RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeastyeast

Gene YPT6, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT6YLR262C BFR1P38934 470 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16 RIP-Chip
YPT6YLR262C BMT5P40493 336 aa1.56□□□□□ -2.16
YPT6YLR262C GTR2P53290 341 aa1.56□□□□□ -2.16
YPT6YLR262C CYT2Q00873 224 aa1.56□□□□□ -2.16
YPT6YLR262C INM2Q05533 292 aa1.56□□□□□ -2.16
YPT6YLR262C KAP95Q06142 861 aaKnown RBP1.56□□□□□ -2.16
YPT6YLR262C YPR172WQ06608 200 aa1.56□□□□□ -2.16
YPT6YLR262C MSA1Q08471 629 aa1.56□□□□□ -2.16
YPT6YLR262C RRP36Q12481 300 aaPredicted RBP1.56□□□□□ -2.16
YPT6YLR262C IPP1P00817 287 aaKnown RBP1.55□□□□□ -2.16
YPT6YLR262C PHO88P38264 188 aaPredicted RBP1.55□□□□□ -2.16
YPT6YLR262C DOG1P38774 246 aa1.55□□□□□ -2.16
YPT6YLR262C FIS1P40515 155 aa1.55□□□□□ -2.16
YPT6YLR262C YNL046WP53956 172 aa1.55□□□□□ -2.16
YPT6YLR262C ATG39Q06159 398 aa1.55□□□□□ -2.16
YPT6YLR262C YCT1Q12235 531 aa1.55□□□□□ -2.16
YPT6YLR262C CDC7P06243 507 aa1.54□□□□□ -2.16
YPT6YLR262C RSR1P13856 272 aa1.54□□□□□ -2.16
YPT6YLR262C MDH3P32419 343 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
YPT6YLR262C YPT52P36018 234 aaKnown RBP1.54□□□□□ -2.16
YPT6YLR262C YHR127WP38833 243 aaKnown RBP1.54□□□□□ -2.16
YPT6YLR262C PRM10P42946 383 aa1.54□□□□□ -2.16
YPT6YLR262C YGR219WP53307 113 aa1.54□□□□□ -2.16
YPT6YLR262C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
YPT6YLR262C YPL257WQ08974 193 aa1.54□□□□□ -2.16
YPT6YLR262C MSH5Q12175 901 aa1.54□□□□□ -2.16
YPT6YLR262C SNU23Q12368 194 aaPredicted RBP1.54□□□□□ -2.16
YPT6YLR262C RPL9AP05738 191 aaKnown RBP1.53□□□□□ -2.16
YPT6YLR262C OAC1P32332 324 aa1.53□□□□□ -2.16
YPT6YLR262C RPT5P33297 434 aaKnown RBP1.53□□□□□ -2.16
YPT6YLR262C YHR022CP38763 256 aa1.53□□□□□ -2.16
YPT6YLR262C BNA6P43619 295 aa1.53□□□□□ -2.16
YPT6YLR262C RPL9BP51401 191 aaKnown RBP1.53□□□□□ -2.16
YPT6YLR262C RRT8Q08219 342 aa1.53□□□□□ -2.16
YPT6YLR262C MSW1P04803 379 aa1.52□□□□□ -2.17
YPT6YLR262C SNA3P14359 133 aa1.52□□□□□ -2.17
YPT6YLR262C RPS5P26783 225 aaKnown RBP1.52□□□□□ -2.17
YPT6YLR262C YHR180WP38868 163 aa1.52□□□□□ -2.17
YPT6YLR262C YAR068WP39564 161 aa1.52□□□□□ -2.17
YPT6YLR262C YIL001WP40560 513 aa1.52□□□□□ -2.17
YPT6YLR262C RMR1P53060 241 aa1.52□□□□□ -2.17
YPT6YLR262C YNL134CP53912 376 aaKnown RBP1.52□□□□□ -2.17
YPT6YLR262C NIP7Q08962 181 aaKnown RBP1.52□□□□□ -2.17
YPT6YLR262C YLR126CQ12288 251 aa1.52□□□□□ -2.17
YPT6YLR262C YPL229WQ99395 206 aa1.52□□□□□ -2.17
YPT6YLR262C HTL1Q9URQ5 78 aa1.52□□□□□ -2.17
YPT6YLR262C INO80P53115 1489 aa1.51□□□□□ -2.17
YPT6YLR262C ERV15P38312 142 aa1.51□□□□□ -2.17
YPT6YLR262C VTC1P40046 129 aaRIP-Chip data1.51□□□□□ -2.17not detected
YPT6YLR262C YJR079WP47126 109 aa1.51□□□□□ -2.17
YPT6YLR262C ERG25P53045 309 aa1.51□□□□□ -2.17
YPT6YLR262C SEI1Q06058 285 aa1.51□□□□□ -2.17
YPT6YLR262C NEJ1Q06148 342 aa1.51□□□□□ -2.17
YPT6YLR262C CSM4Q08955 156 aa1.51□□□□□ -2.17
YPT6YLR262C GRX2P17695 143 aaKnown RBP1.5□□□□□ -2.17
YPT6YLR262C YKR045CP36138 183 aa1.5□□□□□ -2.17
YPT6YLR262C CAT5P41735 233 aa1.5□□□□□ -2.17
YPT6YLR262C RPA43P46669 326 aa1.5□□□□□ -2.17
YPT6YLR262C YOL162WP0CF19 215 aa1.49□□□□□ -2.17
YPT6YLR262C DDI2P0CH63 225 aa1.49□□□□□ -2.17
YPT6YLR262C DDI3P0CH64 225 aa1.49□□□□□ -2.17
YPT6YLR262C FCY2P17064 533 aa1.49□□□□□ -2.17
YPT6YLR262C YUH1P35127 236 aa1.49□□□□□ -2.17
YPT6YLR262C YBR219CP38317 127 aa1.49□□□□□ -2.17
YPT6YLR262C YMR144WP40214 342 aaKnown RBP1.49□□□□□ -2.17
YPT6YLR262C ARR2Q06597 130 aa1.49□□□□□ -2.17
YPT6YLR262C HEM25Q07534 307 aa1.49□□□□□ -2.17
YPT6YLR262C YHR139C-AO13536 103 aa1.48□□□□□ -2.17
YPT6YLR262C ERD2P18414 219 aa1.48□□□□□ -2.17
YPT6YLR262C MDH2P22133 377 aa1.48□□□□□ -2.17
YPT6YLR262C DSE2P38844 325 aa1.48□□□□□ -2.17
YPT6YLR262C HOC1P47124 396 aa1.48□□□□□ -2.17
YPT6YLR262C ECM33P38248 429 aaKnown RBP1.47□□□□□ -2.17
YPT6YLR262C RPF1P38805 295 aaKnown RBP1.47□□□□□ -2.17
YPT6YLR262C AGE2P40529 298 aa1.47□□□□□ -2.17
YPT6YLR262C YKE4P40544 346 aa1.47□□□□□ -2.17
YPT6YLR262C YJR056CP47115 236 aa1.47□□□□□ -2.17
YPT6YLR262C DCN1Q12395 269 aa1.47□□□□□ -2.17
YPT6YLR262C YOR020W-AQ3E824 90 aa1.47□□□□□ -2.17
YPT6YLR262C YKL075CP36083 450 aa1.46□□□□□ -2.18
YPT6YLR262C GLE2P40066 365 aa1.46□□□□□ -2.18
YPT6YLR262C YER135CP40082 130 aa1.46□□□□□ -2.18
YPT6YLR262C YLR173WQ06247 608 aa1.46□□□□□ -2.18
YPT6YLR262C PAM18Q07914 168 aa1.46□□□□□ -2.18
YPT6YLR262C RIB1P38066 345 aa1.45□□□□□ -2.18
YPT6YLR262C HAM1P47119 197 aaKnown RBP1.45□□□□□ -2.18
YPT6YLR262C USB1Q12208 290 aaKnown RBP1.45□□□□□ -2.18
YPT6YLR262C ATG31Q12421 196 aa1.45□□□□□ -2.18
YPT6YLR262C FLO9P39712 1322 aa1.44□□□□□ -2.18
YPT6YLR262C PET9P18239 318 aaKnown RBP1.44□□□□□ -2.18
YPT6YLR262C YBR063CP38083 404 aa1.44□□□□□ -2.18
YPT6YLR262C SPG3Q04398 127 aaPredicted RBP1.44□□□□□ -2.18
YPT6YLR262C YML096WQ04489 525 aa1.44□□□□□ -2.18
YPT6YLR262C SSQ1Q05931 657 aaPredicted RBP1.44□□□□□ -2.18
YPT6YLR262C CSI2Q08054 341 aa1.44□□□□□ -2.18
YPT6YLR262C YPR170W-BP0C5R9 85 aa1.43□□□□□ -2.18
YPT6YLR262C AVT2P39981 480 aa1.43□□□□□ -2.18
YPT6YLR262C ILM1P47155 203 aa1.43□□□□□ -2.18
YPT6YLR262C TRM9P49957 279 aa1.43□□□□□ -2.18
YPT6YLR262C ERV29P53337 310 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms