RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W GEP5Q12393 293 aa2.08□□□□□ -2.08
MRPL40YPL173W MRX4Q12467 430 aa2.08□□□□□ -2.08
MRPL40YPL173W SIR4P11978 1358 aa2.08□□□□□ -2.08
MRPL40YPL173W RAD10P06838 210 aa2.07□□□□□ -2.08
MRPL40YPL173W STE18P18852 110 aa2.07□□□□□ -2.08
MRPL40YPL173W RNP1P32385 249 aa2.07□□□□□ -2.08
MRPL40YPL173W PRX1P34227 261 aaKnown RBP2.07□□□□□ -2.08
MRPL40YPL173W SRY1P36007 326 aa2.07□□□□□ -2.08
MRPL40YPL173W YMR144WP40214 342 aaKnown RBP2.07□□□□□ -2.08
MRPL40YPL173W PIR5P46999 287 aa2.07□□□□□ -2.08
MRPL40YPL173W NSA1P53136 463 aaPredicted RBP2.07□□□□□ -2.08
MRPL40YPL173W PST1Q12355 444 aa2.07□□□□□ -2.08
MRPL40YPL173W DCN1Q12395 269 aa2.07□□□□□ -2.08
MRPL40YPL173W YLR462WO13556 202 aa2.06□□□□□ -2.08
MRPL40YPL173W MET2P08465 486 aa2.06□□□□□ -2.08
MRPL40YPL173W MSA2P36157 363 aa2.06□□□□□ -2.08
MRPL40YPL173W SSH1P38353 490 aaKnown RBP2.06□□□□□ -2.08
MRPL40YPL173W YEL075CP39972 122 aa2.06□□□□□ -2.08
MRPL40YPL173W SPO73P40031 143 aa2.06□□□□□ -2.08
MRPL40YPL173W PEX17P40155 199 aa2.06□□□□□ -2.08
MRPL40YPL173W BUD13P46947 266 aaPredicted RBP2.06□□□□□ -2.08
MRPL40YPL173W YGL159WP53110 370 aa2.06□□□□□ -2.08
MRPL40YPL173W CAB4P53332 305 aa2.06□□□□□ -2.08
MRPL40YPL173W CUS2P53830 285 aaPredicted RBP2.06□□□□□ -2.08
MRPL40YPL173W YPR172WQ06608 200 aa2.06□□□□□ -2.08
MRPL40YPL173W FEX1Q08913 375 aa2.06□□□□□ -2.08
MRPL40YPL173W FEX2Q08991 375 aa2.06□□□□□ -2.08
MRPL40YPL173W PRM7Q12459 698 aa2.06□□□□□ -2.08
MRPL40YPL173W KRE1P17260 313 aa2.05□□□□□ -2.08
MRPL40YPL173W SSO1P32867 290 aa2.05□□□□□ -2.08
MRPL40YPL173W SDH4P37298 181 aa2.05□□□□□ -2.08
MRPL40YPL173W HAM1P47119 197 aaKnown RBP2.05□□□□□ -2.08
MRPL40YPL173W ADO1P47143 340 aaKnown RBP2.05□□□□□ -2.08
MRPL40YPL173W SYF2P53277 215 aaPredicted RBP2.05□□□□□ -2.08
MRPL40YPL173W FAR8Q05040 523 aa2.05□□□□□ -2.08
MRPL40YPL173W YLR030WQ07967 263 aa2.05□□□□□ -2.08
MRPL40YPL173W SLD7Q08457 257 aa2.05□□□□□ -2.08
MRPL40YPL173W YCL012CQ8J0M4 134 aa2.05□□□□□ -2.08
MRPL40YPL173W URA6P15700 204 aa2.04□□□□□ -2.08
MRPL40YPL173W ERG24P32462 438 aaKnown RBP2.04□□□□□ -2.08
MRPL40YPL173W RCN1P36054 211 aa2.04□□□□□ -2.08
MRPL40YPL173W CAT5P41735 233 aa2.04□□□□□ -2.08
MRPL40YPL173W RPA43P46669 326 aa2.04□□□□□ -2.08
MRPL40YPL173W GON7P46984 123 aa2.04□□□□□ -2.08
MRPL40YPL173W NUP57P48837 541 aa2.04□□□□□ -2.08
MRPL40YPL173W BRR6P53062 197 aa2.04□□□□□ -2.08
MRPL40YPL173W CGR1P53188 120 aa2.04□□□□□ -2.08
MRPL40YPL173W YDR114CQ04597 100 aa2.04□□□□□ -2.08
MRPL40YPL173W INM2Q05533 292 aa2.04□□□□□ -2.08
MRPL40YPL173W SSQ1Q05931 657 aaPredicted RBP2.04□□□□□ -2.08
MRPL40YPL173W RPL28P02406 149 aaKnown RBP2.03□□□□□ -2.08
MRPL40YPL173W DPM1P14020 267 aaKnown RBP2.03□□□□□ -2.08
MRPL40YPL173W RFA3P26755 122 aaKnown RBP2.03□□□□□ -2.08
MRPL40YPL173W ERV29P53337 310 aa2.03□□□□□ -2.08
MRPL40YPL173W FYV6P53913 173 aa2.03□□□□□ -2.08
MRPL40YPL173W HEM25Q07534 307 aa2.03□□□□□ -2.08
MRPL40YPL173W NIP7Q08962 181 aaKnown RBP2.03□□□□□ -2.08
MRPL40YPL173W GET4Q12125 312 aa2.03□□□□□ -2.08
MRPL40YPL173W JLP1Q12358 412 aa2.03□□□□□ -2.08
MRPL40YPL173W TUS1Q06412 1307 aa2.02□□□□□ -2.09
MRPL40YPL173W COX5AP00424 153 aa2.02□□□□□ -2.09
MRPL40YPL173W CDC28P00546 298 aaKnown RBP2.02□□□□□ -2.09
MRPL40YPL173W DBF2P22204 572 aa2.02□□□□□ -2.09
MRPL40YPL173W RSA4P25382 515 aaKnown RBP2.02□□□□□ -2.09
MRPL40YPL173W MIG1P27705 504 aa2.02□□□□□ -2.09
MRPL40YPL173W MGM101P32787 269 aaKnown RBP2.02□□□□□ -2.09
MRPL40YPL173W COS8P38723 381 aa2.02□□□□□ -2.09
MRPL40YPL173W IKI1P38874 309 aa2.02□□□□□ -2.09
MRPL40YPL173W RFC4P40339 323 aaKnown RBP2.02□□□□□ -2.09
MRPL40YPL173W SMD3P43321 101 aaKnown RBP2.02□□□□□ -2.09
MRPL40YPL173W OST2P46964 130 aa2.02□□□□□ -2.09
MRPL40YPL173W YGL088WP53151 121 aa2.02□□□□□ -2.09
MRPL40YPL173W GTR2P53290 341 aa2.02□□□□□ -2.09
MRPL40YPL173W SSU72P53538 206 aaPredicted RBP2.02□□□□□ -2.09
MRPL40YPL173W BBP1Q12365 385 aa2.02□□□□□ -2.09
MRPL40YPL173W CHD1P32657 1468 aa2.01□□□□□ -2.09
MRPL40YPL173W IPP1P00817 287 aaKnown RBP2.01□□□□□ -2.09
MRPL40YPL173W HTB1P02293 131 aaKnown RBP2.01□□□□□ -2.09
MRPL40YPL173W HTB2P02294 131 aa2.01□□□□□ -2.09
MRPL40YPL173W MATALPHA2P0CY08 210 aa2.01□□□□□ -2.09
MRPL40YPL173W HMLALPHA2P0CY09 210 aa2.01□□□□□ -2.09
MRPL40YPL173W YPK2P18961 677 aa2.01□□□□□ -2.09
MRPL40YPL173W APA2P22108 325 aa2.01□□□□□ -2.09
MRPL40YPL173W OAC1P32332 324 aa2.01□□□□□ -2.09
MRPL40YPL173W YPT52P36018 234 aaKnown RBP2.01□□□□□ -2.09
MRPL40YPL173W RPF1P38805 295 aaKnown RBP2.01□□□□□ -2.09
MRPL40YPL173W CTR2P38865 189 aa2.01□□□□□ -2.09
MRPL40YPL173W TIF34P40217 347 aaKnown RBP2.01□□□□□ -2.09
MRPL40YPL173W YJL144WP47009 104 aa2.01□□□□□ -2.09
MRPL40YPL173W YJR141WP47172 347 aaPredicted RBP2.01□□□□□ -2.09
MRPL40YPL173W HTL1Q9URQ5 78 aa2.01□□□□□ -2.09
MRPL40YPL173W DSF1P0CX08 502 aa2□□□□□ -2.09
MRPL40YPL173W YNR073CP0CX09 502 aa2□□□□□ -2.09
MRPL40YPL173W CBF1P17106 351 aa2□□□□□ -2.09
MRPL40YPL173W IDH1P28834 360 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
MRPL40YPL173W YGP1P38616 354 aaKnown RBP2□□□□□ -2.09
MRPL40YPL173W COG3P40094 801 aa2□□□□□ -2.09
MRPL40YPL173W IRC18P47056 224 aa2□□□□□ -2.09
MRPL40YPL173W YJL016WP47072 561 aa2□□□□□ -2.09
MRPL40YPL173W ILM1P47155 203 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms