RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W VCX1Q99385 411 aa4.74□□□□□ -1.65
LST8YNL006W YEL009C-AA0A023PZF2 135 aa4.73□□□□□ -1.65
LST8YNL006W RPL6BP05739 176 aaKnown RBP4.73□□□□□ -1.65
LST8YNL006W MRP1P10662 321 aaKnown RBP4.73□□□□□ -1.65
LST8YNL006W RPL30P14120 105 aaKnown RBP4.73□□□□□ -1.65
LST8YNL006W SAG1P20840 650 aa4.73□□□□□ -1.65
LST8YNL006W AFG1P32317 509 aa4.73□□□□□ -1.65
LST8YNL006W REC114P32841 428 aa4.73□□□□□ -1.65
LST8YNL006W TCM62P38228 572 aaKnown RBP4.73□□□□□ -1.65
LST8YNL006W SSH1P38353 490 aaKnown RBP4.73□□□□□ -1.65
LST8YNL006W GOS1P38736 223 aa4.73□□□□□ -1.65
LST8YNL006W ARO9P38840 513 aaPredicted RBP4.73□□□□□ -1.65
LST8YNL006W YND1P40009 630 aa4.73□□□□□ -1.65
LST8YNL006W DLS1P40366 167 aa4.73□□□□□ -1.65
LST8YNL006W YGL159WP53110 370 aa4.73□□□□□ -1.65
LST8YNL006W MTL1P53214 551 aa4.73□□□□□ -1.65
LST8YNL006W YNR048WP53740 393 aa4.73□□□□□ -1.65
LST8YNL006W APJ1P53940 528 aa4.73□□□□□ -1.65
LST8YNL006W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
LST8YNL006W YDC1Q02896 317 aa4.73□□□□□ -1.65
LST8YNL006W GPI17Q04080 534 aa4.73□□□□□ -1.65
LST8YNL006W YOR029WQ12243 111 aa4.73□□□□□ -1.65
LST8YNL006W POM34Q12445 299 aa4.73□□□□□ -1.65
LST8YNL006W SIR2P06700 562 aa4.72□□□□□ -1.65
LST8YNL006W NAM2P11325 894 aa4.72□□□□□ -1.65
LST8YNL006W HNM1P19807 563 aa4.72□□□□□ -1.65
LST8YNL006W PRE7P23724 241 aaKnown RBP4.72□□□□□ -1.65
LST8YNL006W RPS5P26783 225 aaKnown RBP4.72□□□□□ -1.65
LST8YNL006W CNE1P27825 502 aa4.72□□□□□ -1.65
LST8YNL006W PRE4P30657 266 aa4.72□□□□□ -1.65
LST8YNL006W ERG24P32462 438 aaKnown RBP4.72□□□□□ -1.65
LST8YNL006W MTH1P35198 433 aa4.72□□□□□ -1.65
LST8YNL006W ARC40P38328 384 aaKnown RBP4.72□□□□□ -1.65
LST8YNL006W GET2P40056 285 aa4.72□□□□□ -1.65
LST8YNL006W YJL218WP40892 196 aaKnown RBP4.72□□□□□ -1.65
LST8YNL006W ERJ5P43613 295 aaPredicted RBP4.72□□□□□ -1.65
LST8YNL006W SBH2P52871 88 aa4.72□□□□□ -1.65
LST8YNL006W NRK1P53915 240 aa4.72□□□□□ -1.65
LST8YNL006W YNL046WP53956 172 aa4.72□□□□□ -1.65
LST8YNL006W NEJ1Q06148 342 aa4.72□□□□□ -1.65
LST8YNL006W CSI2Q08054 341 aa4.72□□□□□ -1.65
LST8YNL006W HUT1Q12520 339 aa4.72□□□□□ -1.65
LST8YNL006W REP1P03871 373 aa4.71□□□□□ -1.66
LST8YNL006W REP2P03872 296 aa4.71□□□□□ -1.66
LST8YNL006W COX9P07255 59 aa4.71□□□□□ -1.66
LST8YNL006W YML003WP0CF16 290 aa4.71□□□□□ -1.66
LST8YNL006W OLE1P21147 510 aaKnown RBP4.71□□□□□ -1.66
LST8YNL006W VPS17P32913 551 aa4.71□□□□□ -1.66
LST8YNL006W CDS1P38221 457 aa4.71□□□□□ -1.66
LST8YNL006W YER079WP40052 210 aaKnown RBP4.71□□□□□ -1.66
LST8YNL006W DOC1P53068 250 aa4.71□□□□□ -1.66
LST8YNL006W IMO32P53219 342 aa4.71□□□□□ -1.66
LST8YNL006W YNR071CP53757 342 aa4.71□□□□□ -1.66
LST8YNL006W BUD25P85052 153 aa4.71□□□□□ -1.66
LST8YNL006W CAC2Q04199 468 aa4.71□□□□□ -1.66
LST8YNL006W YPR098CQ06089 161 aa4.71□□□□□ -1.66
LST8YNL006W FRE3Q08905 711 aa4.71□□□□□ -1.66
LST8YNL006W ORT1Q12375 292 aa4.71□□□□□ -1.66
LST8YNL006W RPL24BP24000 155 aaKnown RBP4.7□□□□□ -1.66
LST8YNL006W ERG3P32353 365 aa4.7□□□□□ -1.66
LST8YNL006W VMA6P32366 345 aaKnown RBP4.7□□□□□ -1.66
LST8YNL006W DOA4P32571 926 aa4.7□□□□□ -1.66
LST8YNL006W PAU2P32612 120 aa4.7□□□□□ -1.66
LST8YNL006W VMA11P32842 164 aa4.7□□□□□ -1.66
LST8YNL006W PPZ2P33329 710 aa4.7□□□□□ -1.66
LST8YNL006W YOX1P34161 385 aa4.7□□□□□ -1.66
LST8YNL006W RMD6P39975 231 aa4.7□□□□□ -1.66
LST8YNL006W PCL6P40038 420 aa4.7□□□□□ -1.66
LST8YNL006W SLM1P40485 686 aa4.7□□□□□ -1.66
LST8YNL006W GON7P46984 123 aa4.7□□□□□ -1.66
LST8YNL006W AVT4P50944 713 aa4.7□□□□□ -1.66
LST8YNL006W PMT5P52867 743 aa4.7□□□□□ -1.66
LST8YNL006W YGL204CP53089 101 aa4.7□□□□□ -1.66
LST8YNL006W NSA1P53136 463 aaPredicted RBP4.7□□□□□ -1.66
LST8YNL006W YKR005CQ02203 525 aa4.7□□□□□ -1.66
LST8YNL006W GMC1Q04399 608 aa4.7□□□□□ -1.66
LST8YNL006W YLR283WQ05867 314 aa4.7□□□□□ -1.66
LST8YNL006W TMA10Q06177 86 aa4.7□□□□□ -1.66
LST8YNL006W RFU1Q08003 200 aa4.7□□□□□ -1.66
LST8YNL006W USB1Q12208 290 aaKnown RBP4.7□□□□□ -1.66
LST8YNL006W MPD1Q12404 318 aaKnown RBP4.7□□□□□ -1.66
LST8YNL006W SPO24Q3E752 67 aa4.7□□□□□ -1.66
LST8YNL006W RPS18AP0CX55 146 aaKnown RBP4.69□□□□□ -1.66
LST8YNL006W RPS18BP0CX56 146 aaPredicted RBP4.69□□□□□ -1.66
LST8YNL006W CKA1P15790 372 aa4.69□□□□□ -1.66
LST8YNL006W ARO4P32449 370 aaKnown RBP4.69□□□□□ -1.66
LST8YNL006W POP2P39008 433 aa4.69□□□□□ -1.66
LST8YNL006W RIO2P40160 425 aaKnown RBP4.69□□□□□ -1.66
LST8YNL006W YAE1P47118 141 aaPredicted RBP4.69□□□□□ -1.66
LST8YNL006W POP6P53218 158 aa4.69□□□□□ -1.66
LST8YNL006W TMA20P89886 181 aaPredicted RBP4.69□□□□□ -1.66
LST8YNL006W YDR248CQ03786 193 aa4.69□□□□□ -1.66
LST8YNL006W YDR179W-AQ03983 463 aa4.69□□□□□ -1.66
LST8YNL006W UTP15Q04305 513 aaKnown RBP4.69□□□□□ -1.66
LST8YNL006W RGC1Q06108 1083 aaKnown RBP4.69□□□□□ -1.66
LST8YNL006W EAF3Q12432 401 aa4.69□□□□□ -1.66
LST8YNL006W URA3P03962 267 aa4.68□□□□□ -1.66
LST8YNL006W TRP4P07285 380 aaPredicted RBP4.68□□□□□ -1.66
LST8YNL006W MATALPHA1P0CY06 175 aa4.68□□□□□ -1.66
LST8YNL006W HMLALPHA1P0CY07 175 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms