YDR262WQ12331 272 aa4.85□□□□□ -1.63
RFA1YAR007C TOM1Q03280 3268 aa4.85□□□□□ -1.63
RFA1YAR007C HAP3P13434 144 aa4.84□□□□□ -1.63
RFA1YAR007C SAC7P17121 654 aa4.84□□□□□ -1.63
RFA1YAR007C STE18P18852 110 aa4.84□□□□□ -1.63
RFA1YAR007C RFA1P22336 621 aaKnown RBP4.84□□□□□ -1.63
RFA1YAR007C YKL071WP36086 256 aa4.84□□□□□ -1.63
RFA1YAR007C UMP1P38293 148 aa4.84□□□□□ -1.63
RFA1YAR007C OM14P38325 134 aa4.84□□□□□ -1.63
RFA1YAR007C ANS1P38832 159 aa4.84□□□□□ -1.63
RFA1YAR007C RPL13BP40212 199 aaKnown RBP4.84□□□□□ -1.63
RFA1YAR007C YMR082CQ04276 118 aa4.84□□□□□ -1.63
RFA1YAR007C SME1Q12330 94 aaPredicted RBP4.84□□□□□ -1.63
RFA1YAR007C NPC2Q12408 173 aa4.84□□□□□ -1.63
RFA1YAR007C YLR111WQ12528 110 aa4.84□□□□□ -1.63
RFA1YAR007C RPL13AQ12690 199 aaPredicted RBP4.84□□□□□ -1.63
RFA1YAR007C TDH3P00359 332 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
RFA1YAR007C NHP6AP11632 93 aaKnown RBP4.83□□□□□ -1.64
RFA1YAR007C MIG1P27705 504 aa4.83□□□□□ -1.64
RFA1YAR007C SSH4P32343 579 aa4.83□□□□□ -1.64
RFA1YAR007C DAL3P32459 195 aa4.83□□□□□ -1.64
RFA1YAR007C MOT2P34909 587 aaKnown RBP4.83□□□□□ -1.64
RFA1YAR007C YOR062CP36025 268 aa4.83□□□□□ -1.64
RFA1YAR007C ALG14P38242 237 aa4.83□□□□□ -1.64
RFA1YAR007C CUE1P38428 203 aa4.83□□□□□ -1.64
RFA1YAR007C YMR262WP38430 313 aa4.83□□□□□ -1.64
RFA1YAR007C CFD1P40558 293 aa4.83□□□□□ -1.64
RFA1YAR007C GPP1P41277 250 aaKnown RBP4.83□□□□□ -1.64
RFA1YAR007C GWT1P47026 490 aa4.83□□□□□ -1.64
RFA1YAR007C YGR250CP53316 781 aaKnown RBP4.83□□□□□ -1.64
RFA1YAR007C PAU4P53427 120 aa4.83□□□□□ -1.64
RFA1YAR007C YDL242WQ07746 117 aa4.83□□□□□ -1.64
RFA1YAR007C SWM1Q12379 170 aa4.83□□□□□ -1.64
RFA1YAR007C YOP1Q12402 180 aa4.83□□□□□ -1.64
RFA1YAR007C YLR358CO13565 187 aa4.83□□□□□ -1.64
RFA1YAR007C OPI3P05375 206 aa4.83□□□□□ -1.64
RFA1YAR007C PAU1P0CE88 120 aa4.83□□□□□ -1.64
RFA1YAR007C PAU14P0CE89 120 aa4.83□□□□□ -1.64
RFA1YAR007C PAU6P0CE90 120 aa4.83□□□□□ -1.64
RFA1YAR007C PAU18P0CE91 120 aa4.83□□□□□ -1.64
RFA1YAR007C PAU8P0CE92 120 aa4.83□□□□□ -1.64
RFA1YAR007C PAU11P0CE93 120 aa4.83□□□□□ -1.64
RFA1YAR007C CTA1P15202 515 aa4.83□□□□□ -1.64
RFA1YAR007C KRR1P25586 316 aaPredicted RBP4.83□□□□□ -1.64
RFA1YAR007C SRB5P32585 307 aa4.83□□□□□ -1.64
RFA1YAR007C PAD1P33751 242 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
RFA1YAR007C AIM29P36154 155 aa4.83□□□□□ -1.64
RFA1YAR007C POP7P38291 140 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms