RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W MDH1P17505 334 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
RCL1YOL010W RPB8P20436 146 aa3.92□□□□□ -1.78
RCL1YOL010W CAM1P29547 415 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W TCA17P32613 152 aa3.92□□□□□ -1.78
RCL1YOL010W REC104P33323 182 aa3.92□□□□□ -1.78
RCL1YOL010W YOX1P34161 385 aa3.92□□□□□ -1.78
RCL1YOL010W ADH5P38113 351 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W MAM33P40513 266 aa3.92□□□□□ -1.78
RCL1YOL010W CAF16P43569 289 aa3.92□□□□□ -1.78
RCL1YOL010W IMD3P50095 523 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W TIM21P53220 239 aa3.92□□□□□ -1.78
RCL1YOL010W SYF2P53277 215 aaPredicted RBP3.92□□□□□ -1.78
RCL1YOL010W SMM1P53720 384 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W CWC25P53854 179 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W YDR514CQ04408 483 aa3.92□□□□□ -1.78
RCL1YOL010W SEC13Q04491 297 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W SSK1Q07084 712 aa3.92□□□□□ -1.78
RCL1YOL010W MIM1Q08176 113 aa3.92□□□□□ -1.78
RCL1YOL010W SKI7Q08491 747 aaPredicted RBP3.92□□□□□ -1.78
RCL1YOL010W YOL114CQ12322 202 aa3.92□□□□□ -1.78
RCL1YOL010W SNU23Q12368 194 aaPredicted RBP3.92□□□□□ -1.78
RCL1YOL010W YDL007C-AQ2V2Q0 85 aa3.92□□□□□ -1.78
RCL1YOL010W YOL159C-AQ3E769 90 aa3.92□□□□□ -1.78
RCL1YOL010W YHR214C-EQ8TGK0 99 aa3.92□□□□□ -1.78
RCL1YOL010W GCN4P03069 281 aa3.91□□□□□ -1.78
RCL1YOL010W SCEIP03882 235 aa3.91□□□□□ -1.78
RCL1YOL010W MSW1P04803 379 aa3.91□□□□□ -1.78
RCL1YOL010W ILV5P06168 395 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W YOL162WP0CF19 215 aa3.91□□□□□ -1.78
RCL1YOL010W URE2P23202 354 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W RHB1P25378 209 aa3.91□□□□□ -1.78
RCL1YOL010W YCR100CP25606 316 aa3.91□□□□□ -1.78
RCL1YOL010W SRO77P38163 1010 aa3.91□□□□□ -1.78
RCL1YOL010W AME1P38313 324 aa3.91□□□□□ -1.78
RCL1YOL010W RPS20P38701 121 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W CTR2P38865 189 aa3.91□□□□□ -1.78
RCL1YOL010W DIM1P41819 318 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W AGP3P43548 558 aa3.91□□□□□ -1.78
RCL1YOL010W IRC7P43623 340 aa3.91□□□□□ -1.78
RCL1YOL010W BRR6P53062 197 aa3.91□□□□□ -1.78
RCL1YOL010W SPR6Q01684 191 aa3.91□□□□□ -1.78
RCL1YOL010W YPL077CQ02831 240 aa3.91□□□□□ -1.78
RCL1YOL010W YDR248CQ03786 193 aa3.91□□□□□ -1.78
RCL1YOL010W CTS2Q06350 511 aa3.91□□□□□ -1.78
RCL1YOL010W ASA1Q06822 443 aa3.91□□□□□ -1.78
RCL1YOL010W PRP11Q07350 266 aaPredicted RBP3.91□□□□□ -1.78
RCL1YOL010W SDO1Q07953 250 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W NGL1Q08213 363 aaKnown RBP3.91□□□□□ -1.78
RCL1YOL010W FCY22Q12119 530 aa3.91□□□□□ -1.78
RCL1YOL010W VAM3Q12241 283 aa3.91□□□□□ -1.78
RCL1YOL010W ISN1Q99312 450 aa3.91□□□□□ -1.78
RCL1YOL010W QCR2P07257 368 aa3.9□□□□□ -1.79
RCL1YOL010W RPL27AP0C2H6 136 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W RPL27BP0C2H7 136 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W DPM1P14020 267 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W CDC23P16522 626 aa3.9□□□□□ -1.79
RCL1YOL010W SNF6P18888 332 aa3.9□□□□□ -1.79
RCL1YOL010W OLE1P21147 510 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W RNA15P25299 296 aaPredicted RBP3.9□□□□□ -1.79
RCL1YOL010W BUD5P25300 642 aaPredicted RBP3.9□□□□□ -1.79
RCL1YOL010W CPR4P25334 318 aa3.9□□□□□ -1.79
RCL1YOL010W PRE4P30657 266 aa3.9□□□□□ -1.79
RCL1YOL010W ARO4P32449 370 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W GSH1P32477 678 aa3.9□□□□□ -1.79
RCL1YOL010W GSP1P32835 219 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W GSP2P32836 220 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W SPC34P36131 295 aa3.9□□□□□ -1.79
RCL1YOL010W YCR041WP37265 110 aa3.9□□□□□ -1.79
RCL1YOL010W SBE22P38814 852 aa3.9□□□□□ -1.79
RCL1YOL010W MLH1P38920 769 aa3.9□□□□□ -1.79
RCL1YOL010W FMC1P40491 155 aa3.9□□□□□ -1.79
RCL1YOL010W FAR7P43592 221 aa3.9□□□□□ -1.79
RCL1YOL010W PUS4P48567 403 aaKnown RBP3.9□□□□□ -1.79
RCL1YOL010W YGL159WP53110 370 aa3.9□□□□□ -1.79
RCL1YOL010W SLD3P53135 668 aa3.9□□□□□ -1.79
RCL1YOL010W VOA1P53262 265 aa3.9□□□□□ -1.79
RCL1YOL010W CTF19Q02732 369 aa3.9□□□□□ -1.79
RCL1YOL010W PET191Q02772 108 aa3.9□□□□□ -1.79
RCL1YOL010W YDC1Q02896 317 aa3.9□□□□□ -1.79
RCL1YOL010W YDR387CQ04162 555 aa3.9□□□□□ -1.79
RCL1YOL010W RFU1Q08003 200 aa3.9□□□□□ -1.79
RCL1YOL010W HRT1Q08273 121 aa3.9□□□□□ -1.79
RCL1YOL010W INP53Q12271 1107 aa3.9□□□□□ -1.79
RCL1YOL010W YML003WP0CF16 290 aa3.89□□□□□ -1.79
RCL1YOL010W NHP6AP11632 93 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W FUN26P31381 517 aa3.89□□□□□ -1.79
RCL1YOL010W APE2P32454 952 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W MTC7P32633 139 aa3.89□□□□□ -1.79
RCL1YOL010W AST1P35183 429 aa3.89□□□□□ -1.79
RCL1YOL010W ELF1P36053 145 aa3.89□□□□□ -1.79
RCL1YOL010W PDX3P38075 228 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W YBR096WP38256 230 aa3.89□□□□□ -1.79
RCL1YOL010W VBA2P38358 474 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W ALP1P38971 573 aa3.89□□□□□ -1.79
RCL1YOL010W ISC1P40015 477 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W DDI1P40087 428 aa3.89□□□□□ -1.79
RCL1YOL010W SGN1P40561 250 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
RCL1YOL010W YJR096WP47137 282 aa3.89□□□□□ -1.79
RCL1YOL010W YJR111CP47148 283 aaKnown RBP3.89□□□□□ -1.79
RCL1YOL010W YNR064CP53750 290 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms