RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUF22	RUF22	MCM22	P47167	239 aa		0.84	□□□□□ -2.27
RUF22	RUF22	NSA1	P53136	463 aa	Predicted RBP	0.84	□□□□□ -2.27
RUF22	RUF22	YNL046W	P53956	172 aa		0.84	□□□□□ -2.27
RUF22	RUF22	NUP49	Q02199	472 aa		0.84	□□□□□ -2.27
RUF22	RUF22	YMD8	Q03697	442 aa		0.84	□□□□□ -2.27
RUF22	RUF22	YLR126C	Q12288	251 aa		0.84	□□□□□ -2.27
RUF22	RUF22	LSO2	Q3E772	92 aa	Known RBP	0.84	□□□□□ -2.27
RUF22	RUF22	SIR4	P11978	1358 aa		0.83	□□□□□ -2.28
RUF22	RUF22	FCY2	P17064	533 aa		0.83	□□□□□ -2.28
RUF22	RUF22	ERD2	P18414	219 aa		0.83	□□□□□ -2.28
RUF22	RUF22	FPR1	P20081	114 aa	Known RBP	0.83	□□□□□ -2.28
RUF22	RUF22	RPL24B	P24000	155 aa	Known RBP	0.83	□□□□□ -2.28
RUF22	RUF22	VPS21	P36017	210 aa	Known RBP	0.83	□□□□□ -2.28
RUF22	RUF22	RIB1	P38066	345 aa		0.83	□□□□□ -2.28
RUF22	RUF22	TCD1	P38756	429 aa		0.83	□□□□□ -2.28
RUF22	RUF22	RPF1	P38805	295 aa	Known RBP	0.83	□□□□□ -2.28
RUF22	RUF22	GLE2	P40066	365 aa		0.83	□□□□□ -2.28
RUF22	RUF22	CAT5	P41735	233 aa		0.83	□□□□□ -2.28
RUF22	RUF22	NUP57	P48837	541 aa		0.83	□□□□□ -2.28
RUF22	RUF22	CFT1	Q06632	1357 aa	Known RBP	0.83	□□□□□ -2.28
RUF22	RUF22	SPT3	P06844	337 aa		0.82	□□□□□ -2.28
RUF22	RUF22	BCY1	P07278	416 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	RPO26	P20435	155 aa		0.82	□□□□□ -2.28
RUF22	RUF22	CDC10	P25342	322 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	PPA2	P28239	310 aa		0.82	□□□□□ -2.28
RUF22	RUF22	VMA6	P32366	345 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	BMH2	P34730	273 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	YBR063C	P38083	404 aa		0.82	□□□□□ -2.28
RUF22	RUF22	SVP26	P38869	228 aa		0.82	□□□□□ -2.28
RUF22	RUF22	YER085C	P40058	173 aa		0.82	□□□□□ -2.28
RUF22	RUF22	AGE2	P40529	298 aa		0.82	□□□□□ -2.28
RUF22	RUF22	RPC17	P47076	161 aa		0.82	□□□□□ -2.28
RUF22	RUF22	TRM9	P49957	279 aa		0.82	□□□□□ -2.28
RUF22	RUF22	FYV6	P53913	173 aa		0.82	□□□□□ -2.28
RUF22	RUF22	DID2	P69771	204 aa		0.82	□□□□□ -2.28
RUF22	RUF22	HEM25	Q07534	307 aa		0.82	□□□□□ -2.28
RUF22	RUF22	CSI2	Q08054	341 aa		0.82	□□□□□ -2.28
RUF22	RUF22	NIP7	Q08962	181 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	RUD3	Q12234	484 aa	Known RBP	0.82	□□□□□ -2.28
RUF22	RUF22	TPO4	Q12256	659 aa		0.82	□□□□□ -2.28
RUF22	RUF22	CDC8	P00572	216 aa		0.81	□□□□□ -2.28
RUF22	RUF22	GRX2	P17695	143 aa	Known RBP	0.81	□□□□□ -2.28
RUF22	RUF22	ECM33	P38248	429 aa	Known RBP	0.81	□□□□□ -2.28
RUF22	RUF22	DOG2	P38773	246 aa		0.81	□□□□□ -2.28
RUF22	RUF22	YHR180W	P38868	163 aa		0.81	□□□□□ -2.28
RUF22	RUF22	PEX17	P40155	199 aa		0.81	□□□□□ -2.28
RUF22	RUF22	RPL13B	P40212	199 aa	Known RBP	0.81	□□□□□ -2.28
RUF22	RUF22	YRB1	P41920	201 aa	Known RBP	0.81	□□□□□ -2.28
RUF22	RUF22	RPA43	P46669	326 aa		0.81	□□□□□ -2.28
RUF22	RUF22	YJR149W	P47177	404 aa		0.81	□□□□□ -2.28
RUF22	RUF22	MIC26	P50087	233 aa		0.81	□□□□□ -2.28
RUF22	RUF22	PRM8	P53174	237 aa		0.81	□□□□□ -2.28
RUF22	RUF22	ERV29	P53337	310 aa		0.81	□□□□□ -2.28
RUF22	RUF22	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
RUF22	RUF22	SML1	Q04964	104 aa		0.81	□□□□□ -2.28
RUF22	RUF22	ARR2	Q06597	130 aa		0.81	□□□□□ -2.28
RUF22	RUF22	RPL13A	Q12690	199 aa	Predicted RBP	0.81	□□□□□ -2.28
RUF22	RUF22	RPL28	P02406	149 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	YPR170W-B	P0C5R9	85 aa		0.8	□□□□□ -2.28
RUF22	RUF22	RPL2A	P0CX45	254 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	RPL2B	P0CX46	254 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	MATALPHA1	P0CY06	175 aa		0.8	□□□□□ -2.28
RUF22	RUF22	HMLALPHA1	P0CY07	175 aa		0.8	□□□□□ -2.28
RUF22	RUF22	URA6	P15700	204 aa		0.8	□□□□□ -2.28
RUF22	RUF22	PET9	P18239	318 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	ATG22	P25568	528 aa		0.8	□□□□□ -2.28
RUF22	RUF22	RPS5	P26783	225 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	NTF2	P33331	125 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	SKG1	P36169	355 aa		0.8	□□□□□ -2.28
RUF22	RUF22	GCN20	P43535	752 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	BRR6	P53062	197 aa		0.8	□□□□□ -2.28
RUF22	RUF22	TOS8	P53147	276 aa		0.8	□□□□□ -2.28
RUF22	RUF22	CDC123	Q05791	360 aa		0.8	□□□□□ -2.28
RUF22	RUF22	YLR162W	Q06235	118 aa		0.8	□□□□□ -2.28
RUF22	RUF22	MSA1	Q08471	629 aa		0.8	□□□□□ -2.28
RUF22	RUF22	RIO1	Q12196	484 aa	Known RBP	0.8	□□□□□ -2.28
RUF22	RUF22	NCB2	Q92317	146 aa		0.8	□□□□□ -2.28
RUF22	RUF22	THP2	O13539	261 aa	Known RBP	0.79	□□□□□ -2.28
RUF22	RUF22	RHO1	P06780	209 aa	Known RBP	0.79	□□□□□ -2.28
RUF22	RUF22	YBR121C-A	P0C5L4	52 aa		0.79	□□□□□ -2.28
RUF22	RUF22	NHP6B	P11633	99 aa	Known RBP	0.79	□□□□□ -2.28
RUF22	RUF22	MRPS28	P21771	286 aa		0.79	□□□□□ -2.28
RUF22	RUF22	MRPL28	P36527	147 aa		0.79	□□□□□ -2.28
RUF22	RUF22	RTR1	P40084	226 aa	Predicted RBP	0.79	□□□□□ -2.28
RUF22	RUF22	PGD1	P40356	397 aa		0.79	□□□□□ -2.28
RUF22	RUF22	ICE2	P40499	491 aa		0.79	□□□□□ -2.28
RUF22	RUF22	RPL33B	P41056	107 aa	Known RBP	0.79	□□□□□ -2.28
RUF22	RUF22	OTU1	P43558	301 aa		0.79	□□□□□ -2.28
RUF22	RUF22	FAR7	P43592	221 aa		0.79	□□□□□ -2.28
RUF22	RUF22	BXI1	P48558	297 aa		0.79	□□□□□ -2.28
RUF22	RUF22	AIF1	P52923	378 aa		0.79	□□□□□ -2.28
RUF22	RUF22	YNL010W	P53981	241 aa	Known RBP	0.79	□□□□□ -2.28
RUF22	RUF22	SNZ1	Q03148	297 aa		0.79	□□□□□ -2.28
RUF22	RUF22	YDR248C	Q03786	193 aa		0.79	□□□□□ -2.28
RUF22	RUF22	LPP1	Q04396	274 aa		0.79	□□□□□ -2.28
RUF22	RUF22	JLP1	Q12358	412 aa		0.79	□□□□□ -2.28
RUF22	RUF22	PSF1	Q12488	208 aa		0.79	□□□□□ -2.28
RUF22	RUF22	TSC3	Q3E790	80 aa		0.79	□□□□□ -2.28
RUF22	RUF22	SEY1	Q99287	776 aa		0.79	□□□□□ -2.28
RUF22	RUF22	FLO9	P39712	1322 aa		0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms