RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C SNO1Q03144 224 aa6.65□□□□□ -1.35
AVL9YLR114C PRS5Q12265 496 aaKnown RBP6.65□□□□□ -1.35
AVL9YLR114C FRE7Q12333 620 aa6.65□□□□□ -1.35
AVL9YLR114C YML003WP0CF16 290 aa6.64□□□□□ -1.35
AVL9YLR114C APA2P22108 325 aa6.64□□□□□ -1.35
AVL9YLR114C MKK2P32491 506 aa6.64□□□□□ -1.35
AVL9YLR114C YBL010CP32788 280 aa6.64□□□□□ -1.35
AVL9YLR114C RPL13BP40212 199 aaKnown RBP6.64□□□□□ -1.35
AVL9YLR114C UFD1P53044 361 aa6.64□□□□□ -1.35
AVL9YLR114C YPD1Q07688 167 aa6.64□□□□□ -1.35
AVL9YLR114C YCT1Q12235 531 aa6.64□□□□□ -1.35
AVL9YLR114C RPL13AQ12690 199 aaPredicted RBP6.64□□□□□ -1.35
AVL9YLR114C COS9P36034 407 aa6.64□□□□□ -1.35
AVL9YLR114C ASK10P48361 1146 aa6.64□□□□□ -1.35
AVL9YLR114C SOL1P50278 321 aa6.64□□□□□ -1.35
AVL9YLR114C SKP1P52286 194 aa6.64□□□□□ -1.35
AVL9YLR114C HAS1Q03532 505 aaKnown RBP6.64□□□□□ -1.35
AVL9YLR114C ERP1Q05359 219 aaKnown RBP6.64□□□□□ -1.35
AVL9YLR114C ZEO1Q08245 113 aa6.64□□□□□ -1.35
AVL9YLR114C RDL2Q08742 149 aaKnown RBP6.64□□□□□ -1.35
AVL9YLR114C ISA2Q12425 185 aa6.64□□□□□ -1.35
AVL9YLR114C YAL064W-BO13512 126 aa6.63□□□□□ -1.35
AVL9YLR114C PET494P07390 489 aaPredicted RBP6.63□□□□□ -1.35
AVL9YLR114C YKR073CP36153 106 aa6.63□□□□□ -1.35
AVL9YLR114C SHG1P38337 142 aa6.63□□□□□ -1.35
AVL9YLR114C PMT3P47190 753 aa6.63□□□□□ -1.35
AVL9YLR114C THI74Q04083 370 aa6.63□□□□□ -1.35
AVL9YLR114C YDL086WQ07505 273 aa6.63□□□□□ -1.35
AVL9YLR114C SWM1Q12379 170 aa6.63□□□□□ -1.35
AVL9YLR114C RPL17AP05740 184 aaKnown RBP6.62□□□□□ -1.35
AVL9YLR114C AFG1P32317 509 aa6.62□□□□□ -1.35
AVL9YLR114C YEA6P39953 335 aa6.62□□□□□ -1.35
AVL9YLR114C GTT1P40582 234 aa6.62□□□□□ -1.35
AVL9YLR114C GPI15P53961 229 aa6.62□□□□□ -1.35
AVL9YLR114C YDR102CQ03864 110 aa6.62□□□□□ -1.35
AVL9YLR114C NIP7Q08962 181 aaKnown RBP6.62□□□□□ -1.35
AVL9YLR114C YHR214C-EQ8TGK0 99 aa6.62□□□□□ -1.35
AVL9YLR114C UBA3Q99344 299 aa6.62□□□□□ -1.35
AVL9YLR114C GAL1P04385 528 aa6.62□□□□□ -1.35
AVL9YLR114C SED4P25365 1065 aa6.62□□□□□ -1.35
AVL9YLR114C FAT1P38225 669 aa6.62□□□□□ -1.35
AVL9YLR114C SPC25P40014 221 aa6.62□□□□□ -1.35
AVL9YLR114C GPP1P41277 250 aaKnown RBP6.62□□□□□ -1.35
AVL9YLR114C YJR011CP47086 261 aaPredicted RBP6.62□□□□□ -1.35
AVL9YLR114C SSN8P47821 323 aa6.62□□□□□ -1.35
AVL9YLR114C HSV2P50079 448 aaPredicted RBP6.62□□□□□ -1.35
AVL9YLR114C PKP2P53170 491 aa6.62□□□□□ -1.35
AVL9YLR114C SRP1Q02821 542 aaKnown RBP6.62□□□□□ -1.35
AVL9YLR114C COX19Q3E731 98 aa6.62□□□□□ -1.35
AVL9YLR114C POL2P21951 2222 aaKnown RBP6.62□□□□□ -1.35
AVL9YLR114C OLE1P21147 510 aaKnown RBP6.61□□□□□ -1.35
AVL9YLR114C PCL1P24867 279 aa6.61□□□□□ -1.35
AVL9YLR114C YJR056CP47115 236 aa6.61□□□□□ -1.35
AVL9YLR114C MOG1P47123 218 aa6.61□□□□□ -1.35
AVL9YLR114C GRE1Q08969 168 aa6.61□□□□□ -1.35
AVL9YLR114C YPR145C-AQ2V2P0 78 aa6.61□□□□□ -1.35
AVL9YLR114C BRR2P32639 2163 aaKnown RBP6.61□□□□□ -1.35
AVL9YLR114C SHM2P37291 469 aaKnown RBP6.61□□□□□ -1.35
AVL9YLR114C ATG8P38182 117 aaRIP-Chip data6.61□□□□□ -1.35not detected
AVL9YLR114C YBR197CP38306 217 aa6.61□□□□□ -1.35
AVL9YLR114C NSE4P43124 402 aa6.61□□□□□ -1.35
AVL9YLR114C VPS28Q02767 242 aa6.61□□□□□ -1.35
AVL9YLR114C LRS4Q04087 347 aaKnown RBP6.61□□□□□ -1.35
AVL9YLR114C YIL046W-AQ3E7Z4 54 aa6.61□□□□□ -1.35
AVL9YLR114C MES1P00958 751 aaKnown RBP6.6□□□□□ -1.35
AVL9YLR114C CDC36P06100 191 aaPredicted RBP6.6□□□□□ -1.35
AVL9YLR114C SPO7P18410 259 aa6.6□□□□□ -1.35
AVL9YLR114C YER010CP40011 234 aa6.6□□□□□ -1.35
AVL9YLR114C MOB2P43563 287 aa6.6□□□□□ -1.35
AVL9YLR114C CTK2P46962 323 aa6.6□□□□□ -1.35
AVL9YLR114C BSC5P53755 489 aa6.6□□□□□ -1.35
AVL9YLR114C MRX9Q07349 420 aaKnown RBP6.6□□□□□ -1.35
AVL9YLR114C BDS1Q08347 646 aa6.6□□□□□ -1.35
AVL9YLR114C SNF5P18480 905 aa6.6□□□□□ -1.35
AVL9YLR114C YHR210CP38893 341 aa6.6□□□□□ -1.35
AVL9YLR114C YEA4P40004 342 aa6.6□□□□□ -1.35
AVL9YLR114C XBP1P40489 647 aa6.6□□□□□ -1.35
AVL9YLR114C GNA1P43577 159 aaPredicted RBP6.6□□□□□ -1.35
AVL9YLR114C NIT2P47016 307 aa6.6□□□□□ -1.35
AVL9YLR114C GWT1P47026 490 aa6.6□□□□□ -1.35
AVL9YLR114C AVT4P50944 713 aa6.6□□□□□ -1.35
AVL9YLR114C NSA1P53136 463 aaPredicted RBP6.6□□□□□ -1.35
AVL9YLR114C MRPL22P53881 309 aa6.6□□□□□ -1.35
AVL9YLR114C HHT1P61830 136 aa6.6□□□□□ -1.35
AVL9YLR114C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
AVL9YLR114C YPL039WQ03080 316 aa6.6□□□□□ -1.35
AVL9YLR114C FIT1Q04433 528 aa6.6□□□□□ -1.35
AVL9YLR114C YMR253CQ04835 414 aa6.6□□□□□ -1.35
AVL9YLR114C COX5BP00425 151 aa6.59□□□□□ -1.35
AVL9YLR114C AIR1P40507 360 aaKnown RBP6.59□□□□□ -1.35
AVL9YLR114C MED4Q12343 284 aa6.59□□□□□ -1.35
AVL9YLR114C YMR084WA2P2R3 262 aa6.59□□□□□ -1.36
AVL9YLR114C CDC28P00546 298 aaKnown RBP6.59□□□□□ -1.36
AVL9YLR114C IRC24P40580 263 aa6.59□□□□□ -1.36
AVL9YLR114C TIM21P53220 239 aa6.59□□□□□ -1.36
AVL9YLR114C YIF1P53845 314 aaKnown RBP6.59□□□□□ -1.36
AVL9YLR114C ADD37Q03233 198 aa6.59□□□□□ -1.36
AVL9YLR114C MRPS17Q03246 237 aaPredicted RBP6.59□□□□□ -1.36
AVL9YLR114C TMA23Q03525 211 aa6.59□□□□□ -1.36
AVL9YLR114C ASM4Q05166 528 aa6.59□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms