RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C TAZ1Q06510 381 aa3.48□□□□□ -1.85
SNF8YPL002C CSI2Q08054 341 aa3.48□□□□□ -1.85
SNF8YPL002C THP3Q12049 470 aaKnown RBP3.48□□□□□ -1.85
SNF8YPL002C JLP1Q12358 412 aa3.48□□□□□ -1.85
SNF8YPL002C HTZ1Q12692 134 aaKnown RBP3.48□□□□□ -1.85
SNF8YPL002C ILV5P06168 395 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C KIN28P06242 306 aa3.47□□□□□ -1.85
SNF8YPL002C PDE2P06776 526 aa3.47□□□□□ -1.85
SNF8YPL002C PEP4P07267 405 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C PUT2P07275 575 aa3.47□□□□□ -1.85
SNF8YPL002C DFR1P07807 211 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SNF8YPL002C PET122P10355 254 aa3.47□□□□□ -1.85
SNF8YPL002C SPO7P18410 259 aa3.47□□□□□ -1.85
SNF8YPL002C EXG1P23776 448 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C RPL24BP24000 155 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C YCR101CP25607 182 aa3.47□□□□□ -1.85
SNF8YPL002C PPA2P28239 310 aa3.47□□□□□ -1.85
SNF8YPL002C PRP21P32524 280 aaPredicted RBP3.47□□□□□ -1.85
SNF8YPL002C SRO77P38163 1010 aa3.47□□□□□ -1.85
SNF8YPL002C ICS2P38284 255 aa3.47□□□□□ -1.85
SNF8YPL002C TSC10P38342 320 aa3.47□□□□□ -1.85
SNF8YPL002C CIN4P39110 191 aa3.47□□□□□ -1.85
SNF8YPL002C HXT9P40885 567 aa3.47□□□□□ -1.85
SNF8YPL002C CDC40P40968 455 aaPredicted RBP3.47□□□□□ -1.85
SNF8YPL002C ILM1P47155 203 aa3.47□□□□□ -1.85
SNF8YPL002C DIA3P52290 468 aa3.47□□□□□ -1.85
SNF8YPL002C YGL185CP53100 379 aa3.47□□□□□ -1.85
SNF8YPL002C MTM1P53320 366 aa3.47□□□□□ -1.85
SNF8YPL002C CWC25P53854 179 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C HXT11P54862 567 aa3.47□□□□□ -1.85
SNF8YPL002C CTL1Q03220 320 aaKnown RBP3.47□□□□□ -1.85
SNF8YPL002C SCS7Q03529 384 aa3.47□□□□□ -1.85
SNF8YPL002C YMD8Q03697 442 aa3.47□□□□□ -1.85
SNF8YPL002C RRG8Q06109 277 aa3.47□□□□□ -1.85
SNF8YPL002C YLR108CQ12259 485 aa3.47□□□□□ -1.85
SNF8YPL002C RPN6Q12377 434 aa3.47□□□□□ -1.85
SNF8YPL002C ATG31Q12421 196 aa3.47□□□□□ -1.85
SNF8YPL002C YCL001W-BQ96VH2 84 aa3.47□□□□□ -1.85
SNF8YPL002C FSH3Q99369 266 aa3.47□□□□□ -1.85
SNF8YPL002C MDN1Q12019 4910 aaKnown RBP3.46□□□□□ -1.85
SNF8YPL002C SCEIP03882 235 aa3.46□□□□□ -1.86
SNF8YPL002C CHO1P08456 276 aa3.46□□□□□ -1.86
SNF8YPL002C YML003WP0CF16 290 aa3.46□□□□□ -1.86
SNF8YPL002C RPS23AP0CX29 145 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C RPS23BP0CX30 145 aa3.46□□□□□ -1.86
SNF8YPL002C RPS8AP0CX39 200 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C RPS8BP0CX40 200 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C RPS16AP0CX51 143 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C RPS16BP0CX52 143 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C VMA16P23968 213 aa3.46□□□□□ -1.86
SNF8YPL002C RPS5P26783 225 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C PDB1P32473 366 aaKnown RBP3.46□□□□□ -1.86
SNF8YPL002C TCA17P32613 152 aa3.46□□□□□ -1.86
SNF8YPL002C CLB6P32943 380 aa3.46□□□□□ -1.86
SNF8YPL002C PTC1P35182 281 aa3.46□□□□□ -1.86
SNF8YPL002C GPX1P36014 167 aa3.46□□□□□ -1.86
SNF8YPL002C FZO1P38297 855 aa3.46□□□□□ -1.86
SNF8YPL002C MLH1P38920 769 aa3.46□□□□□ -1.86
SNF8YPL002C KRE9P39005 276 aa3.46□□□□□ -1.86
SNF8YPL002C RGI1P40043 161 aaPredicted RBP3.46□□□□□ -1.86
SNF8YPL002C HPM1P40481 377 aa3.46□□□□□ -1.86
SNF8YPL002C HIT1P46973 164 aa3.46□□□□□ -1.86
SNF8YPL002C DPB11P47027 764 aaPredicted RBP3.46□□□□□ -1.86
SNF8YPL002C ECM27P47144 725 aa3.46□□□□□ -1.86
SNF8YPL002C YGL114WP53134 725 aa3.46□□□□□ -1.86
SNF8YPL002C YDR248CQ03786 193 aa3.46□□□□□ -1.86
SNF8YPL002C RUB1Q03919 77 aa3.46□□□□□ -1.86
SNF8YPL002C YOL131WQ08270 108 aa3.46□□□□□ -1.86
SNF8YPL002C FIT3Q08907 204 aa3.46□□□□□ -1.86
SNF8YPL002C FRE8Q12209 686 aa3.46□□□□□ -1.86
SNF8YPL002C FYV7Q12247 151 aa3.46□□□□□ -1.86
SNF8YPL002C FMP16Q12497 93 aa3.46□□□□□ -1.86
SNF8YPL002C WIP1Q2V2P8 89 aa3.46□□□□□ -1.86
SNF8YPL002C YJR112W-AQ3E743 109 aa3.46□□□□□ -1.86
SNF8YPL002C NHP6AP11632 93 aaKnown RBP3.45□□□□□ -1.86
SNF8YPL002C SAR1P20606 190 aaKnown RBP3.45□□□□□ -1.86
SNF8YPL002C RPS1BP23248 255 aaKnown RBP3.45□□□□□ -1.86
SNF8YPL002C BUD23P25627 275 aaPredicted RBP3.45□□□□□ -1.86
SNF8YPL002C CSM1P25651 190 aa3.45□□□□□ -1.86
SNF8YPL002C CAM1P29547 415 aaKnown RBP3.45□□□□□ -1.86
SNF8YPL002C SNC1P31109 117 aa3.45□□□□□ -1.86
SNF8YPL002C MRP20P32387 263 aa3.45□□□□□ -1.86
SNF8YPL002C THI2P38141 450 aa3.45□□□□□ -1.86
SNF8YPL002C SLM4P38247 162 aa3.45□□□□□ -1.86
SNF8YPL002C KRE29P40026 464 aa3.45□□□□□ -1.86
SNF8YPL002C YDL186WP48568 277 aa3.45□□□□□ -1.86
SNF8YPL002C VOA1P53262 265 aa3.45□□□□□ -1.86
SNF8YPL002C COS1P53822 381 aa3.45□□□□□ -1.86
SNF8YPL002C YNL234WP53857 426 aa3.45□□□□□ -1.86
SNF8YPL002C YNL046WP53956 172 aa3.45□□□□□ -1.86
SNF8YPL002C GMC1Q04399 608 aa3.45□□□□□ -1.86
SNF8YPL002C ADH6Q04894 360 aaKnown RBP3.45□□□□□ -1.86
SNF8YPL002C UIP4Q08926 304 aa3.45□□□□□ -1.86
SNF8YPL002C BTS1Q12051 335 aa3.45□□□□□ -1.86
SNF8YPL002C RLM1Q12224 676 aa3.45□□□□□ -1.86
SNF8YPL002C SFM1Q12314 213 aa3.45□□□□□ -1.86
SNF8YPL002C IES3Q12345 250 aa3.45□□□□□ -1.86
SNF8YPL002C DCP1Q12517 231 aaPredicted RBP3.45□□□□□ -1.86
SNF8YPL002C YLR302CO13544 120 aa3.44□□□□□ -1.86
SNF8YPL002C MF(ALPHA)1P01149 165 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms