RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	SRB7	P47822	140 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	UBP8	P50102	471 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	MIX14	Q04341	121 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	YOR376W	Q08900	122 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	NIP7	Q08962	181 aa	Known RBP	4.6	□□□□□ -1.67
RPA49	YNL248C	FRE7	Q12333	620 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	TFC7	Q12415	435 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	YLR146W-A	Q2V2P1	62 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	YHR214C-E	Q8TGK0	99 aa		4.6	□□□□□ -1.67
RPA49	YNL248C	YLR358C	O13565	187 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	COX1	P00401	534 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	TPI1	P00942	248 aa	Known RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	CDC36	P06100	191 aa	Predicted RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	ZRC1	P20107	442 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	SEC22	P22214	214 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	SCO1	P23833	295 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	AFG1	P32317	509 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	ARO4	P32449	370 aa	Known RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	VAM7	P32912	316 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	UTH1	P36135	365 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	OM14	P38325	134 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	ASP1	P38986	381 aa	Predicted RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	GNA1	P43577	159 aa	Predicted RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	YJR011C	P47086	261 aa	Predicted RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	MCM22	P47167	239 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	SNN1	P48232	102 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	AVT4	P50944	713 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	PHO23	P50947	330 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	YGL159W	P53110	370 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	PKP2	P53170	491 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	PNC1	P53184	216 aa	Known RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	MRPL22	P53881	309 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	INN1	P53901	409 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	SMX3	P54999	86 aa	Predicted RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	GIS1	Q03833	894 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	VBA4	Q04602	768 aa	Known RBP	4.59	□□□□□ -1.67
RPA49	YNL248C	RRT7	Q07829	113 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	MCH4	Q08268	501 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	SCP1	Q08873	200 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	VAM3	Q12241	283 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	MCT1	Q12283	360 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	YHR213W-A	Q8TGT4	77 aa		4.59	□□□□□ -1.67
RPA49	YNL248C	MES1	P00958	751 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	YPT1	P01123	206 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	ERG8	P24521	451 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	IFM1	P25038	676 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	CBT1	P36038	271 aa	Predicted RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	YPC1	P38298	316 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	LAG1	P38703	411 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	DUG1	P43616	481 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	PGU1	P47180	361 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	BUL1	P48524	976 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	NIF3	P53081	288 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	YGL117W	P53133	265 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	PBP1	P53297	722 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	NRM1	P53718	249 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	YNR048W	P53740	393 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	ACT1	P60010	375 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	RSM23	Q01163	450 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	SDC1	Q03323	175 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	NUP53	Q03790	475 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	RTT103	Q05543	409 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	SYM1	Q06563	197 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	BER1	Q06688	274 aa	Known RBP	4.58	□□□□□ -1.68
RPA49	YNL248C	AKR2	Q12013	749 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	TGS1	Q12052	315 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	UBA3	Q99344	299 aa		4.58	□□□□□ -1.68
RPA49	YNL248C	COX5B	P00425	151 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	YFR010W-A	P0C5N0	62 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	UBI4	P0CG63	381 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	RPL40A	P0CH08	128 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	RPL40B	P0CH09	128 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	HEM13	P11353	328 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	RFA1	P22336	621 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	PCL1	P24867	279 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	RPD3	P32561	433 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	EMP24	P32803	203 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	SOF1	P33750	489 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	EMC5	P40540	141 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	CTK2	P46962	323 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	UFD1	P53044	361 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	SRP1	Q02821	542 aa	Known RBP	4.57	□□□□□ -1.68
RPA49	YNL248C	GRC3	Q07845	632 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	ATP16	Q12165	160 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	MED4	Q12343	284 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	ISA2	Q12425	185 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	YIL046W-A	Q3E7Z4	54 aa		4.57	□□□□□ -1.68
RPA49	YNL248C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RPA49	YNL248C	RPS16A	P0CX51	143 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	RPS16B	P0CX52	143 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	MRP2	P10663	115 aa	Predicted RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	RPL30	P14120	105 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	MDH2	P22133	377 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	CNB1	P25296	175 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	SED4	P25365	1065 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	CPR3	P25719	182 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	LDS1	P31379	325 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	FLO10	P36170	1169 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	FIG1	P38224	298 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	YND1	P40009	630 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 125.8 ms